EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000006639 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 11487 bases
Position: chrLZNR01005967.1:101701-113187
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000007750	MMR_HSR1	PF01926.23	2.2e-07	1	1
ENSUAMP00000007752	MMR_HSR1	PF01926.23	2.2e-07	1	1
ENSUAMP00000007730	MMR_HSR1	PF01926.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000008751	-	690	-	ENSUAMP00000007752	180 (aa)	-	-
ENSUAMT00000008729	-	621	-	ENSUAMP00000007730	206 (aa)	-	-
ENSUAMT00000008749	-	863	-	ENSUAMP00000007750	180 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000006639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000006639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000006639	-	81	34.694	ENSUAMG00000027527	-	84	36.552
ENSUAMG00000006639	-	88	40.491	ENSUAMG00000018967	RAB7A	78	40.491
ENSUAMG00000006639	-	91	39.157	ENSUAMG00000022667	RAB33B	74	39.306
ENSUAMG00000006639	-	93	69.461	ENSUAMG00000015697	RAB25	94	60.000
ENSUAMG00000006639	-	99	38.532	ENSUAMG00000027471	RAB5A	85	49.045
ENSUAMG00000006639	-	81	32.432	ENSUAMG00000008388	MRAS	80	33.333
ENSUAMG00000006639	-	99	41.667	ENSUAMG00000024343	RAB5C	89	41.667
ENSUAMG00000006639	-	87	42.857	ENSUAMG00000021018	-	86	39.106
ENSUAMG00000006639	-	99	90.244	ENSUAMG00000026548	RAB11A	97	90.244
ENSUAMG00000006639	-	88	48.447	ENSUAMG00000023026	RAB39B	80	47.059
ENSUAMG00000006639	-	85	34.615	ENSUAMG00000010578	RERG	81	33.537
ENSUAMG00000006639	-	86	30.189	ENSUAMG00000009585	DNAJC27	58	30.189
ENSUAMG00000006639	-	98	38.614	ENSUAMG00000009326	RAB30	93	38.614
ENSUAMG00000006639	-	87	43.671	ENSUAMG00000018092	RAB12	82	37.681
ENSUAMG00000006639	-	92	53.939	ENSUAMG00000003164	RAB14	77	53.939
ENSUAMG00000006639	-	87	42.857	ENSUAMG00000028103	-	86	39.106
ENSUAMG00000006639	-	87	35.669	ENSUAMG00000015761	-	68	35.669
ENSUAMG00000006639	-	98	31.731	ENSUAMG00000010975	RAB36	62	31.731
ENSUAMG00000006639	-	85	35.000	ENSUAMG00000005003	RAB34	60	35.000
ENSUAMG00000006639	-	88	42.262	ENSUAMG00000018451	RAB9B	83	42.262
ENSUAMG00000006639	-	99	43.137	ENSUAMG00000014651	RAB5B	90	43.137
ENSUAMG00000006639	-	63	32.203	ENSUAMG00000017970	ARL4D	57	32.203
ENSUAMG00000006639	-	66	30.894	ENSUAMG00000009218	ARL4A	60	30.894
ENSUAMG00000006639	-	86	42.500	ENSUAMG00000023005	RAB33A	74	39.888
ENSUAMG00000006639	-	98	46.305	ENSUAMG00000021114	RAB1B	95	46.305
ENSUAMG00000006639	-	81	34.014	ENSUAMG00000016388	KRAS	84	35.625
ENSUAMG00000006639	-	90	37.037	ENSUAMG00000013367	RAB23	76	36.813

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000006639	-	99	97.073	ENSAPOG00000023455	rab11bb	94	97.073	Acanthochromis_polyacanthus
ENSUAMG00000006639	-	99	97.561	ENSACIG00000024376	-	94	97.561	Amphilophus_citrinellus
ENSUAMG00000006639	-	99	83.902	ENSACIG00000019631	rab11bb	93	83.902	Amphilophus_citrinellus
ENSUAMG00000006639	-	99	97.561	ENSAOCG00000018849	-	94	97.561	Amphiprion_ocellaris
ENSUAMG00000006639	-	99	97.073	ENSAOCG00000018239	rab11bb	94	97.073	Amphiprion_ocellaris
ENSUAMG00000006639	-	99	97.073	ENSAPEG00000016590	rab11bb	94	97.073	Amphiprion_percula
ENSUAMG00000006639	-	99	97.073	ENSATEG00000023725	-	94	97.073	Anabas_testudineus
ENSUAMG00000006639	-	99	97.073	ENSATEG00000017696	rab11bb	94	97.073	Anabas_testudineus
ENSUAMG00000006639	-	99	98.537	ENSAPLG00000011046	-	94	98.537	Anas_platyrhynchos
ENSUAMG00000006639	-	99	97.561	ENSACLG00000005446	-	94	97.561	Astatotilapia_calliptera
ENSUAMG00000006639	-	99	97.073	ENSACLG00000007076	rab11bb	94	97.073	Astatotilapia_calliptera
ENSUAMG00000006639	-	99	96.585	ENSAMXG00000037623	-	94	96.585	Astyanax_mexicanus
ENSUAMG00000006639	-	99	98.537	ENSAMXG00000042655	rab11bb	94	98.537	Astyanax_mexicanus
ENSUAMG00000006639	-	99	100.000	ENSBTAG00000002475	RAB11B	94	100.000	Bos_taurus
ENSUAMG00000006639	-	99	99.512	ENSCHIG00000022426	-	92	99.512	Capra_hircus
ENSUAMG00000006639	-	99	100.000	ENSCATG00000029188	-	94	100.000	Cercocebus_atys
ENSUAMG00000006639	-	99	98.537	ENSCPBG00000017056	-	94	98.537	Chrysemys_picta_bellii
ENSUAMG00000006639	-	99	97.073	ENSCSEG00000007239	-	94	97.073	Cynoglossus_semilaevis
ENSUAMG00000006639	-	99	97.073	ENSCSEG00000012149	rab11bb	94	97.073	Cynoglossus_semilaevis
ENSUAMG00000006639	-	97	96.552	ENSCVAG00000019751	-	94	94.146	Cyprinodon_variegatus
ENSUAMG00000006639	-	99	97.073	ENSCVAG00000017021	-	94	97.073	Cyprinodon_variegatus
ENSUAMG00000006639	-	99	96.585	ENSCVAG00000019718	-	94	96.585	Cyprinodon_variegatus
ENSUAMG00000006639	-	99	98.049	ENSDARG00000090086	rab11bb	94	98.049	Danio_rerio
ENSUAMG00000006639	-	99	99.512	ENSETEG00000000905	-	94	99.512	Echinops_telfairi
ENSUAMG00000006639	-	100	98.544	ENSEASG00005003708	-	95	98.544	Equus_asinus_asinus
ENSUAMG00000006639	-	100	98.544	ENSECAG00000000716	RAB11B	95	98.544	Equus_caballus
ENSUAMG00000006639	-	99	97.073	ENSELUG00000021148	rab11bb	94	97.073	Esox_lucius
ENSUAMG00000006639	-	99	96.098	ENSELUG00000000916	-	92	98.438	Esox_lucius
ENSUAMG00000006639	-	99	96.585	ENSELUG00000020948	-	98	97.656	Esox_lucius
ENSUAMG00000006639	-	99	98.537	ENSFALG00000011828	-	94	98.537	Ficedula_albicollis
ENSUAMG00000006639	-	99	97.073	ENSFHEG00000018353	rab11bb	94	97.073	Fundulus_heteroclitus
ENSUAMG00000006639	-	99	97.073	ENSFHEG00000022676	-	94	97.073	Fundulus_heteroclitus
ENSUAMG00000006639	-	99	97.073	ENSGMOG00000009211	rab11bb	94	97.073	Gadus_morhua
ENSUAMG00000006639	-	99	93.596	ENSGMOG00000009668	-	93	93.596	Gadus_morhua
ENSUAMG00000006639	-	99	98.537	ENSGALG00000000613	RAB11B	94	98.537	Gallus_gallus
ENSUAMG00000006639	-	99	97.073	ENSGAFG00000007102	rab11bb	94	97.073	Gambusia_affinis
ENSUAMG00000006639	-	99	96.585	ENSGACG00000015479	rab11bb	94	96.585	Gasterosteus_aculeatus
ENSUAMG00000006639	-	99	94.146	ENSGACG00000013297	-	93	94.146	Gasterosteus_aculeatus
ENSUAMG00000006639	-	99	100.000	ENSGGOG00000014516	RAB11B	94	100.000	Gorilla_gorilla
ENSUAMG00000006639	-	99	97.073	ENSHBUG00000014777	rab11bb	94	97.073	Haplochromis_burtoni
ENSUAMG00000006639	-	99	97.561	ENSHBUG00000009947	-	94	97.561	Haplochromis_burtoni
ENSUAMG00000006639	-	100	93.689	ENSHCOG00000000954	-	97	94.608	Hippocampus_comes
ENSUAMG00000006639	-	99	92.683	ENSHCOG00000000985	-	94	92.683	Hippocampus_comes
ENSUAMG00000006639	-	100	96.602	ENSHCOG00000002423	rab11bb	94	97.561	Hippocampus_comes
ENSUAMG00000006639	-	100	96.602	ENSIPUG00000025100	rab11b	94	97.073	Ictalurus_punctatus
ENSUAMG00000006639	-	99	98.049	ENSIPUG00000019927	rab11bb	94	98.049	Ictalurus_punctatus
ENSUAMG00000006639	-	99	97.073	ENSKMAG00000009033	rab11bb	94	97.073	Kryptolebias_marmoratus
ENSUAMG00000006639	-	99	97.561	ENSKMAG00000006170	-	94	97.561	Kryptolebias_marmoratus
ENSUAMG00000006639	-	99	96.585	ENSLBEG00000015248	rab11bb	94	96.585	Labrus_bergylta
ENSUAMG00000006639	-	99	97.073	ENSLBEG00000004172	-	94	97.073	Labrus_bergylta
ENSUAMG00000006639	-	99	89.268	ENSLBEG00000005981	-	94	89.268	Labrus_bergylta
ENSUAMG00000006639	-	99	98.537	ENSLACG00000016857	-	94	98.537	Latimeria_chalumnae
ENSUAMG00000006639	-	99	100.000	ENSMFAG00000003654	RAB11B	94	100.000	Macaca_fascicularis
ENSUAMG00000006639	-	99	100.000	ENSMLEG00000030601	-	94	100.000	Mandrillus_leucophaeus
ENSUAMG00000006639	-	99	96.098	ENSMAMG00000018533	-	94	96.098	Mastacembelus_armatus
ENSUAMG00000006639	-	99	96.585	ENSMAMG00000006378	rab11bb	94	96.585	Mastacembelus_armatus
ENSUAMG00000006639	-	99	97.073	ENSMZEG00005003352	rab11bb	94	97.073	Maylandia_zebra
ENSUAMG00000006639	-	99	97.561	ENSMZEG00005010975	-	94	97.561	Maylandia_zebra
ENSUAMG00000006639	-	99	100.000	ENSMICG00000034065	-	94	100.000	Microcebus_murinus
ENSUAMG00000006639	-	99	97.073	ENSMMOG00000007917	rab11bb	100	97.073	Mola_mola
ENSUAMG00000006639	-	99	97.561	ENSMMOG00000001250	-	94	97.561	Mola_mola
ENSUAMG00000006639	-	97	97.126	ENSMMOG00000001238	-	94	95.098	Mola_mola
ENSUAMG00000006639	-	99	98.537	ENSMODG00000003841	-	94	98.537	Monodelphis_domestica
ENSUAMG00000006639	-	99	97.073	ENSMALG00000022187	rab11bb	94	97.073	Monopterus_albus
ENSUAMG00000006639	-	99	90.821	ENSMLUG00000006677	-	100	90.821	Myotis_lucifugus
ENSUAMG00000006639	-	99	97.073	ENSNBRG00000000372	rab11bb	94	97.073	Neolamprologus_brichardi
ENSUAMG00000006639	-	99	97.561	ENSNBRG00000023885	-	94	97.561	Neolamprologus_brichardi
ENSUAMG00000006639	-	99	98.537	ENSMEUG00000003686	-	94	98.537	Notamacropus_eugenii
ENSUAMG00000006639	-	99	97.561	ENSONIG00000002544	-	94	97.561	Oreochromis_niloticus
ENSUAMG00000006639	-	99	97.073	ENSONIG00000010435	rab11bb	94	97.073	Oreochromis_niloticus
ENSUAMG00000006639	-	61	97.248	ENSOANG00000031567	-	77	99.065	Ornithorhynchus_anatinus
ENSUAMG00000006639	-	99	96.569	ENSORLG00000015284	-	68	96.569	Oryzias_latipes
ENSUAMG00000006639	-	99	96.585	ENSORLG00000013938	rab11bb	94	96.585	Oryzias_latipes
ENSUAMG00000006639	-	99	96.585	ENSORLG00020019393	rab11bb	94	96.585	Oryzias_latipes_hni
ENSUAMG00000006639	-	99	96.569	ENSORLG00020020844	RAB11B	94	96.569	Oryzias_latipes_hni
ENSUAMG00000006639	-	99	96.585	ENSORLG00015020173	rab11bb	94	96.585	Oryzias_latipes_hsok
ENSUAMG00000006639	-	99	96.569	ENSORLG00015016999	RAB11B	94	96.569	Oryzias_latipes_hsok
ENSUAMG00000006639	-	99	97.073	ENSOMEG00000017806	-	94	97.073	Oryzias_melastigma
ENSUAMG00000006639	-	99	97.561	ENSOMEG00000002562	-	94	97.561	Oryzias_melastigma
ENSUAMG00000006639	-	99	100.000	ENSPPAG00000028589	-	94	100.000	Pan_paniscus
ENSUAMG00000006639	-	99	100.000	ENSPTRG00000010422	RAB11B	94	100.000	Pan_troglodytes
ENSUAMG00000006639	-	99	100.000	ENSPANG00000007765	-	94	100.000	Papio_anubis
ENSUAMG00000006639	-	99	97.561	ENSPKIG00000011703	-	94	97.561	Paramormyrops_kingsleyae
ENSUAMG00000006639	-	99	97.073	ENSPKIG00000011640	rab11bb	94	97.073	Paramormyrops_kingsleyae
ENSUAMG00000006639	-	98	97.512	ENSPKIG00000001389	-	65	97.512	Paramormyrops_kingsleyae
ENSUAMG00000006639	-	99	95.735	ENSPSIG00000010242	-	82	95.735	Pelodiscus_sinensis
ENSUAMG00000006639	-	99	95.610	ENSPMGG00000014333	-	94	95.610	Periophthalmus_magnuspinnatus
ENSUAMG00000006639	-	97	94.828	ENSPMGG00000014336	-	94	92.647	Periophthalmus_magnuspinnatus
ENSUAMG00000006639	-	99	97.073	ENSPMGG00000009435	rab11bb	94	97.073	Periophthalmus_magnuspinnatus
ENSUAMG00000006639	-	99	98.049	ENSPCIG00000020371	-	95	98.049	Phascolarctos_cinereus
ENSUAMG00000006639	-	99	97.073	ENSPFOG00000024114	-	94	97.073	Poecilia_formosa
ENSUAMG00000006639	-	99	97.561	ENSPFOG00000006224	-	94	97.561	Poecilia_formosa
ENSUAMG00000006639	-	99	97.561	ENSPLAG00000014207	-	94	97.561	Poecilia_latipinna
ENSUAMG00000006639	-	99	97.073	ENSPLAG00000001598	rab11bb	94	97.073	Poecilia_latipinna
ENSUAMG00000006639	-	99	97.073	ENSPMEG00000012389	rab11bb	94	97.073	Poecilia_mexicana
ENSUAMG00000006639	-	99	97.561	ENSPMEG00000007842	-	94	97.561	Poecilia_mexicana
ENSUAMG00000006639	-	99	97.073	ENSPREG00000014269	rab11bb	94	97.073	Poecilia_reticulata
ENSUAMG00000006639	-	99	97.073	ENSPREG00000006336	-	94	97.073	Poecilia_reticulata
ENSUAMG00000006639	-	99	97.073	ENSPNYG00000004098	rab11bb	94	97.073	Pundamilia_nyererei
ENSUAMG00000006639	-	99	97.561	ENSPNYG00000019611	-	94	97.561	Pundamilia_nyererei
ENSUAMG00000006639	-	99	100.000	ENSRROG00000037812	-	94	100.000	Rhinopithecus_roxellana
ENSUAMG00000006639	-	99	98.537	ENSSHAG00000006816	-	94	98.537	Sarcophilus_harrisii
ENSUAMG00000006639	-	99	97.561	ENSSFOG00015009042	rab11bb	94	97.561	Scleropages_formosus
ENSUAMG00000006639	-	99	72.195	ENSSFOG00015006245	-	94	72.195	Scleropages_formosus
ENSUAMG00000006639	-	99	93.659	ENSSMAG00000018613	-	94	93.659	Scophthalmus_maximus
ENSUAMG00000006639	-	99	96.585	ENSSMAG00000004922	rab11bb	94	96.585	Scophthalmus_maximus
ENSUAMG00000006639	-	99	97.561	ENSSDUG00000002934	-	94	97.561	Seriola_dumerili
ENSUAMG00000006639	-	99	97.073	ENSSDUG00000013558	rab11bb	94	97.073	Seriola_dumerili
ENSUAMG00000006639	-	99	97.561	ENSSLDG00000005275	-	94	97.561	Seriola_lalandi_dorsalis
ENSUAMG00000006639	-	99	97.073	ENSSLDG00000020676	rab11bb	94	97.073	Seriola_lalandi_dorsalis
ENSUAMG00000006639	-	99	98.049	ENSSPUG00000002243	-	94	98.049	Sphenodon_punctatus
ENSUAMG00000006639	-	99	97.073	ENSSPAG00000011419	rab11bb	94	97.073	Stegastes_partitus
ENSUAMG00000006639	-	99	97.561	ENSSPAG00000014559	-	94	97.561	Stegastes_partitus
ENSUAMG00000006639	-	99	98.537	ENSTGUG00000000084	-	94	98.537	Taeniopygia_guttata
ENSUAMG00000006639	-	99	97.537	ENSTRUG00000021619	-	94	97.537	Takifugu_rubripes
ENSUAMG00000006639	-	97	97.126	ENSTRUG00000021614	-	94	94.118	Takifugu_rubripes
ENSUAMG00000006639	-	99	97.073	ENSTRUG00000022029	rab11bb	94	97.073	Takifugu_rubripes
ENSUAMG00000006639	-	99	96.098	ENSTNIG00000011081	rab11bb	94	96.098	Tetraodon_nigroviridis
ENSUAMG00000006639	-	97	97.126	ENSTNIG00000013184	-	94	93.627	Tetraodon_nigroviridis
ENSUAMG00000006639	-	99	97.537	ENSTNIG00000013182	-	94	97.537	Tetraodon_nigroviridis
ENSUAMG00000006639	-	99	95.074	ENSTNIG00000002003	-	100	95.074	Tetraodon_nigroviridis
ENSUAMG00000006639	-	99	98.049	ENSXETG00000025484	rab11b.1	93	98.049	Xenopus_tropicalis
ENSUAMG00000006639	-	99	97.561	ENSXCOG00000009190	-	94	97.561	Xiphophorus_couchianus
ENSUAMG00000006639	-	99	97.073	ENSXCOG00000008042	-	94	97.073	Xiphophorus_couchianus
ENSUAMG00000006639	-	99	97.073	ENSXMAG00000024840	-	94	97.073	Xiphophorus_maculatus
ENSUAMG00000006639	-	99	97.073	ENSXMAG00000011926	rab11bb	94	97.073	Xiphophorus_maculatus