EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000006750 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 22962 bases
Position: chrLZNR01000232.1:413476-436437
Accession: 10765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000007875	PRP21_like_P	PF12230.8	1e-51	1	1
ENSUAMP00000007876	PRP21_like_P	PF12230.8	1e-51	1	1
ENSUAMP00000007875	Surp	PF01805.20	7.8e-46	1	2
ENSUAMP00000007875	Surp	PF01805.20	7.8e-46	2	2
ENSUAMP00000007876	Surp	PF01805.20	7.8e-46	1	2
ENSUAMP00000007876	Surp	PF01805.20	7.8e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000008889	SF3A1-201	3112	-	ENSUAMP00000007875	795 (aa)	-	-
ENSUAMT00000008890	SF3A1-202	3112	-	ENSUAMP00000007876	795 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000006750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000006750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000006750	SF3A1	99	97.840	ENSG00000099995	SF3A1	99	97.840	Homo_sapiens
ENSUAMG00000006750	SF3A1	99	82.510	ENSAPOG00000020465	sf3a1	99	83.016	Acanthochromis_polyacanthus
ENSUAMG00000006750	SF3A1	99	98.099	ENSAMEG00000007737	SF3A1	99	98.099	Ailuropoda_melanoleuca
ENSUAMG00000006750	SF3A1	99	83.270	ENSACIG00000020672	sf3a1	99	82.890	Amphilophus_citrinellus
ENSUAMG00000006750	SF3A1	99	82.242	ENSAOCG00000003060	sf3a1	99	82.746	Amphiprion_ocellaris
ENSUAMG00000006750	SF3A1	99	82.368	ENSAPEG00000010735	sf3a1	99	82.872	Amphiprion_percula
ENSUAMG00000006750	SF3A1	95	84.908	ENSATEG00000021201	sf3a1	98	83.697	Anabas_testudineus
ENSUAMG00000006750	SF3A1	94	93.342	ENSAPLG00000009057	SF3A1	99	92.458	Anas_platyrhynchos
ENSUAMG00000006750	SF3A1	99	84.864	ENSACAG00000009415	SF3A1	99	86.228	Anolis_carolinensis
ENSUAMG00000006750	SF3A1	99	97.967	ENSANAG00000032045	SF3A1	99	97.967	Aotus_nancymaae
ENSUAMG00000006750	SF3A1	99	83.354	ENSACLG00000012622	sf3a1	99	83.228	Astatotilapia_calliptera
ENSUAMG00000006750	SF3A1	98	82.714	ENSAMXG00000005382	sf3a1	99	82.843	Astyanax_mexicanus
ENSUAMG00000006750	SF3A1	99	98.475	ENSBTAG00000003390	SF3A1	99	98.475	Bos_taurus
ENSUAMG00000006750	SF3A1	83	43.447	WBGene00004188	prp-21	93	43.502	Caenorhabditis_elegans
ENSUAMG00000006750	SF3A1	99	98.094	ENSCJAG00000010370	SF3A1	99	98.094	Callithrix_jacchus
ENSUAMG00000006750	SF3A1	99	98.729	ENSCAFG00000012559	SF3A1	99	98.729	Canis_familiaris
ENSUAMG00000006750	SF3A1	99	98.729	ENSCAFG00020000838	SF3A1	99	98.729	Canis_lupus_dingo
ENSUAMG00000006750	SF3A1	99	98.348	ENSCHIG00000018642	SF3A1	99	98.348	Capra_hircus
ENSUAMG00000006750	SF3A1	99	98.094	ENSTSYG00000004739	SF3A1	99	98.094	Carlito_syrichta
ENSUAMG00000006750	SF3A1	94	81.175	ENSCAPG00000015414	SF3A1	98	81.175	Cavia_aperea
ENSUAMG00000006750	SF3A1	99	97.840	ENSCPOG00000014589	SF3A1	99	97.840	Cavia_porcellus
ENSUAMG00000006750	SF3A1	99	97.967	ENSCCAG00000032006	SF3A1	99	97.967	Cebus_capucinus
ENSUAMG00000006750	SF3A1	99	98.221	ENSCATG00000029241	SF3A1	99	98.221	Cercocebus_atys
ENSUAMG00000006750	SF3A1	99	97.205	ENSCLAG00000006508	SF3A1	99	97.205	Chinchilla_lanigera
ENSUAMG00000006750	SF3A1	99	98.094	ENSCSAG00000009470	SF3A1	99	98.094	Chlorocebus_sabaeus
ENSUAMG00000006750	SF3A1	61	99.262	ENSCHOG00000005201	SF3A1	69	99.262	Choloepus_hoffmanni
ENSUAMG00000006750	SF3A1	99	90.102	ENSCPBG00000007595	SF3A1	99	90.228	Chrysemys_picta_bellii
ENSUAMG00000006750	SF3A1	93	51.600	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSUAMG00000006750	SF3A1	95	50.975	ENSCSAVG00000005608	-	91	58.929	Ciona_savignyi
ENSUAMG00000006750	SF3A1	99	98.094	ENSCANG00000033564	SF3A1	99	98.094	Colobus_angolensis_palliatus
ENSUAMG00000006750	SF3A1	99	97.459	ENSCGRG00001008933	Sf3a1	99	97.459	Cricetulus_griseus_chok1gshd
ENSUAMG00000006750	SF3A1	99	97.459	ENSCGRG00000006127	Sf3a1	99	97.459	Cricetulus_griseus_crigri
ENSUAMG00000006750	SF3A1	98	81.074	ENSCSEG00000010792	sf3a1	99	80.691	Cynoglossus_semilaevis
ENSUAMG00000006750	SF3A1	99	82.003	ENSCVAG00000004560	sf3a1	99	81.749	Cyprinodon_variegatus
ENSUAMG00000006750	SF3A1	99	81.392	ENSDARG00000041887	sf3a1	99	81.772	Danio_rerio
ENSUAMG00000006750	SF3A1	99	98.099	ENSDNOG00000010629	SF3A1	99	98.099	Dasypus_novemcinctus
ENSUAMG00000006750	SF3A1	99	97.967	ENSDORG00000005613	Sf3a1	99	97.967	Dipodomys_ordii
ENSUAMG00000006750	SF3A1	78	61.495	FBgn0266917	Sf3a1	85	58.897	Drosophila_melanogaster
ENSUAMG00000006750	SF3A1	84	97.156	ENSETEG00000017194	SF3A1	100	94.729	Echinops_telfairi
ENSUAMG00000006750	SF3A1	99	64.218	ENSEBUG00000001285	sf3a1	99	64.910	Eptatretus_burgeri
ENSUAMG00000006750	SF3A1	99	98.348	ENSEASG00005010254	SF3A1	99	98.348	Equus_asinus_asinus
ENSUAMG00000006750	SF3A1	99	98.348	ENSECAG00000023962	SF3A1	99	98.348	Equus_caballus
ENSUAMG00000006750	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSUAMG00000006750	SF3A1	99	81.439	ENSELUG00000022578	sf3a1	99	80.958	Esox_lucius
ENSUAMG00000006750	SF3A1	99	98.729	ENSFCAG00000011932	SF3A1	99	98.729	Felis_catus
ENSUAMG00000006750	SF3A1	94	92.267	ENSFALG00000006944	SF3A1	99	90.863	Ficedula_albicollis
ENSUAMG00000006750	SF3A1	99	97.713	ENSFDAG00000009560	SF3A1	99	97.713	Fukomys_damarensis
ENSUAMG00000006750	SF3A1	99	83.016	ENSFHEG00000010866	sf3a1	99	82.510	Fundulus_heteroclitus
ENSUAMG00000006750	SF3A1	99	80.076	ENSGMOG00000016024	sf3a1	99	78.616	Gadus_morhua
ENSUAMG00000006750	SF3A1	94	93.333	ENSGALG00000007937	SF3A1	99	91.497	Gallus_gallus
ENSUAMG00000006750	SF3A1	98	82.458	ENSGAFG00000009111	sf3a1	99	81.622	Gambusia_affinis
ENSUAMG00000006750	SF3A1	99	81.218	ENSGACG00000011893	sf3a1	99	80.584	Gasterosteus_aculeatus
ENSUAMG00000006750	SF3A1	96	91.064	ENSGAGG00000000762	SF3A1	99	91.196	Gopherus_agassizii
ENSUAMG00000006750	SF3A1	99	97.840	ENSGGOG00000012631	SF3A1	99	97.840	Gorilla_gorilla
ENSUAMG00000006750	SF3A1	99	83.354	ENSHBUG00000015795	sf3a1	99	83.228	Haplochromis_burtoni
ENSUAMG00000006750	SF3A1	99	97.967	ENSHGLG00000007907	SF3A1	99	97.967	Heterocephalus_glaber_female
ENSUAMG00000006750	SF3A1	99	97.967	ENSHGLG00100013799	SF3A1	99	97.967	Heterocephalus_glaber_male
ENSUAMG00000006750	SF3A1	99	79.341	ENSHCOG00000015423	sf3a1	99	78.580	Hippocampus_comes
ENSUAMG00000006750	SF3A1	95	81.627	ENSIPUG00000002470	sf3a1	98	81.890	Ictalurus_punctatus
ENSUAMG00000006750	SF3A1	99	98.094	ENSSTOG00000013892	SF3A1	99	98.094	Ictidomys_tridecemlineatus
ENSUAMG00000006750	SF3A1	99	97.843	ENSJJAG00000022566	Sf3a1	99	97.843	Jaculus_jaculus
ENSUAMG00000006750	SF3A1	99	81.749	ENSKMAG00000002400	sf3a1	99	81.876	Kryptolebias_marmoratus
ENSUAMG00000006750	SF3A1	99	81.369	ENSLBEG00000022974	sf3a1	99	80.862	Labrus_bergylta
ENSUAMG00000006750	SF3A1	99	86.220	ENSLACG00000003565	SF3A1	99	86.094	Latimeria_chalumnae
ENSUAMG00000006750	SF3A1	99	84.217	ENSLOCG00000008251	sf3a1	99	84.091	Lepisosteus_oculatus
ENSUAMG00000006750	SF3A1	98	60.660	ENSLAFG00000026032	-	98	60.787	Loxodonta_africana
ENSUAMG00000006750	SF3A1	99	97.840	ENSLAFG00000000448	SF3A1	99	97.840	Loxodonta_africana
ENSUAMG00000006750	SF3A1	99	97.967	ENSMFAG00000031979	SF3A1	99	97.967	Macaca_fascicularis
ENSUAMG00000006750	SF3A1	99	97.967	ENSMMUG00000005547	SF3A1	99	97.967	Macaca_mulatta
ENSUAMG00000006750	SF3A1	99	97.840	ENSMNEG00000037229	SF3A1	99	97.840	Macaca_nemestrina
ENSUAMG00000006750	SF3A1	99	98.094	ENSMLEG00000041908	SF3A1	99	98.094	Mandrillus_leucophaeus
ENSUAMG00000006750	SF3A1	96	84.746	ENSMAMG00000006460	sf3a1	96	84.876	Mastacembelus_armatus
ENSUAMG00000006750	SF3A1	99	83.354	ENSMZEG00005009633	sf3a1	99	83.228	Maylandia_zebra
ENSUAMG00000006750	SF3A1	94	93.333	ENSMGAG00000001330	SF3A1	99	92.448	Meleagris_gallopavo
ENSUAMG00000006750	SF3A1	91	94.077	ENSMAUG00000020317	Sf3a1	99	89.975	Mesocricetus_auratus
ENSUAMG00000006750	SF3A1	99	97.967	ENSMICG00000010038	SF3A1	99	97.967	Microcebus_murinus
ENSUAMG00000006750	SF3A1	99	97.586	ENSMOCG00000008438	Sf3a1	99	97.586	Microtus_ochrogaster
ENSUAMG00000006750	SF3A1	99	80.735	ENSMMOG00000015588	sf3a1	98	80.101	Mola_mola
ENSUAMG00000006750	SF3A1	99	96.696	ENSMODG00000009270	SF3A1	99	96.696	Monodelphis_domestica
ENSUAMG00000006750	SF3A1	99	83.503	ENSMALG00000000148	sf3a1	98	85.027	Monopterus_albus
ENSUAMG00000006750	SF3A1	99	97.078	MGP_CAROLIEiJ_G0016029	Sf3a1	99	97.078	Mus_caroli
ENSUAMG00000006750	SF3A1	99	97.078	ENSMUSG00000002129	Sf3a1	99	97.078	Mus_musculus
ENSUAMG00000006750	SF3A1	99	96.950	MGP_PahariEiJ_G0016862	Sf3a1	99	96.950	Mus_pahari
ENSUAMG00000006750	SF3A1	99	97.078	MGP_SPRETEiJ_G0016870	Sf3a1	99	97.078	Mus_spretus
ENSUAMG00000006750	SF3A1	99	98.475	ENSMPUG00000013144	SF3A1	99	98.475	Mustela_putorius_furo
ENSUAMG00000006750	SF3A1	99	98.094	ENSMLUG00000002139	SF3A1	99	98.094	Myotis_lucifugus
ENSUAMG00000006750	SF3A1	99	97.840	ENSNGAG00000016977	Sf3a1	99	97.840	Nannospalax_galili
ENSUAMG00000006750	SF3A1	99	82.767	ENSNBRG00000016642	sf3a1	99	82.642	Neolamprologus_brichardi
ENSUAMG00000006750	SF3A1	99	98.094	ENSNLEG00000003686	SF3A1	99	98.094	Nomascus_leucogenys
ENSUAMG00000006750	SF3A1	96	87.632	ENSMEUG00000008741	SF3A1	100	87.632	Notamacropus_eugenii
ENSUAMG00000006750	SF3A1	99	97.332	ENSOPRG00000016636	SF3A1	99	97.332	Ochotona_princeps
ENSUAMG00000006750	SF3A1	99	97.840	ENSODEG00000002571	SF3A1	99	97.840	Octodon_degus
ENSUAMG00000006750	SF3A1	99	83.249	ENSONIG00000010848	sf3a1	99	82.620	Oreochromis_niloticus
ENSUAMG00000006750	SF3A1	99	97.713	ENSOCUG00000007633	SF3A1	99	97.713	Oryctolagus_cuniculus
ENSUAMG00000006750	SF3A1	96	81.759	ENSORLG00000013050	sf3a1	99	82.415	Oryzias_latipes
ENSUAMG00000006750	SF3A1	96	82.546	ENSORLG00020003236	sf3a1	95	82.546	Oryzias_latipes_hni
ENSUAMG00000006750	SF3A1	99	81.115	ENSORLG00015017411	sf3a1	99	81.622	Oryzias_latipes_hsok
ENSUAMG00000006750	SF3A1	99	81.749	ENSOMEG00000013362	sf3a1	99	81.496	Oryzias_melastigma
ENSUAMG00000006750	SF3A1	99	97.586	ENSOGAG00000012931	SF3A1	99	97.586	Otolemur_garnettii
ENSUAMG00000006750	SF3A1	99	96.569	ENSOARG00000006849	SF3A1	99	96.569	Ovis_aries
ENSUAMG00000006750	SF3A1	99	96.823	ENSPPAG00000041790	SF3A1	99	96.823	Pan_paniscus
ENSUAMG00000006750	SF3A1	99	98.729	ENSPPRG00000004391	SF3A1	99	98.729	Panthera_pardus
ENSUAMG00000006750	SF3A1	96	98.825	ENSPTIG00000000844	SF3A1	99	98.825	Panthera_tigris_altaica
ENSUAMG00000006750	SF3A1	99	97.840	ENSPTRG00000014240	SF3A1	99	97.840	Pan_troglodytes
ENSUAMG00000006750	SF3A1	99	98.094	ENSPANG00000020772	SF3A1	99	98.094	Papio_anubis
ENSUAMG00000006750	SF3A1	82	90.845	ENSPSIG00000012803	SF3A1	95	94.162	Pelodiscus_sinensis
ENSUAMG00000006750	SF3A1	95	83.245	ENSPMGG00000023096	sf3a1	99	83.245	Periophthalmus_magnuspinnatus
ENSUAMG00000006750	SF3A1	99	97.713	ENSPEMG00000009494	Sf3a1	99	97.713	Peromyscus_maniculatus_bairdii
ENSUAMG00000006750	SF3A1	69	78.040	ENSPMAG00000007139	-	93	76.354	Petromyzon_marinus
ENSUAMG00000006750	SF3A1	99	96.442	ENSPCIG00000022692	SF3A1	99	96.442	Phascolarctos_cinereus
ENSUAMG00000006750	SF3A1	99	74.177	ENSPFOG00000016768	sf3a1	99	73.418	Poecilia_formosa
ENSUAMG00000006750	SF3A1	99	82.532	ENSPLAG00000017268	sf3a1	99	82.025	Poecilia_latipinna
ENSUAMG00000006750	SF3A1	83	84.802	ENSPMEG00000019811	sf3a1	97	84.043	Poecilia_mexicana
ENSUAMG00000006750	SF3A1	99	82.658	ENSPREG00000010347	sf3a1	99	82.405	Poecilia_reticulata
ENSUAMG00000006750	SF3A1	99	98.094	ENSPPYG00000011707	SF3A1	99	98.094	Pongo_abelii
ENSUAMG00000006750	SF3A1	56	98.755	ENSPCAG00000003266	SF3A1	56	98.755	Procavia_capensis
ENSUAMG00000006750	SF3A1	99	98.221	ENSPCOG00000026630	SF3A1	99	98.221	Propithecus_coquereli
ENSUAMG00000006750	SF3A1	99	94.409	ENSPVAG00000017719	SF3A1	99	94.409	Pteropus_vampyrus
ENSUAMG00000006750	SF3A1	99	83.354	ENSPNYG00000018706	sf3a1	99	83.228	Pundamilia_nyererei
ENSUAMG00000006750	SF3A1	98	83.036	ENSPNAG00000003721	sf3a1	98	83.829	Pygocentrus_nattereri
ENSUAMG00000006750	SF3A1	99	97.078	ENSRNOG00000005218	Sf3a1	99	97.078	Rattus_norvegicus
ENSUAMG00000006750	SF3A1	99	97.967	ENSRBIG00000032167	SF3A1	99	97.967	Rhinopithecus_bieti
ENSUAMG00000006750	SF3A1	99	97.967	ENSRROG00000044908	SF3A1	99	97.967	Rhinopithecus_roxellana
ENSUAMG00000006750	SF3A1	96	94.141	ENSSBOG00000021960	SF3A1	99	98.212	Saimiri_boliviensis_boliviensis
ENSUAMG00000006750	SF3A1	96	94.133	ENSSHAG00000003666	SF3A1	97	94.133	Sarcophilus_harrisii
ENSUAMG00000006750	SF3A1	99	82.494	ENSSFOG00015004579	sf3a1	99	83.123	Scleropages_formosus
ENSUAMG00000006750	SF3A1	98	81.050	ENSSMAG00000004275	sf3a1	99	79.848	Scophthalmus_maximus
ENSUAMG00000006750	SF3A1	99	82.890	ENSSDUG00000022219	sf3a1	99	82.494	Seriola_dumerili
ENSUAMG00000006750	SF3A1	99	82.890	ENSSLDG00000012642	sf3a1	99	82.494	Seriola_lalandi_dorsalis
ENSUAMG00000006750	SF3A1	96	94.909	ENSSARG00000005960	SF3A1	99	94.909	Sorex_araneus
ENSUAMG00000006750	SF3A1	95	90.992	ENSSPUG00000018863	SF3A1	99	90.602	Sphenodon_punctatus
ENSUAMG00000006750	SF3A1	99	83.523	ENSSPAG00000011856	sf3a1	99	83.016	Stegastes_partitus
ENSUAMG00000006750	SF3A1	99	98.348	ENSSSCG00000010002	SF3A1	99	98.348	Sus_scrofa
ENSUAMG00000006750	SF3A1	94	93.085	ENSTGUG00000010547	SF3A1	99	92.549	Taeniopygia_guttata
ENSUAMG00000006750	SF3A1	99	80.355	ENSTRUG00000006118	sf3a1	99	79.341	Takifugu_rubripes
ENSUAMG00000006750	SF3A1	63	81.413	ENSTNIG00000005713	sf3a1	91	83.271	Tetraodon_nigroviridis
ENSUAMG00000006750	SF3A1	99	90.724	ENSTBEG00000012771	SF3A1	99	90.724	Tupaia_belangeri
ENSUAMG00000006750	SF3A1	99	98.096	ENSTTRG00000001535	SF3A1	99	98.096	Tursiops_truncatus
ENSUAMG00000006750	SF3A1	98	97.941	ENSUMAG00000016665	SF3A1	98	97.941	Ursus_maritimus
ENSUAMG00000006750	SF3A1	99	98.729	ENSVVUG00000003075	SF3A1	99	98.729	Vulpes_vulpes
ENSUAMG00000006750	SF3A1	99	84.829	ENSXETG00000016144	sf3a1	99	84.324	Xenopus_tropicalis
ENSUAMG00000006750	SF3A1	98	82.202	ENSXCOG00000015653	sf3a1	99	81.369	Xiphophorus_couchianus
ENSUAMG00000006750	SF3A1	98	82.330	ENSXMAG00000002753	sf3a1	99	81.496	Xiphophorus_maculatus