EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000006943 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 5143 bases
Position: chrLZNR01004129.1:288966-294108
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000008124	LSM	PF01423.22	3.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000009172	-	291	-	ENSUAMP00000008124	96 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000006943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000006943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000006943	-	78	36.000	ENSUAMG00000004103	LSM1	56	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000006943	-	92	96.591	ENSG00000128534	LSM8	100	100.000	Homo_sapiens
ENSUAMG00000006943	-	92	92.045	ENSAPOG00000008649	lsm8	92	92.045	Acanthochromis_polyacanthus
ENSUAMG00000006943	-	92	96.591	ENSAMEG00000001162	LSM8	92	96.591	Ailuropoda_melanoleuca
ENSUAMG00000006943	-	78	97.333	ENSACIG00000014694	lsm8	100	97.333	Amphilophus_citrinellus
ENSUAMG00000006943	-	92	92.045	ENSAOCG00000013926	lsm8	92	92.045	Amphiprion_ocellaris
ENSUAMG00000006943	-	92	92.045	ENSAPEG00000023502	lsm8	92	92.045	Amphiprion_percula
ENSUAMG00000006943	-	78	97.333	ENSATEG00000023432	lsm8	100	97.333	Anabas_testudineus
ENSUAMG00000006943	-	95	94.505	ENSAPLG00000005115	LSM8	92	94.505	Anas_platyrhynchos
ENSUAMG00000006943	-	92	96.591	ENSANAG00000027771	LSM8	100	97.297	Aotus_nancymaae
ENSUAMG00000006943	-	92	92.045	ENSACLG00000011253	lsm8	92	92.045	Astatotilapia_calliptera
ENSUAMG00000006943	-	92	94.318	ENSAMXG00000042902	lsm8	92	94.318	Astyanax_mexicanus
ENSUAMG00000006943	-	92	96.591	ENSBTAG00000012649	LSM8	92	96.591	Bos_taurus
ENSUAMG00000006943	-	85	58.537	WBGene00003082	lsm-8	84	58.537	Caenorhabditis_elegans
ENSUAMG00000006943	-	92	96.591	ENSCJAG00000046406	LSM8	100	97.297	Callithrix_jacchus
ENSUAMG00000006943	-	91	96.552	ENSCAFG00000016459	LSM8	88	96.552	Canis_familiaris
ENSUAMG00000006943	-	92	96.591	ENSCAFG00020007643	-	92	96.591	Canis_lupus_dingo
ENSUAMG00000006943	-	92	84.091	ENSCAFG00020012800	-	69	84.091	Canis_lupus_dingo
ENSUAMG00000006943	-	98	97.872	ENSCHIG00000014201	LSM8	100	97.872	Capra_hircus
ENSUAMG00000006943	-	92	96.591	ENSTSYG00000032434	LSM8	92	96.591	Carlito_syrichta
ENSUAMG00000006943	-	77	98.649	ENSCAPG00000008253	LSM8	100	98.649	Cavia_aperea
ENSUAMG00000006943	-	92	96.591	ENSCPOG00000035673	LSM8	92	96.591	Cavia_porcellus
ENSUAMG00000006943	-	92	96.591	ENSCCAG00000021329	LSM8	100	97.297	Cebus_capucinus
ENSUAMG00000006943	-	92	96.591	ENSCATG00000045302	LSM8	100	97.297	Cercocebus_atys
ENSUAMG00000006943	-	92	96.591	ENSCLAG00000003726	LSM8	92	96.591	Chinchilla_lanigera
ENSUAMG00000006943	-	92	96.591	ENSCSAG00000010802	-	92	96.591	Chlorocebus_sabaeus
ENSUAMG00000006943	-	92	95.455	ENSCSAG00000019007	-	92	95.455	Chlorocebus_sabaeus
ENSUAMG00000006943	-	97	94.624	ENSCPBG00000008154	LSM8	95	94.624	Chrysemys_picta_bellii
ENSUAMG00000006943	-	92	75.000	ENSCING00000024877	-	92	75.000	Ciona_intestinalis
ENSUAMG00000006943	-	92	96.591	ENSCANG00000040728	LSM8	100	97.297	Colobus_angolensis_palliatus
ENSUAMG00000006943	-	92	96.591	ENSCGRG00001000450	Lsm8	92	96.591	Cricetulus_griseus_chok1gshd
ENSUAMG00000006943	-	89	100.000	ENSCGRG00000005587	Lsm8	100	100.000	Cricetulus_griseus_crigri
ENSUAMG00000006943	-	75	95.833	ENSCSEG00000004164	lsm8	79	95.833	Cynoglossus_semilaevis
ENSUAMG00000006943	-	92	90.909	ENSCVAG00000020547	lsm8	92	90.909	Cyprinodon_variegatus
ENSUAMG00000006943	-	89	95.294	ENSDARG00000091656	lsm8	89	95.294	Danio_rerio
ENSUAMG00000006943	-	92	96.591	ENSDNOG00000034613	LSM8	92	96.591	Dasypus_novemcinctus
ENSUAMG00000006943	-	92	96.591	ENSDORG00000027868	Lsm8	92	96.591	Dipodomys_ordii
ENSUAMG00000006943	-	92	67.045	FBgn0035271	CG2021	93	67.045	Drosophila_melanogaster
ENSUAMG00000006943	-	92	95.455	ENSETEG00000011594	LSM8	92	95.455	Echinops_telfairi
ENSUAMG00000006943	-	77	91.892	ENSEBUG00000012017	lsm8	100	91.892	Eptatretus_burgeri
ENSUAMG00000006943	-	89	100.000	ENSEASG00005008932	LSM8	55	100.000	Equus_asinus_asinus
ENSUAMG00000006943	-	100	96.875	ENSECAG00000024025	LSM8	87	96.875	Equus_caballus
ENSUAMG00000006943	-	92	90.909	ENSELUG00000010138	lsm8	92	90.909	Esox_lucius
ENSUAMG00000006943	-	83	70.000	ENSFCAG00000044794	-	81	70.000	Felis_catus
ENSUAMG00000006943	-	92	96.591	ENSFCAG00000036620	-	92	96.591	Felis_catus
ENSUAMG00000006943	-	92	95.455	ENSFALG00000010023	LSM8	92	95.455	Ficedula_albicollis
ENSUAMG00000006943	-	92	96.591	ENSFDAG00000019530	LSM8	92	96.591	Fukomys_damarensis
ENSUAMG00000006943	-	92	92.045	ENSFHEG00000013729	lsm8	92	92.045	Fundulus_heteroclitus
ENSUAMG00000006943	-	92	95.455	ENSGALG00000009110	LSM8	92	95.455	Gallus_gallus
ENSUAMG00000006943	-	92	90.909	ENSGAFG00000001135	lsm8	92	90.909	Gambusia_affinis
ENSUAMG00000006943	-	97	94.624	ENSGAGG00000017366	LSM8	95	94.624	Gopherus_agassizii
ENSUAMG00000006943	-	92	96.591	ENSGGOG00000041883	LSM8	92	96.591	Gorilla_gorilla
ENSUAMG00000006943	-	92	92.045	ENSHBUG00000003646	lsm8	92	92.045	Haplochromis_burtoni
ENSUAMG00000006943	-	63	95.000	ENSHGLG00000001988	-	87	95.000	Heterocephalus_glaber_female
ENSUAMG00000006943	-	92	90.909	ENSHGLG00000019782	-	92	90.909	Heterocephalus_glaber_female
ENSUAMG00000006943	-	91	93.103	ENSHGLG00100003934	-	87	93.103	Heterocephalus_glaber_male
ENSUAMG00000006943	-	92	92.045	ENSHGLG00100012166	-	92	92.045	Heterocephalus_glaber_male
ENSUAMG00000006943	-	92	90.909	ENSHCOG00000005037	lsm8	92	90.909	Hippocampus_comes
ENSUAMG00000006943	-	92	94.318	ENSIPUG00000019811	NAA38	92	94.318	Ictalurus_punctatus
ENSUAMG00000006943	-	92	96.591	ENSSTOG00000009039	LSM8	92	96.591	Ictidomys_tridecemlineatus
ENSUAMG00000006943	-	92	85.227	ENSSTOG00000034801	-	81	85.227	Ictidomys_tridecemlineatus
ENSUAMG00000006943	-	92	96.591	ENSJJAG00000009031	Lsm8	91	96.591	Jaculus_jaculus
ENSUAMG00000006943	-	92	92.045	ENSKMAG00000018983	lsm8	92	92.045	Kryptolebias_marmoratus
ENSUAMG00000006943	-	92	92.045	ENSLACG00000010231	LSM8	92	92.045	Latimeria_chalumnae
ENSUAMG00000006943	-	92	93.182	ENSLOCG00000015580	lsm8	92	93.182	Lepisosteus_oculatus
ENSUAMG00000006943	-	89	100.000	ENSLAFG00000011242	LSM8	88	100.000	Loxodonta_africana
ENSUAMG00000006943	-	92	96.591	ENSMFAG00000035798	LSM8	100	97.297	Macaca_fascicularis
ENSUAMG00000006943	-	92	94.318	ENSMFAG00000013044	-	92	94.318	Macaca_fascicularis
ENSUAMG00000006943	-	92	96.591	ENSMMUG00000046401	LSM8	100	97.297	Macaca_mulatta
ENSUAMG00000006943	-	78	96.000	ENSMNEG00000011141	-	100	96.000	Macaca_nemestrina
ENSUAMG00000006943	-	92	96.591	ENSMNEG00000036764	-	100	97.297	Macaca_nemestrina
ENSUAMG00000006943	-	92	81.818	ENSMLEG00000039324	-	91	81.818	Mandrillus_leucophaeus
ENSUAMG00000006943	-	92	96.591	ENSMLEG00000035828	-	100	97.297	Mandrillus_leucophaeus
ENSUAMG00000006943	-	78	97.333	ENSMAMG00000018839	lsm8	100	97.333	Mastacembelus_armatus
ENSUAMG00000006943	-	92	92.045	ENSMZEG00005019138	lsm8	92	92.045	Maylandia_zebra
ENSUAMG00000006943	-	92	95.455	ENSMGAG00000008808	LSM8	92	95.455	Meleagris_gallopavo
ENSUAMG00000006943	-	75	93.056	ENSMAUG00000020287	-	100	90.541	Mesocricetus_auratus
ENSUAMG00000006943	-	92	88.636	ENSMAUG00000015721	-	92	88.636	Mesocricetus_auratus
ENSUAMG00000006943	-	98	73.958	ENSMAUG00000015356	-	100	73.958	Mesocricetus_auratus
ENSUAMG00000006943	-	92	96.591	ENSMICG00000042730	LSM8	92	96.591	Microcebus_murinus
ENSUAMG00000006943	-	92	96.591	ENSMOCG00000001688	Lsm8	92	96.591	Microtus_ochrogaster
ENSUAMG00000006943	-	78	97.333	ENSMMOG00000006046	lsm8	100	97.333	Mola_mola
ENSUAMG00000006943	-	76	86.667	ENSMODG00000015729	LSM8	96	86.667	Monodelphis_domestica
ENSUAMG00000006943	-	92	93.182	ENSMALG00000000405	lsm8	92	93.182	Monopterus_albus
ENSUAMG00000006943	-	92	96.591	MGP_CAROLIEiJ_G0028125	-	92	96.591	Mus_caroli
ENSUAMG00000006943	-	92	96.591	ENSMUSG00000044155	Lsm8	92	96.591	Mus_musculus
ENSUAMG00000006943	-	92	96.591	MGP_PahariEiJ_G0021881	Lsm8	100	100.000	Mus_pahari
ENSUAMG00000006943	-	92	96.591	MGP_SPRETEiJ_G0029125	-	92	96.591	Mus_spretus
ENSUAMG00000006943	-	92	96.591	ENSMLUG00000006837	-	92	96.591	Myotis_lucifugus
ENSUAMG00000006943	-	92	95.455	ENSMLUG00000027762	-	92	95.455	Myotis_lucifugus
ENSUAMG00000006943	-	92	96.591	ENSNGAG00000016554	Lsm8	92	96.591	Nannospalax_galili
ENSUAMG00000006943	-	92	92.045	ENSNBRG00000014441	lsm8	92	92.045	Neolamprologus_brichardi
ENSUAMG00000006943	-	92	96.591	ENSNLEG00000011768	LSM8	92	96.591	Nomascus_leucogenys
ENSUAMG00000006943	-	92	84.091	ENSMEUG00000007801	LSM8	92	84.091	Notamacropus_eugenii
ENSUAMG00000006943	-	89	100.000	ENSOPRG00000014809	LSM8	100	100.000	Ochotona_princeps
ENSUAMG00000006943	-	88	76.744	ENSODEG00000020290	-	100	76.744	Octodon_degus
ENSUAMG00000006943	-	92	96.591	ENSODEG00000000418	-	92	96.591	Octodon_degus
ENSUAMG00000006943	-	92	96.591	ENSOANG00000014536	LSM8	92	96.591	Ornithorhynchus_anatinus
ENSUAMG00000006943	-	89	100.000	ENSOCUG00000017359	LSM8	88	100.000	Oryctolagus_cuniculus
ENSUAMG00000006943	-	75	97.222	ENSORLG00000017432	lsm8	77	97.222	Oryzias_latipes
ENSUAMG00000006943	-	75	97.222	ENSORLG00020004376	lsm8	77	97.222	Oryzias_latipes_hni
ENSUAMG00000006943	-	92	92.045	ENSORLG00015003757	lsm8	92	92.045	Oryzias_latipes_hsok
ENSUAMG00000006943	-	72	97.101	ENSOMEG00000022509	lsm8	83	93.333	Oryzias_melastigma
ENSUAMG00000006943	-	92	96.591	ENSOGAG00000013377	LSM8	92	96.591	Otolemur_garnettii
ENSUAMG00000006943	-	92	96.591	ENSOARG00000017974	LSM8	92	96.591	Ovis_aries
ENSUAMG00000006943	-	78	100.000	ENSPPAG00000043228	-	100	100.000	Pan_paniscus
ENSUAMG00000006943	-	92	96.591	ENSPPRG00000006444	LSM8	92	96.591	Panthera_pardus
ENSUAMG00000006943	-	92	96.591	ENSPTIG00000004722	LSM8	92	96.591	Panthera_tigris_altaica
ENSUAMG00000006943	-	78	100.000	ENSPTRG00000046596	-	100	100.000	Pan_troglodytes
ENSUAMG00000006943	-	92	96.591	ENSPANG00000035470	-	100	97.297	Papio_anubis
ENSUAMG00000006943	-	92	93.182	ENSPANG00000019395	-	92	93.182	Papio_anubis
ENSUAMG00000006943	-	100	89.583	ENSPKIG00000006092	lsm8	97	89.583	Paramormyrops_kingsleyae
ENSUAMG00000006943	-	78	100.000	ENSPSIG00000017054	LSM8	100	100.000	Pelodiscus_sinensis
ENSUAMG00000006943	-	78	97.333	ENSPMGG00000016442	lsm8	100	97.333	Periophthalmus_magnuspinnatus
ENSUAMG00000006943	-	77	97.297	ENSPEMG00000009153	Lsm8	100	97.297	Peromyscus_maniculatus_bairdii
ENSUAMG00000006943	-	89	96.471	ENSPCIG00000021467	LSM8	89	96.471	Phascolarctos_cinereus
ENSUAMG00000006943	-	92	90.909	ENSPFOG00000012340	lsm8	92	90.909	Poecilia_formosa
ENSUAMG00000006943	-	91	94.253	ENSPLAG00000000516	lsm8	91	94.253	Poecilia_latipinna
ENSUAMG00000006943	-	92	90.909	ENSPMEG00000022567	lsm8	92	90.909	Poecilia_mexicana
ENSUAMG00000006943	-	76	85.000	ENSPREG00000005527	lsm8	72	85.000	Poecilia_reticulata
ENSUAMG00000006943	-	92	96.591	ENSPPYG00000017942	LSM8	92	96.591	Pongo_abelii
ENSUAMG00000006943	-	88	77.381	ENSPCOG00000017982	-	86	77.381	Propithecus_coquereli
ENSUAMG00000006943	-	92	96.591	ENSPCOG00000003309	-	92	96.591	Propithecus_coquereli
ENSUAMG00000006943	-	89	98.824	ENSPVAG00000000990	LSM8	100	98.824	Pteropus_vampyrus
ENSUAMG00000006943	-	92	92.045	ENSPNYG00000011448	lsm8	92	92.045	Pundamilia_nyererei
ENSUAMG00000006943	-	92	94.318	ENSPNAG00000010252	lsm8	92	94.318	Pygocentrus_nattereri
ENSUAMG00000006943	-	92	96.591	ENSRNOG00000058677	Lsm8	92	96.591	Rattus_norvegicus
ENSUAMG00000006943	-	92	96.591	ENSRBIG00000032851	LSM8	100	97.297	Rhinopithecus_bieti
ENSUAMG00000006943	-	92	96.591	ENSRROG00000039618	LSM8	100	97.297	Rhinopithecus_roxellana
ENSUAMG00000006943	-	92	96.591	ENSSBOG00000023223	LSM8	100	97.297	Saimiri_boliviensis_boliviensis
ENSUAMG00000006943	-	92	96.591	ENSSHAG00000018435	-	92	96.591	Sarcophilus_harrisii
ENSUAMG00000006943	-	92	90.909	ENSSFOG00015004412	lsm8	92	90.909	Scleropages_formosus
ENSUAMG00000006943	-	78	97.333	ENSSMAG00000009458	lsm8	100	97.333	Scophthalmus_maximus
ENSUAMG00000006943	-	92	92.045	ENSSDUG00000014702	lsm8	92	92.045	Seriola_dumerili
ENSUAMG00000006943	-	78	97.333	ENSSLDG00000016870	lsm8	100	97.333	Seriola_lalandi_dorsalis
ENSUAMG00000006943	-	75	100.000	ENSSARG00000009628	-	100	100.000	Sorex_araneus
ENSUAMG00000006943	-	92	96.591	ENSSPUG00000017419	LSM8	92	96.591	Sphenodon_punctatus
ENSUAMG00000006943	-	92	92.045	ENSSPAG00000021422	lsm8	92	92.045	Stegastes_partitus
ENSUAMG00000006943	-	92	96.591	ENSSSCG00000021652	LSM8	92	96.591	Sus_scrofa
ENSUAMG00000006943	-	92	95.455	ENSTGUG00000004730	-	92	95.455	Taeniopygia_guttata
ENSUAMG00000006943	-	92	94.318	ENSTGUG00000016823	-	92	94.318	Taeniopygia_guttata
ENSUAMG00000006943	-	92	92.045	ENSTRUG00000025192	lsm8	92	92.045	Takifugu_rubripes
ENSUAMG00000006943	-	92	92.045	ENSTNIG00000002864	lsm8	92	92.045	Tetraodon_nigroviridis
ENSUAMG00000006943	-	92	96.591	ENSTTRG00000001023	LSM8	92	96.591	Tursiops_truncatus
ENSUAMG00000006943	-	98	100.000	ENSUMAG00000003073	LSM8	100	100.000	Ursus_maritimus
ENSUAMG00000006943	-	92	96.591	ENSVPAG00000001530	LSM8	92	96.591	Vicugna_pacos
ENSUAMG00000006943	-	78	97.333	ENSVVUG00000013248	-	82	97.333	Vulpes_vulpes
ENSUAMG00000006943	-	89	97.647	ENSXETG00000021829	lsm8	88	97.647	Xenopus_tropicalis
ENSUAMG00000006943	-	89	92.941	ENSXCOG00000012938	lsm8	89	92.941	Xiphophorus_couchianus
ENSUAMG00000006943	-	92	90.909	ENSXMAG00000025919	lsm8	92	90.909	Xiphophorus_maculatus