EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000006949 (Gene tree)
Gene ID: -
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 30648 bases
Position: chrLZNR01004130.1:151941-182588
Accession: 21863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000008413	RRM_1	PF00076.22	9.1e-57	1	3
ENSUAMP00000008413	RRM_1	PF00076.22	9.1e-57	2	3
ENSUAMP00000008413	RRM_1	PF00076.22	9.1e-57	3	3
ENSUAMP00000008424	RRM_1	PF00076.22	3.6e-55	1	3
ENSUAMP00000008424	RRM_1	PF00076.22	3.6e-55	2	3
ENSUAMP00000008424	RRM_1	PF00076.22	3.6e-55	3	3
ENSUAMP00000008406	RRM_1	PF00076.22	8.8e-55	1	3
ENSUAMP00000008406	RRM_1	PF00076.22	8.8e-55	2	3
ENSUAMP00000008406	RRM_1	PF00076.22	8.8e-55	3	3
ENSUAMP00000008421	RRM_1	PF00076.22	1.3e-54	1	3
ENSUAMP00000008421	RRM_1	PF00076.22	1.3e-54	2	3
ENSUAMP00000008421	RRM_1	PF00076.22	1.3e-54	3	3
ENSUAMP00000008418	RRM_1	PF00076.22	1.7e-54	1	3
ENSUAMP00000008418	RRM_1	PF00076.22	1.7e-54	2	3
ENSUAMP00000008418	RRM_1	PF00076.22	1.7e-54	3	3
ENSUAMP00000008423	RRM_1	PF00076.22	1.1e-44	1	3
ENSUAMP00000008423	RRM_1	PF00076.22	1.1e-44	2	3
ENSUAMP00000008423	RRM_1	PF00076.22	1.1e-44	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000009495	RBM28-204	2196	-	ENSUAMP00000008421	731 (aa)	-	-
ENSUAMT00000009497	RBM28-205	2184	-	ENSUAMP00000008423	727 (aa)	-	-
ENSUAMT00000009480	RBM28-201	2268	-	ENSUAMP00000008406	755 (aa)	-	-
ENSUAMT00000009492	RBM28-203	2214	-	ENSUAMP00000008418	737 (aa)	-	-
ENSUAMT00000009498	RBM28-206	2067	-	ENSUAMP00000008424	688 (aa)	-	-
ENSUAMT00000009488	RBM28-202	2256	-	ENSUAMP00000008413	751 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000006949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000006949's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000006949	RBM28	100	77.880	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSUAMG00000006949	RBM28	87	55.932	ENSAPOG00000015512	rbm28	100	48.035	Acanthochromis_polyacanthus
ENSUAMG00000006949	RBM28	100	96.739	ENSAMEG00000004776	RBM28	90	96.739	Ailuropoda_melanoleuca
ENSUAMG00000006949	RBM28	57	50.000	ENSACIG00000023153	rbm28	100	46.639	Amphilophus_citrinellus
ENSUAMG00000006949	RBM28	83	60.190	ENSAOCG00000000462	rbm28	100	49.418	Amphiprion_ocellaris
ENSUAMG00000006949	RBM28	88	56.017	ENSAPEG00000012996	rbm28	100	49.288	Amphiprion_percula
ENSUAMG00000006949	RBM28	84	60.396	ENSATEG00000001672	rbm28	100	43.612	Anabas_testudineus
ENSUAMG00000006949	RBM28	100	77.778	ENSANAG00000033922	RBM28	100	76.984	Aotus_nancymaae
ENSUAMG00000006949	RBM28	100	47.296	ENSACLG00000025024	rbm28	100	48.119	Astatotilapia_calliptera
ENSUAMG00000006949	RBM28	60	52.822	ENSAMXG00000000763	rbm28	99	54.091	Astyanax_mexicanus
ENSUAMG00000006949	RBM28	85	100.000	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSUAMG00000006949	RBM28	100	75.722	ENSCJAG00000017731	RBM28	100	75.591	Callithrix_jacchus
ENSUAMG00000006949	RBM28	100	84.321	ENSCAFG00000001667	RBM28	100	84.585	Canis_familiaris
ENSUAMG00000006949	RBM28	100	84.321	ENSCAFG00020021648	RBM28	100	84.585	Canis_lupus_dingo
ENSUAMG00000006949	RBM28	100	79.315	ENSCHIG00000014146	RBM28	100	78.656	Capra_hircus
ENSUAMG00000006949	RBM28	100	76.793	ENSTSYG00000002892	RBM28	100	76.923	Carlito_syrichta
ENSUAMG00000006949	RBM28	81	56.514	ENSCAPG00000013218	RBM28	99	56.684	Cavia_aperea
ENSUAMG00000006949	RBM28	100	75.821	ENSCPOG00000006253	RBM28	100	75.690	Cavia_porcellus
ENSUAMG00000006949	RBM28	100	76.548	ENSCCAG00000035105	RBM28	100	76.548	Cebus_capucinus
ENSUAMG00000006949	RBM28	100	77.516	ENSCATG00000040497	RBM28	100	77.386	Cercocebus_atys
ENSUAMG00000006949	RBM28	100	73.605	ENSCLAG00000003707	RBM28	100	73.333	Chinchilla_lanigera
ENSUAMG00000006949	RBM28	100	77.953	ENSCSAG00000010161	RBM28	100	77.602	Chlorocebus_sabaeus
ENSUAMG00000006949	RBM28	58	87.097	ENSCHOG00000001994	-	63	88.710	Choloepus_hoffmanni
ENSUAMG00000006949	RBM28	51	54.378	ENSCPBG00000018088	RBM28	87	53.731	Chrysemys_picta_bellii
ENSUAMG00000006949	RBM28	80	66.279	ENSCING00000009238	-	84	39.080	Ciona_intestinalis
ENSUAMG00000006949	RBM28	100	70.804	ENSCANG00000038397	RBM28	100	80.368	Colobus_angolensis_palliatus
ENSUAMG00000006949	RBM28	100	69.847	ENSCGRG00001021278	Rbm28	100	72.152	Cricetulus_griseus_chok1gshd
ENSUAMG00000006949	RBM28	100	74.578	ENSCGRG00000005098	Rbm28	100	74.189	Cricetulus_griseus_crigri
ENSUAMG00000006949	RBM28	100	47.172	ENSCSEG00000004212	rbm28	100	46.633	Cynoglossus_semilaevis
ENSUAMG00000006949	RBM28	84	59.024	ENSCVAG00000010493	rbm28	99	47.402	Cyprinodon_variegatus
ENSUAMG00000006949	RBM28	90	50.776	ENSDARG00000025332	rbm28	100	50.000	Danio_rerio
ENSUAMG00000006949	RBM28	100	78.318	ENSDNOG00000001124	RBM28	100	78.187	Dasypus_novemcinctus
ENSUAMG00000006949	RBM28	67	73.146	ENSDORG00000004184	Rbm28	98	73.214	Dipodomys_ordii
ENSUAMG00000006949	RBM28	69	36.106	FBgn0260456	CG4806	70	36.117	Drosophila_melanogaster
ENSUAMG00000006949	RBM28	100	68.816	ENSETEG00000007130	RBM28	99	69.051	Echinops_telfairi
ENSUAMG00000006949	RBM28	99	38.146	ENSEBUG00000004419	rbm28	98	39.418	Eptatretus_burgeri
ENSUAMG00000006949	RBM28	100	81.299	ENSEASG00005008528	RBM28	100	80.649	Equus_asinus_asinus
ENSUAMG00000006949	RBM28	100	80.674	ENSECAG00000007745	RBM28	100	80.415	Equus_caballus
ENSUAMG00000006949	RBM28	100	69.713	ENSEEUG00000002389	RBM28	100	74.632	Erinaceus_europaeus
ENSUAMG00000006949	RBM28	100	46.280	ENSELUG00000020602	rbm28	100	49.874	Esox_lucius
ENSUAMG00000006949	RBM28	85	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSUAMG00000006949	RBM28	100	76.680	ENSFDAG00000010169	RBM28	100	75.885	Fukomys_damarensis
ENSUAMG00000006949	RBM28	83	55.897	ENSGMOG00000007091	rbm28	99	44.415	Gadus_morhua
ENSUAMG00000006949	RBM28	60	50.889	ENSGAFG00000004802	rbm28	98	51.316	Gambusia_affinis
ENSUAMG00000006949	RBM28	82	60.204	ENSGACG00000012612	rbm28	100	48.298	Gasterosteus_aculeatus
ENSUAMG00000006949	RBM28	82	70.352	ENSGAGG00000008873	RBM28	93	64.324	Gopherus_agassizii
ENSUAMG00000006949	RBM28	95	76.519	ENSGGOG00000004644	RBM28	97	76.657	Gorilla_gorilla
ENSUAMG00000006949	RBM28	91	47.966	ENSHBUG00000009611	rbm28	94	49.062	Haplochromis_burtoni
ENSUAMG00000006949	RBM28	100	75.989	ENSHGLG00000005409	RBM28	100	75.858	Heterocephalus_glaber_female
ENSUAMG00000006949	RBM28	100	75.894	ENSHGLG00100016458	RBM28	100	75.099	Heterocephalus_glaber_male
ENSUAMG00000006949	RBM28	99	38.810	ENSHCOG00000010597	rbm28	99	42.601	Hippocampus_comes
ENSUAMG00000006949	RBM28	57	43.059	ENSIPUG00000007103	rbm28	92	42.308	Ictalurus_punctatus
ENSUAMG00000006949	RBM28	100	76.073	ENSSTOG00000002169	RBM28	100	75.553	Ictidomys_tridecemlineatus
ENSUAMG00000006949	RBM28	100	70.635	ENSJJAG00000022400	Rbm28	100	70.503	Jaculus_jaculus
ENSUAMG00000006949	RBM28	99	45.855	ENSKMAG00000013348	rbm28	99	47.876	Kryptolebias_marmoratus
ENSUAMG00000006949	RBM28	83	56.190	ENSLBEG00000012998	rbm28	100	46.962	Labrus_bergylta
ENSUAMG00000006949	RBM28	71	69.388	ENSLACG00000010485	-	90	69.388	Latimeria_chalumnae
ENSUAMG00000006949	RBM28	100	63.402	ENSLOCG00000015541	rbm28	82	63.918	Lepisosteus_oculatus
ENSUAMG00000006949	RBM28	100	77.734	ENSLAFG00000010717	RBM28	100	77.470	Loxodonta_africana
ENSUAMG00000006949	RBM28	100	77.647	ENSMFAG00000031036	RBM28	100	77.386	Macaca_fascicularis
ENSUAMG00000006949	RBM28	100	77.546	ENSMMUG00000007250	RBM28	100	77.415	Macaca_mulatta
ENSUAMG00000006949	RBM28	100	77.575	ENSMNEG00000036970	RBM28	100	77.532	Macaca_nemestrina
ENSUAMG00000006949	RBM28	90	79.042	ENSMLEG00000037717	RBM28	100	79.042	Mandrillus_leucophaeus
ENSUAMG00000006949	RBM28	100	47.257	ENSMAMG00000008525	rbm28	100	48.124	Mastacembelus_armatus
ENSUAMG00000006949	RBM28	93	46.568	ENSMZEG00005019625	rbm28	100	47.075	Maylandia_zebra
ENSUAMG00000006949	RBM28	100	72.265	ENSMAUG00000002263	Rbm28	100	71.883	Mesocricetus_auratus
ENSUAMG00000006949	RBM28	93	73.793	ENSMICG00000000107	RBM28	100	79.008	Microcebus_murinus
ENSUAMG00000006949	RBM28	100	73.499	ENSMOCG00000014615	Rbm28	100	73.107	Microtus_ochrogaster
ENSUAMG00000006949	RBM28	60	48.174	ENSMMOG00000008600	rbm28	99	45.918	Mola_mola
ENSUAMG00000006949	RBM28	100	67.405	ENSMODG00000015151	RBM28	100	68.312	Monodelphis_domestica
ENSUAMG00000006949	RBM28	93	48.889	ENSMALG00000006419	rbm28	100	46.332	Monopterus_albus
ENSUAMG00000006949	RBM28	100	74.079	MGP_CAROLIEiJ_G0028162	Rbm28	100	74.079	Mus_caroli
ENSUAMG00000006949	RBM28	100	74.474	ENSMUSG00000029701	Rbm28	100	74.079	Mus_musculus
ENSUAMG00000006949	RBM28	100	74.113	MGP_PahariEiJ_G0021920	Rbm28	100	73.553	Mus_pahari
ENSUAMG00000006949	RBM28	100	74.605	MGP_SPRETEiJ_G0029162	Rbm28	100	74.211	Mus_spretus
ENSUAMG00000006949	RBM28	100	84.757	ENSMPUG00000006511	RBM28	100	85.283	Mustela_putorius_furo
ENSUAMG00000006949	RBM28	100	78.431	ENSMLUG00000002186	RBM28	100	78.301	Myotis_lucifugus
ENSUAMG00000006949	RBM28	100	70.565	ENSNGAG00000017946	-	100	70.171	Nannospalax_galili
ENSUAMG00000006949	RBM28	100	73.254	ENSNGAG00000006480	-	100	72.596	Nannospalax_galili
ENSUAMG00000006949	RBM28	85	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSUAMG00000006949	RBM28	81	80.864	ENSMEUG00000009611	RBM28	90	82.099	Notamacropus_eugenii
ENSUAMG00000006949	RBM28	92	66.871	ENSOPRG00000015140	RBM28	90	67.304	Ochotona_princeps
ENSUAMG00000006949	RBM28	80	73.041	ENSODEG00000013217	-	87	74.126	Octodon_degus
ENSUAMG00000006949	RBM28	100	71.805	ENSODEG00000003213	-	100	71.673	Octodon_degus
ENSUAMG00000006949	RBM28	83	57.075	ENSONIG00000014924	rbm28	100	48.067	Oreochromis_niloticus
ENSUAMG00000006949	RBM28	86	81.951	ENSOANG00000000815	-	100	58.877	Ornithorhynchus_anatinus
ENSUAMG00000006949	RBM28	100	74.319	ENSOCUG00000003009	RBM28	100	74.189	Oryctolagus_cuniculus
ENSUAMG00000006949	RBM28	99	45.949	ENSORLG00000009636	rbm28	99	49.482	Oryzias_latipes
ENSUAMG00000006949	RBM28	89	54.661	ENSORLG00020002123	rbm28	99	50.260	Oryzias_latipes_hni
ENSUAMG00000006949	RBM28	99	59.709	ENSORLG00015015030	rbm28	98	60.194	Oryzias_latipes_hsok
ENSUAMG00000006949	RBM28	88	55.508	ENSOMEG00000007801	rbm28	100	50.712	Oryzias_melastigma
ENSUAMG00000006949	RBM28	95	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSUAMG00000006949	RBM28	100	78.740	ENSOARG00000002547	RBM28	100	78.346	Ovis_aries
ENSUAMG00000006949	RBM28	100	77.415	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSUAMG00000006949	RBM28	85	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSUAMG00000006949	RBM28	85	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSUAMG00000006949	RBM28	100	77.546	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSUAMG00000006949	RBM28	100	77.546	ENSPANG00000022295	RBM28	100	77.546	Papio_anubis
ENSUAMG00000006949	RBM28	99	48.391	ENSPKIG00000023453	rbm28	99	47.750	Paramormyrops_kingsleyae
ENSUAMG00000006949	RBM28	89	52.263	ENSPMGG00000012840	rbm28	100	42.649	Periophthalmus_magnuspinnatus
ENSUAMG00000006949	RBM28	100	71.111	ENSPEMG00000020673	Rbm28	100	70.719	Peromyscus_maniculatus_bairdii
ENSUAMG00000006949	RBM28	100	66.142	ENSPCIG00000012810	RBM28	100	67.578	Phascolarctos_cinereus
ENSUAMG00000006949	RBM28	60	51.556	ENSPFOG00000018209	rbm28	100	46.572	Poecilia_formosa
ENSUAMG00000006949	RBM28	59	50.223	ENSPLAG00000016078	rbm28	96	46.701	Poecilia_latipinna
ENSUAMG00000006949	RBM28	60	51.441	ENSPMEG00000004292	rbm28	100	47.503	Poecilia_mexicana
ENSUAMG00000006949	RBM28	58	50.457	ENSPREG00000014287	rbm28	98	45.372	Poecilia_reticulata
ENSUAMG00000006949	RBM28	100	77.953	ENSPPYG00000017975	RBM28	100	77.734	Pongo_abelii
ENSUAMG00000006949	RBM28	74	71.921	ENSPCAG00000008223	RBM28	83	71.921	Procavia_capensis
ENSUAMG00000006949	RBM28	80	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSUAMG00000006949	RBM28	77	92.537	ENSPVAG00000005443	RBM28	77	91.667	Pteropus_vampyrus
ENSUAMG00000006949	RBM28	100	47.170	ENSPNYG00000014003	rbm28	100	48.124	Pundamilia_nyererei
ENSUAMG00000006949	RBM28	100	72.895	ENSRNOG00000005468	Rbm28	100	72.500	Rattus_norvegicus
ENSUAMG00000006949	RBM28	85	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSUAMG00000006949	RBM28	85	100.000	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSUAMG00000006949	RBM28	100	72.714	ENSSBOG00000012308	RBM28	100	72.571	Saimiri_boliviensis_boliviensis
ENSUAMG00000006949	RBM28	96	63.870	ENSSHAG00000017017	RBM28	99	63.469	Sarcophilus_harrisii
ENSUAMG00000006949	RBM28	84	63.810	ENSSFOG00015001231	rbm28	100	48.837	Scleropages_formosus
ENSUAMG00000006949	RBM28	61	49.778	ENSSMAG00000003885	rbm28	99	46.774	Scophthalmus_maximus
ENSUAMG00000006949	RBM28	69	45.574	ENSSDUG00000014270	rbm28	99	48.932	Seriola_dumerili
ENSUAMG00000006949	RBM28	88	54.978	ENSSLDG00000020099	rbm28	100	46.954	Seriola_lalandi_dorsalis
ENSUAMG00000006949	RBM28	74	85.556	ENSSARG00000008303	RBM28	81	82.778	Sorex_araneus
ENSUAMG00000006949	RBM28	66	73.529	ENSSPUG00000000838	RBM28	80	73.529	Sphenodon_punctatus
ENSUAMG00000006949	RBM28	80	52.717	ENSSPAG00000023305	rbm28	100	46.757	Stegastes_partitus
ENSUAMG00000006949	RBM28	100	81.060	ENSSSCG00000031847	RBM28	100	80.795	Sus_scrofa
ENSUAMG00000006949	RBM28	93	51.538	ENSTRUG00000013311	rbm28	99	45.409	Takifugu_rubripes
ENSUAMG00000006949	RBM28	99	48.708	ENSTNIG00000017962	rbm28	99	48.196	Tetraodon_nigroviridis
ENSUAMG00000006949	RBM28	86	75.148	ENSTBEG00000012749	RBM28	86	75.148	Tupaia_belangeri
ENSUAMG00000006949	RBM28	100	77.255	ENSTTRG00000013647	RBM28	100	76.184	Tursiops_truncatus
ENSUAMG00000006949	RBM28	100	91.173	ENSUMAG00000005997	RBM28	100	91.700	Ursus_maritimus
ENSUAMG00000006949	RBM28	85	79.128	ENSVPAG00000008304	RBM28	86	78.858	Vicugna_pacos
ENSUAMG00000006949	RBM28	100	83.926	ENSVVUG00000007270	RBM28	100	84.190	Vulpes_vulpes
ENSUAMG00000006949	RBM28	91	65.094	ENSXETG00000009271	rbm28	99	52.057	Xenopus_tropicalis
ENSUAMG00000006949	RBM28	60	49.318	ENSXCOG00000020357	rbm28	99	47.531	Xiphophorus_couchianus
ENSUAMG00000006949	RBM28	60	49.552	ENSXMAG00000004415	rbm28	100	46.503	Xiphophorus_maculatus