EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000007174 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 149513 bases
Position: chrLZNR01000005.1:284200-433712
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000008569	Ago_hook	PF10427.9	1.3e-19	1	1
ENSUAMP00000008566	Ago_hook	PF10427.9	1.7e-19	1	1
ENSUAMP00000008568	Ago_hook	PF10427.9	1.8e-19	1	1
ENSUAMP00000008571	Ago_hook	PF10427.9	8.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000009667	TNRC6B-204	5181	-	ENSUAMP00000008571	1726 (aa)	-	-
ENSUAMT00000009661	TNRC6B-202	5394	-	ENSUAMP00000008568	1797 (aa)	-	-
ENSUAMT00000009665	TNRC6B-203	5340	-	ENSUAMP00000008569	1779 (aa)	-	-
ENSUAMT00000009658	TNRC6B-201	5409	-	ENSUAMP00000008566	1802 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000007174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000007174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000007174	TNRC6B	78	35.137	ENSUAMG00000006656	-	93	35.572

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000007174	TNRC6B	98	97.272	ENSG00000100354	TNRC6B	99	97.412	Homo_sapiens
ENSUAMG00000007174	TNRC6B	99	93.344	ENSAMEG00000011025	TNRC6B	100	92.188	Ailuropoda_melanoleuca
ENSUAMG00000007174	TNRC6B	98	88.527	ENSAPLG00000009347	TNRC6B	99	88.527	Anas_platyrhynchos
ENSUAMG00000007174	TNRC6B	99	73.179	ENSACAG00000007281	TNRC6B	99	72.743	Anolis_carolinensis
ENSUAMG00000007174	TNRC6B	98	97.272	ENSANAG00000035042	TNRC6B	99	96.158	Aotus_nancymaae
ENSUAMG00000007174	TNRC6B	83	48.069	ENSAMXG00000008707	tnrc6b	85	47.059	Astyanax_mexicanus
ENSUAMG00000007174	TNRC6B	99	95.434	ENSBTAG00000021076	TNRC6B	99	95.434	Bos_taurus
ENSUAMG00000007174	TNRC6B	98	96.625	ENSCJAG00000002732	TNRC6B	99	99.155	Callithrix_jacchus
ENSUAMG00000007174	TNRC6B	99	98.024	ENSCAFG00000001255	TNRC6B	99	98.024	Canis_familiaris
ENSUAMG00000007174	TNRC6B	99	98.381	ENSCAFG00020002189	TNRC6B	100	98.220	Canis_lupus_dingo
ENSUAMG00000007174	TNRC6B	99	95.980	ENSCHIG00000003491	TNRC6B	100	95.373	Capra_hircus
ENSUAMG00000007174	TNRC6B	98	97.034	ENSTSYG00000011836	TNRC6B	100	95.647	Carlito_syrichta
ENSUAMG00000007174	TNRC6B	99	94.581	ENSCPOG00000005705	TNRC6B	100	94.030	Cavia_porcellus
ENSUAMG00000007174	TNRC6B	99	95.571	ENSCCAG00000019912	TNRC6B	99	95.571	Cebus_capucinus
ENSUAMG00000007174	TNRC6B	98	96.739	ENSCATG00000029291	TNRC6B	99	96.739	Cercocebus_atys
ENSUAMG00000007174	TNRC6B	99	95.302	ENSCLAG00000016942	TNRC6B	100	94.798	Chinchilla_lanigera
ENSUAMG00000007174	TNRC6B	98	92.989	ENSCSAG00000006021	TNRC6B	99	91.817	Chlorocebus_sabaeus
ENSUAMG00000007174	TNRC6B	91	86.675	ENSCPBG00000022932	TNRC6B	99	85.655	Chrysemys_picta_bellii
ENSUAMG00000007174	TNRC6B	98	96.667	ENSCANG00000030776	TNRC6B	99	96.667	Colobus_angolensis_palliatus
ENSUAMG00000007174	TNRC6B	96	93.356	ENSCGRG00001020166	Tnrc6b	99	93.764	Cricetulus_griseus_chok1gshd
ENSUAMG00000007174	TNRC6B	100	93.436	ENSCGRG00000016696	Tnrc6b	99	93.771	Cricetulus_griseus_crigri
ENSUAMG00000007174	TNRC6B	99	95.319	ENSDNOG00000012744	TNRC6B	100	94.646	Dasypus_novemcinctus
ENSUAMG00000007174	TNRC6B	98	96.492	ENSDORG00000003386	Tnrc6b	100	94.914	Dipodomys_ordii
ENSUAMG00000007174	TNRC6B	98	88.085	ENSETEG00000006570	TNRC6B	99	87.326	Echinops_telfairi
ENSUAMG00000007174	TNRC6B	100	97.336	ENSEASG00005005306	TNRC6B	100	97.336	Equus_asinus_asinus
ENSUAMG00000007174	TNRC6B	100	96.694	ENSECAG00000009759	TNRC6B	99	99.000	Equus_caballus
ENSUAMG00000007174	TNRC6B	60	97.070	ENSEEUG00000008690	-	62	97.070	Erinaceus_europaeus
ENSUAMG00000007174	TNRC6B	100	96.701	ENSFCAG00000004791	TNRC6B	100	96.701	Felis_catus
ENSUAMG00000007174	TNRC6B	95	89.098	ENSFALG00000012195	TNRC6B	100	88.863	Ficedula_albicollis
ENSUAMG00000007174	TNRC6B	99	95.140	ENSFDAG00000021368	TNRC6B	100	94.638	Fukomys_damarensis
ENSUAMG00000007174	TNRC6B	98	89.679	ENSGALG00000012050	TNRC6B	98	87.850	Gallus_gallus
ENSUAMG00000007174	TNRC6B	98	88.851	ENSGAGG00000025188	TNRC6B	99	86.935	Gopherus_agassizii
ENSUAMG00000007174	TNRC6B	99	96.864	ENSGGOG00000008444	TNRC6B	99	96.864	Gorilla_gorilla
ENSUAMG00000007174	TNRC6B	99	95.409	ENSHGLG00000009306	TNRC6B	100	94.848	Heterocephalus_glaber_female
ENSUAMG00000007174	TNRC6B	99	95.460	ENSHGLG00100018108	TNRC6B	100	95.572	Heterocephalus_glaber_male
ENSUAMG00000007174	TNRC6B	79	46.789	ENSIPUG00000001515	tnrc6b	94	44.733	Ictalurus_punctatus
ENSUAMG00000007174	TNRC6B	98	96.780	ENSSTOG00000008927	TNRC6B	100	95.246	Ictidomys_tridecemlineatus
ENSUAMG00000007174	TNRC6B	98	95.118	ENSJJAG00000015779	Tnrc6b	100	93.650	Jaculus_jaculus
ENSUAMG00000007174	TNRC6B	98	61.461	ENSLACG00000000628	-	99	61.315	Latimeria_chalumnae
ENSUAMG00000007174	TNRC6B	77	96.444	ENSLAFG00000014473	TNRC6B	100	95.449	Loxodonta_africana
ENSUAMG00000007174	TNRC6B	98	96.745	ENSMFAG00000003862	TNRC6B	99	96.745	Macaca_fascicularis
ENSUAMG00000007174	TNRC6B	99	95.695	ENSMMUG00000021345	TNRC6B	99	95.941	Macaca_mulatta
ENSUAMG00000007174	TNRC6B	99	96.253	ENSMNEG00000042745	TNRC6B	99	96.730	Macaca_nemestrina
ENSUAMG00000007174	TNRC6B	98	96.745	ENSMLEG00000041780	TNRC6B	99	96.745	Mandrillus_leucophaeus
ENSUAMG00000007174	TNRC6B	98	84.193	ENSMGAG00000012333	TNRC6B	99	82.670	Meleagris_gallopavo
ENSUAMG00000007174	TNRC6B	98	94.722	ENSMAUG00000016123	Tnrc6b	100	92.384	Mesocricetus_auratus
ENSUAMG00000007174	TNRC6B	99	96.311	ENSMICG00000014056	TNRC6B	99	96.846	Microcebus_murinus
ENSUAMG00000007174	TNRC6B	99	89.705	ENSMOCG00000020334	Tnrc6b	98	94.500	Microtus_ochrogaster
ENSUAMG00000007174	TNRC6B	99	93.478	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	92.995	Mus_caroli
ENSUAMG00000007174	TNRC6B	99	93.423	ENSMUSG00000047888	Tnrc6b	99	94.398	Mus_musculus
ENSUAMG00000007174	TNRC6B	98	94.087	MGP_PahariEiJ_G0020045	Tnrc6b	100	92.605	Mus_pahari
ENSUAMG00000007174	TNRC6B	99	93.645	MGP_SPRETEiJ_G0020941	Tnrc6b	100	93.161	Mus_spretus
ENSUAMG00000007174	TNRC6B	96	98.855	ENSMPUG00000016442	TNRC6B	99	89.277	Mustela_putorius_furo
ENSUAMG00000007174	TNRC6B	98	91.871	ENSMLUG00000008765	TNRC6B	99	89.978	Myotis_lucifugus
ENSUAMG00000007174	TNRC6B	98	95.014	ENSNGAG00000021294	Tnrc6b	100	93.278	Nannospalax_galili
ENSUAMG00000007174	TNRC6B	87	95.701	ENSNLEG00000015311	TNRC6B	100	95.159	Nomascus_leucogenys
ENSUAMG00000007174	TNRC6B	88	94.091	ENSOPRG00000012054	TNRC6B	88	94.318	Ochotona_princeps
ENSUAMG00000007174	TNRC6B	99	94.986	ENSODEG00000013146	TNRC6B	100	94.542	Octodon_degus
ENSUAMG00000007174	TNRC6B	51	47.278	ENSONIG00000019679	-	99	41.544	Oreochromis_niloticus
ENSUAMG00000007174	TNRC6B	98	95.917	ENSOCUG00000016128	TNRC6B	99	94.605	Oryctolagus_cuniculus
ENSUAMG00000007174	TNRC6B	99	91.043	ENSOGAG00000011096	TNRC6B	99	89.777	Otolemur_garnettii
ENSUAMG00000007174	TNRC6B	99	95.014	ENSOARG00000017238	TNRC6B	100	94.408	Ovis_aries
ENSUAMG00000007174	TNRC6B	99	96.374	ENSPPAG00000028514	TNRC6B	99	96.374	Pan_paniscus
ENSUAMG00000007174	TNRC6B	99	97.672	ENSPPRG00000017741	TNRC6B	99	97.672	Panthera_pardus
ENSUAMG00000007174	TNRC6B	99	94.399	ENSPTIG00000022064	TNRC6B	99	94.632	Panthera_tigris_altaica
ENSUAMG00000007174	TNRC6B	98	97.331	ENSPTRG00000047826	TNRC6B	99	97.252	Pan_troglodytes
ENSUAMG00000007174	TNRC6B	98	91.340	ENSPANG00000009271	TNRC6B	98	93.860	Papio_anubis
ENSUAMG00000007174	TNRC6B	98	88.844	ENSPSIG00000005318	TNRC6B	99	87.360	Pelodiscus_sinensis
ENSUAMG00000007174	TNRC6B	98	94.158	ENSPEMG00000011403	Tnrc6b	100	92.676	Peromyscus_maniculatus_bairdii
ENSUAMG00000007174	TNRC6B	98	87.342	ENSPCIG00000020347	TNRC6B	99	86.701	Phascolarctos_cinereus
ENSUAMG00000007174	TNRC6B	94	39.291	ENSPFOG00000006033	-	96	42.486	Poecilia_formosa
ENSUAMG00000007174	TNRC6B	64	46.264	ENSPLAG00000001418	-	87	47.243	Poecilia_latipinna
ENSUAMG00000007174	TNRC6B	78	54.054	ENSPMEG00000006371	-	59	54.739	Poecilia_mexicana
ENSUAMG00000007174	TNRC6B	98	96.925	ENSPPYG00000011849	TNRC6B	99	95.753	Pongo_abelii
ENSUAMG00000007174	TNRC6B	75	93.004	ENSPCAG00000008739	TNRC6B	76	91.651	Procavia_capensis
ENSUAMG00000007174	TNRC6B	99	96.524	ENSPCOG00000020790	TNRC6B	99	96.524	Propithecus_coquereli
ENSUAMG00000007174	TNRC6B	93	95.238	ENSPVAG00000004975	TNRC6B	94	95.926	Pteropus_vampyrus
ENSUAMG00000007174	TNRC6B	74	43.310	ENSPNAG00000011713	tnrc6b	80	45.118	Pygocentrus_nattereri
ENSUAMG00000007174	TNRC6B	99	93.063	ENSRNOG00000024907	Tnrc6b	100	92.641	Rattus_norvegicus
ENSUAMG00000007174	TNRC6B	99	95.462	ENSRBIG00000035576	TNRC6B	98	97.170	Rhinopithecus_bieti
ENSUAMG00000007174	TNRC6B	99	95.909	ENSRROG00000031135	TNRC6B	99	95.911	Rhinopithecus_roxellana
ENSUAMG00000007174	TNRC6B	99	96.487	ENSSBOG00000029743	TNRC6B	99	96.487	Saimiri_boliviensis_boliviensis
ENSUAMG00000007174	TNRC6B	98	82.262	ENSSHAG00000009692	TNRC6B	99	80.694	Sarcophilus_harrisii
ENSUAMG00000007174	TNRC6B	71	85.403	ENSSARG00000007971	-	73	84.581	Sorex_araneus
ENSUAMG00000007174	TNRC6B	90	82.493	ENSSPUG00000010801	TNRC6B	100	81.721	Sphenodon_punctatus
ENSUAMG00000007174	TNRC6B	98	97.642	ENSSSCG00000000078	TNRC6B	99	96.386	Sus_scrofa
ENSUAMG00000007174	TNRC6B	92	87.932	ENSTGUG00000010138	-	99	86.948	Taeniopygia_guttata
ENSUAMG00000007174	TNRC6B	99	93.333	ENSTTRG00000011465	TNRC6B	98	93.333	Tursiops_truncatus
ENSUAMG00000007174	TNRC6B	99	99.148	ENSUMAG00000014336	TNRC6B	100	100.000	Ursus_maritimus
ENSUAMG00000007174	TNRC6B	68	91.158	ENSVPAG00000001467	TNRC6B	72	92.208	Vicugna_pacos
ENSUAMG00000007174	TNRC6B	100	97.247	ENSVVUG00000007064	TNRC6B	100	97.826	Vulpes_vulpes