EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000007321 (Gene tree)
Gene ID: -
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 39957 bases
Position: chrLZNR01001699.1:84960-124916
Accession: 18676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000008712	ResIII	PF04851.15	7.1e-07	1	1
ENSUAMP00000008712	DEAD	PF00270.29	7.1e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000009818	DDX42-201	4202	-	ENSUAMP00000008712	935 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000007321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000007321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000007321	DDX42	58	38.214	ENSUAMG00000023388	DDX5	78	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000007321	DDX42	100	95.745	ENSG00000198231	DDX42	100	100.000	Homo_sapiens
ENSUAMG00000007321	DDX42	90	76.443	ENSAPOG00000017675	ddx42	99	72.283	Acanthochromis_polyacanthus
ENSUAMG00000007321	DDX42	100	99.465	ENSAMEG00000003200	DDX42	100	99.465	Ailuropoda_melanoleuca
ENSUAMG00000007321	DDX42	84	71.518	ENSACIG00000007376	ddx42	99	72.716	Amphilophus_citrinellus
ENSUAMG00000007321	DDX42	91	76.519	ENSAOCG00000003520	ddx42	99	71.654	Amphiprion_ocellaris
ENSUAMG00000007321	DDX42	100	70.938	ENSAPEG00000000984	ddx42	99	72.403	Amphiprion_percula
ENSUAMG00000007321	DDX42	100	71.308	ENSATEG00000022920	ddx42	99	72.613	Anabas_testudineus
ENSUAMG00000007321	DDX42	100	84.916	ENSAPLG00000010544	DDX42	100	84.062	Anas_platyrhynchos
ENSUAMG00000007321	DDX42	100	84.093	ENSACAG00000003994	DDX42	99	84.266	Anolis_carolinensis
ENSUAMG00000007321	DDX42	100	96.154	ENSANAG00000035693	DDX42	99	97.301	Aotus_nancymaae
ENSUAMG00000007321	DDX42	89	77.180	ENSACLG00000025113	ddx42	99	72.862	Astatotilapia_calliptera
ENSUAMG00000007321	DDX42	80	79.551	ENSAMXG00000011435	ddx42	100	71.008	Astyanax_mexicanus
ENSUAMG00000007321	DDX42	100	95.112	ENSBTAG00000021058	DDX42	98	97.286	Bos_taurus
ENSUAMG00000007321	DDX42	64	52.673	WBGene00008119	C46F11.4	80	52.914	Caenorhabditis_elegans
ENSUAMG00000007321	DDX42	100	96.261	ENSCJAG00000019649	DDX42	99	98.693	Callithrix_jacchus
ENSUAMG00000007321	DDX42	100	98.182	ENSCAFG00000012818	DDX42	100	98.182	Canis_familiaris
ENSUAMG00000007321	DDX42	100	98.289	ENSCAFG00020026631	DDX42	100	98.289	Canis_lupus_dingo
ENSUAMG00000007321	DDX42	100	96.489	ENSCHIG00000014431	DDX42	100	96.489	Capra_hircus
ENSUAMG00000007321	DDX42	100	95.945	ENSTSYG00000001380	DDX42	100	95.945	Carlito_syrichta
ENSUAMG00000007321	DDX42	72	75.740	ENSCAPG00000013621	DDX42	94	75.740	Cavia_aperea
ENSUAMG00000007321	DDX42	100	95.726	ENSCPOG00000005633	DDX42	100	95.726	Cavia_porcellus
ENSUAMG00000007321	DDX42	100	90.919	ENSCCAG00000020612	DDX42	100	95.690	Cebus_capucinus
ENSUAMG00000007321	DDX42	100	96.257	ENSCATG00000030490	DDX42	100	96.257	Cercocebus_atys
ENSUAMG00000007321	DDX42	100	96.150	ENSCLAG00000003497	DDX42	100	96.150	Chinchilla_lanigera
ENSUAMG00000007321	DDX42	100	92.169	ENSCSAG00000003914	DDX42	100	92.169	Chlorocebus_sabaeus
ENSUAMG00000007321	DDX42	79	95.536	ENSCHOG00000006241	DDX42	79	95.536	Choloepus_hoffmanni
ENSUAMG00000007321	DDX42	100	84.848	ENSCPBG00000026682	DDX42	100	85.162	Chrysemys_picta_bellii
ENSUAMG00000007321	DDX42	100	96.364	ENSCANG00000034663	DDX42	99	98.129	Colobus_angolensis_palliatus
ENSUAMG00000007321	DDX42	100	94.551	ENSCGRG00001009775	Ddx42	100	94.551	Cricetulus_griseus_chok1gshd
ENSUAMG00000007321	DDX42	100	94.551	ENSCGRG00000011718	Ddx42	100	94.551	Cricetulus_griseus_crigri
ENSUAMG00000007321	DDX42	89	74.614	ENSCSEG00000021574	ddx42	99	70.776	Cynoglossus_semilaevis
ENSUAMG00000007321	DDX42	100	70.445	ENSCVAG00000011404	ddx42	99	71.156	Cyprinodon_variegatus
ENSUAMG00000007321	DDX42	100	70.335	ENSDARG00000037928	ddx42	99	70.459	Danio_rerio
ENSUAMG00000007321	DDX42	100	90.202	ENSDNOG00000007961	DDX42	100	90.202	Dasypus_novemcinctus
ENSUAMG00000007321	DDX42	100	87.633	ENSDORG00000004199	Ddx42	100	87.633	Dipodomys_ordii
ENSUAMG00000007321	DDX42	65	60.514	FBgn0036104	CG6418	87	56.772	Drosophila_melanogaster
ENSUAMG00000007321	DDX42	80	73.342	ENSEBUG00000001155	ddx42	91	73.210	Eptatretus_burgeri
ENSUAMG00000007321	DDX42	100	97.650	ENSEASG00005013089	DDX42	100	97.650	Equus_asinus_asinus
ENSUAMG00000007321	DDX42	100	97.756	ENSECAG00000022684	DDX42	100	97.756	Equus_caballus
ENSUAMG00000007321	DDX42	67	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSUAMG00000007321	DDX42	100	69.511	ENSELUG00000020593	ddx42	100	70.157	Esox_lucius
ENSUAMG00000007321	DDX42	100	98.503	ENSFCAG00000003499	DDX42	100	98.503	Felis_catus
ENSUAMG00000007321	DDX42	94	84.967	ENSFALG00000004675	DDX42	72	89.316	Ficedula_albicollis
ENSUAMG00000007321	DDX42	100	96.051	ENSFDAG00000020516	DDX42	100	96.051	Fukomys_damarensis
ENSUAMG00000007321	DDX42	100	69.873	ENSFHEG00000023290	ddx42	99	70.471	Fundulus_heteroclitus
ENSUAMG00000007321	DDX42	75	78.138	ENSGMOG00000004595	ddx42	79	78.138	Gadus_morhua
ENSUAMG00000007321	DDX42	100	83.385	ENSGALG00000000581	DDX42	100	82.238	Gallus_gallus
ENSUAMG00000007321	DDX42	89	74.822	ENSGAFG00000011846	ddx42	96	72.547	Gambusia_affinis
ENSUAMG00000007321	DDX42	100	68.158	ENSGACG00000009782	ddx42	100	67.766	Gasterosteus_aculeatus
ENSUAMG00000007321	DDX42	100	85.236	ENSGAGG00000024411	DDX42	99	85.026	Gopherus_agassizii
ENSUAMG00000007321	DDX42	100	96.150	ENSGGOG00000006779	DDX42	100	96.150	Gorilla_gorilla
ENSUAMG00000007321	DDX42	89	77.419	ENSHBUG00000008705	ddx42	99	73.073	Haplochromis_burtoni
ENSUAMG00000007321	DDX42	100	91.444	ENSHGLG00000010024	DDX42	100	91.444	Heterocephalus_glaber_female
ENSUAMG00000007321	DDX42	94	73.029	ENSHGLG00100007138	-	95	73.029	Heterocephalus_glaber_male
ENSUAMG00000007321	DDX42	100	96.364	ENSHGLG00100004479	-	100	96.364	Heterocephalus_glaber_male
ENSUAMG00000007321	DDX42	84	77.962	ENSHCOG00000003357	ddx42	96	75.299	Hippocampus_comes
ENSUAMG00000007321	DDX42	80	79.657	ENSIPUG00000013327	ddx42	100	70.253	Ictalurus_punctatus
ENSUAMG00000007321	DDX42	100	97.545	ENSSTOG00000008922	DDX42	100	97.545	Ictidomys_tridecemlineatus
ENSUAMG00000007321	DDX42	100	94.973	ENSJJAG00000011727	Ddx42	100	94.973	Jaculus_jaculus
ENSUAMG00000007321	DDX42	100	70.053	ENSKMAG00000009914	ddx42	99	72.046	Kryptolebias_marmoratus
ENSUAMG00000007321	DDX42	89	71.260	ENSLBEG00000004687	ddx42	100	66.945	Labrus_bergylta
ENSUAMG00000007321	DDX42	99	76.972	ENSLACG00000013476	DDX42	97	78.321	Latimeria_chalumnae
ENSUAMG00000007321	DDX42	100	74.066	ENSLOCG00000011764	ddx42	100	74.337	Lepisosteus_oculatus
ENSUAMG00000007321	DDX42	100	97.115	ENSLAFG00000003249	DDX42	100	97.115	Loxodonta_africana
ENSUAMG00000007321	DDX42	100	96.257	ENSMFAG00000031356	DDX42	100	96.257	Macaca_fascicularis
ENSUAMG00000007321	DDX42	100	95.508	ENSMMUG00000016762	DDX42	100	95.493	Macaca_mulatta
ENSUAMG00000007321	DDX42	100	96.257	ENSMNEG00000038250	DDX42	100	96.257	Macaca_nemestrina
ENSUAMG00000007321	DDX42	100	95.957	ENSMLEG00000043080	DDX42	100	95.957	Mandrillus_leucophaeus
ENSUAMG00000007321	DDX42	90	77.187	ENSMAMG00000021888	ddx42	98	73.326	Mastacembelus_armatus
ENSUAMG00000007321	DDX42	89	77.180	ENSMZEG00005023103	ddx42	99	72.862	Maylandia_zebra
ENSUAMG00000007321	DDX42	100	83.801	ENSMGAG00000001822	DDX42	100	83.506	Meleagris_gallopavo
ENSUAMG00000007321	DDX42	75	96.733	ENSMAUG00000020774	-	94	96.733	Mesocricetus_auratus
ENSUAMG00000007321	DDX42	100	97.115	ENSMICG00000009952	DDX42	100	96.474	Microcebus_murinus
ENSUAMG00000007321	DDX42	100	94.017	ENSMOCG00000015504	Ddx42	100	93.803	Microtus_ochrogaster
ENSUAMG00000007321	DDX42	89	72.262	ENSMMOG00000016963	ddx42	87	70.023	Mola_mola
ENSUAMG00000007321	DDX42	50	98.073	ENSMODG00000009917	-	98	98.073	Monodelphis_domestica
ENSUAMG00000007321	DDX42	100	72.204	ENSMALG00000007800	ddx42	99	72.476	Monopterus_albus
ENSUAMG00000007321	DDX42	100	95.192	MGP_CAROLIEiJ_G0017314	Ddx42	100	95.192	Mus_caroli
ENSUAMG00000007321	DDX42	100	95.192	ENSMUSG00000020705	Ddx42	100	95.192	Mus_musculus
ENSUAMG00000007321	DDX42	78	99.404	MGP_PahariEiJ_G0018444	-	100	99.404	Mus_pahari
ENSUAMG00000007321	DDX42	100	95.192	MGP_SPRETEiJ_G0018158	Ddx42	100	95.192	Mus_spretus
ENSUAMG00000007321	DDX42	100	97.979	ENSMPUG00000014921	DDX42	100	97.979	Mustela_putorius_furo
ENSUAMG00000007321	DDX42	100	95.789	ENSMLUG00000011645	DDX42	100	95.789	Myotis_lucifugus
ENSUAMG00000007321	DDX42	100	94.759	ENSNGAG00000021897	Ddx42	100	94.759	Nannospalax_galili
ENSUAMG00000007321	DDX42	89	75.866	ENSNBRG00000004466	ddx42	99	71.700	Neolamprologus_brichardi
ENSUAMG00000007321	DDX42	100	96.150	ENSNLEG00000004248	DDX42	99	97.989	Nomascus_leucogenys
ENSUAMG00000007321	DDX42	74	82.788	ENSMEUG00000013227	-	85	82.788	Notamacropus_eugenii
ENSUAMG00000007321	DDX42	100	95.634	ENSOPRG00000014960	DDX42	100	95.634	Ochotona_princeps
ENSUAMG00000007321	DDX42	100	92.513	ENSODEG00000007810	DDX42	100	92.513	Octodon_degus
ENSUAMG00000007321	DDX42	89	77.180	ENSONIG00000000734	ddx42	99	72.967	Oreochromis_niloticus
ENSUAMG00000007321	DDX42	58	92.393	ENSOANG00000000265	DDX42	100	92.393	Ornithorhynchus_anatinus
ENSUAMG00000007321	DDX42	95	96.188	ENSOCUG00000004304	DDX42	88	96.188	Oryctolagus_cuniculus
ENSUAMG00000007321	DDX42	100	70.899	ENSORLG00000002395	ddx42	100	70.159	Oryzias_latipes
ENSUAMG00000007321	DDX42	100	71.142	ENSORLG00020011621	ddx42	100	71.519	Oryzias_latipes_hni
ENSUAMG00000007321	DDX42	100	71.036	ENSORLG00015004487	ddx42	100	71.519	Oryzias_latipes_hsok
ENSUAMG00000007321	DDX42	80	82.290	ENSOMEG00000020093	ddx42	100	72.410	Oryzias_melastigma
ENSUAMG00000007321	DDX42	100	96.592	ENSOGAG00000006872	DDX42	100	96.592	Otolemur_garnettii
ENSUAMG00000007321	DDX42	100	95.675	ENSOARG00000013540	DDX42	100	95.675	Ovis_aries
ENSUAMG00000007321	DDX42	100	96.364	ENSPPAG00000007496	DDX42	100	96.364	Pan_paniscus
ENSUAMG00000007321	DDX42	100	98.289	ENSPPRG00000002740	DDX42	100	98.289	Panthera_pardus
ENSUAMG00000007321	DDX42	100	98.075	ENSPTIG00000009932	DDX42	100	98.075	Panthera_tigris_altaica
ENSUAMG00000007321	DDX42	100	96.364	ENSPTRG00000009523	DDX42	100	96.364	Pan_troglodytes
ENSUAMG00000007321	DDX42	100	96.257	ENSPANG00000020990	DDX42	100	96.257	Papio_anubis
ENSUAMG00000007321	DDX42	100	69.755	ENSPKIG00000002901	ddx42	100	70.394	Paramormyrops_kingsleyae
ENSUAMG00000007321	DDX42	85	92.298	ENSPSIG00000010289	DDX42	98	91.995	Pelodiscus_sinensis
ENSUAMG00000007321	DDX42	100	66.737	ENSPMGG00000009323	ddx42	100	68.538	Periophthalmus_magnuspinnatus
ENSUAMG00000007321	DDX42	100	94.771	ENSPEMG00000006755	Ddx42	100	94.771	Peromyscus_maniculatus_bairdii
ENSUAMG00000007321	DDX42	80	72.346	ENSPMAG00000005580	ddx42	100	73.132	Petromyzon_marinus
ENSUAMG00000007321	DDX42	100	91.860	ENSPCIG00000009093	DDX42	100	91.543	Phascolarctos_cinereus
ENSUAMG00000007321	DDX42	100	70.478	ENSPFOG00000014104	ddx42	100	71.146	Poecilia_formosa
ENSUAMG00000007321	DDX42	100	70.478	ENSPLAG00000010522	ddx42	100	71.146	Poecilia_latipinna
ENSUAMG00000007321	DDX42	100	70.803	ENSPMEG00000010744	ddx42	100	71.473	Poecilia_mexicana
ENSUAMG00000007321	DDX42	100	70.010	ENSPREG00000009926	ddx42	100	71.132	Poecilia_reticulata
ENSUAMG00000007321	DDX42	100	94.068	ENSPPYG00000008531	DDX42	100	94.068	Pongo_abelii
ENSUAMG00000007321	DDX42	92	91.183	ENSPCAG00000002474	DDX42	100	91.183	Procavia_capensis
ENSUAMG00000007321	DDX42	100	87.179	ENSPCOG00000001559	DDX42	99	88.679	Propithecus_coquereli
ENSUAMG00000007321	DDX42	100	93.490	ENSPVAG00000000160	DDX42	100	93.490	Pteropus_vampyrus
ENSUAMG00000007321	DDX42	74	74.928	ENSPNYG00000013954	ddx42	97	70.112	Pundamilia_nyererei
ENSUAMG00000007321	DDX42	77	80.654	ENSPNAG00000017352	ddx42	99	69.782	Pygocentrus_nattereri
ENSUAMG00000007321	DDX42	100	95.192	ENSRNOG00000009474	Ddx42	100	95.192	Rattus_norvegicus
ENSUAMG00000007321	DDX42	100	96.257	ENSRBIG00000004781	DDX42	99	97.986	Rhinopithecus_bieti
ENSUAMG00000007321	DDX42	100	96.257	ENSRROG00000029794	DDX42	100	96.257	Rhinopithecus_roxellana
ENSUAMG00000007321	DDX42	100	96.154	ENSSBOG00000029624	DDX42	100	96.154	Saimiri_boliviensis_boliviensis
ENSUAMG00000007321	DDX42	100	92.072	ENSSHAG00000012896	-	100	91.755	Sarcophilus_harrisii
ENSUAMG00000007321	DDX42	71	62.074	ENSSHAG00000007919	-	99	61.630	Sarcophilus_harrisii
ENSUAMG00000007321	DDX42	81	80.438	ENSSFOG00015014064	ddx42	83	80.438	Scleropages_formosus
ENSUAMG00000007321	DDX42	100	71.005	ENSSMAG00000009077	ddx42	100	71.117	Scophthalmus_maximus
ENSUAMG00000007321	DDX42	99	72.650	ENSSDUG00000022221	ddx42	99	72.345	Seriola_dumerili
ENSUAMG00000007321	DDX42	99	72.417	ENSSLDG00000018483	ddx42	100	71.716	Seriola_lalandi_dorsalis
ENSUAMG00000007321	DDX42	100	96.368	ENSSARG00000009847	DDX42	100	96.368	Sorex_araneus
ENSUAMG00000007321	DDX42	100	84.916	ENSSPUG00000018806	DDX42	100	83.612	Sphenodon_punctatus
ENSUAMG00000007321	DDX42	90	76.561	ENSSPAG00000013055	ddx42	99	72.199	Stegastes_partitus
ENSUAMG00000007321	DDX42	86	95.043	ENSSSCG00000017289	DDX42	97	95.533	Sus_scrofa
ENSUAMG00000007321	DDX42	100	83.718	ENSTGUG00000001931	DDX42	100	83.718	Taeniopygia_guttata
ENSUAMG00000007321	DDX42	100	69.735	ENSTRUG00000010711	ddx42	99	81.333	Takifugu_rubripes
ENSUAMG00000007321	DDX42	81	93.684	ENSTBEG00000010159	DDX42	99	93.684	Tupaia_belangeri
ENSUAMG00000007321	DDX42	100	97.118	ENSTTRG00000006962	DDX42	100	97.118	Tursiops_truncatus
ENSUAMG00000007321	DDX42	100	99.144	ENSUMAG00000017438	DDX42	100	99.144	Ursus_maritimus
ENSUAMG00000007321	DDX42	100	87.714	ENSVPAG00000009633	DDX42	100	87.714	Vicugna_pacos
ENSUAMG00000007321	DDX42	100	98.503	ENSVVUG00000006095	DDX42	100	98.503	Vulpes_vulpes
ENSUAMG00000007321	DDX42	100	76.161	ENSXETG00000003245	ddx42	100	75.905	Xenopus_tropicalis
ENSUAMG00000007321	DDX42	85	70.980	ENSXCOG00000017560	ddx42	97	70.802	Xiphophorus_couchianus
ENSUAMG00000007321	DDX42	100	71.732	ENSXMAG00000008138	ddx42	100	71.792	Xiphophorus_maculatus