EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000007344 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 8408 bases
Position: chrLZNR01003681.1:45713-54120
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000008743	R3H	PF01424.22	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000009853	R3HCC1-201	1323	-	ENSUAMP00000008743	440 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000007344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000007344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000007344	R3HCC1	98	78.341	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSUAMG00000007344	R3HCC1	66	44.079	ENSAPOG00000003616	r3hcc1	91	32.326	Acanthochromis_polyacanthus
ENSUAMG00000007344	R3HCC1	100	95.455	ENSAMEG00000002963	R3HCC1	92	95.455	Ailuropoda_melanoleuca
ENSUAMG00000007344	R3HCC1	96	32.397	ENSACIG00000017144	r3hcc1	79	43.939	Amphilophus_citrinellus
ENSUAMG00000007344	R3HCC1	60	46.212	ENSAOCG00000003945	r3hcc1	68	44.667	Amphiprion_ocellaris
ENSUAMG00000007344	R3HCC1	60	46.212	ENSAPEG00000003613	r3hcc1	69	43.137	Amphiprion_percula
ENSUAMG00000007344	R3HCC1	60	43.151	ENSATEG00000023860	r3hcc1	69	42.500	Anabas_testudineus
ENSUAMG00000007344	R3HCC1	97	46.591	ENSACAG00000016627	R3HCC1	96	47.300	Anolis_carolinensis
ENSUAMG00000007344	R3HCC1	99	78.670	ENSANAG00000036169	R3HCC1	94	78.899	Aotus_nancymaae
ENSUAMG00000007344	R3HCC1	100	75.847	ENSBTAG00000025830	R3HCC1	97	76.072	Bos_taurus
ENSUAMG00000007344	R3HCC1	98	79.080	ENSCJAG00000020118	R3HCC1	99	71.034	Callithrix_jacchus
ENSUAMG00000007344	R3HCC1	100	88.182	ENSCAFG00000009210	R3HCC1	96	88.182	Canis_familiaris
ENSUAMG00000007344	R3HCC1	83	86.339	ENSCAFG00020012870	R3HCC1	86	86.339	Canis_lupus_dingo
ENSUAMG00000007344	R3HCC1	100	71.179	ENSCHIG00000009107	R3HCC1	100	71.397	Capra_hircus
ENSUAMG00000007344	R3HCC1	98	79.263	ENSTSYG00000000511	R3HCC1	77	79.263	Carlito_syrichta
ENSUAMG00000007344	R3HCC1	89	57.639	ENSCAPG00000015813	R3HCC1	100	56.944	Cavia_aperea
ENSUAMG00000007344	R3HCC1	99	64.693	ENSCPOG00000009696	R3HCC1	100	64.059	Cavia_porcellus
ENSUAMG00000007344	R3HCC1	98	78.161	ENSCCAG00000037811	R3HCC1	91	78.391	Cebus_capucinus
ENSUAMG00000007344	R3HCC1	98	77.880	ENSCATG00000032971	R3HCC1	98	70.737	Cercocebus_atys
ENSUAMG00000007344	R3HCC1	100	72.273	ENSCLAG00000015556	R3HCC1	85	72.273	Chinchilla_lanigera
ENSUAMG00000007344	R3HCC1	98	78.111	ENSCSAG00000016250	R3HCC1	90	78.341	Chlorocebus_sabaeus
ENSUAMG00000007344	R3HCC1	98	75.286	ENSCHOG00000000396	R3HCC1	95	75.973	Choloepus_hoffmanni
ENSUAMG00000007344	R3HCC1	98	78.802	ENSCANG00000029441	R3HCC1	98	71.429	Colobus_angolensis_palliatus
ENSUAMG00000007344	R3HCC1	99	61.250	ENSCGRG00001014977	R3hcc1	99	62.083	Cricetulus_griseus_chok1gshd
ENSUAMG00000007344	R3HCC1	99	61.250	ENSCGRG00000004454	R3hcc1	99	62.083	Cricetulus_griseus_crigri
ENSUAMG00000007344	R3HCC1	95	33.259	ENSCSEG00000005748	r3hcc1	76	47.333	Cynoglossus_semilaevis
ENSUAMG00000007344	R3HCC1	81	32.181	ENSCVAG00000002640	r3hcc1	95	31.383	Cyprinodon_variegatus
ENSUAMG00000007344	R3HCC1	96	34.353	ENSDARG00000099593	r3hcc1	98	34.515	Danio_rerio
ENSUAMG00000007344	R3HCC1	98	78.009	ENSDNOG00000007168	R3HCC1	91	78.009	Dasypus_novemcinctus
ENSUAMG00000007344	R3HCC1	98	62.630	ENSDORG00000026365	R3hcc1	99	63.180	Dipodomys_ordii
ENSUAMG00000007344	R3HCC1	99	67.277	ENSETEG00000001147	R3HCC1	96	67.048	Echinops_telfairi
ENSUAMG00000007344	R3HCC1	100	83.484	ENSEASG00005018782	R3HCC1	81	83.258	Equus_asinus_asinus
ENSUAMG00000007344	R3HCC1	100	82.353	ENSECAG00000025013	R3HCC1	98	82.579	Equus_caballus
ENSUAMG00000007344	R3HCC1	98	76.279	ENSEEUG00000011918	R3HCC1	95	76.279	Erinaceus_europaeus
ENSUAMG00000007344	R3HCC1	93	35.862	ENSELUG00000023650	r3hcc1	78	41.221	Esox_lucius
ENSUAMG00000007344	R3HCC1	100	90.455	ENSFCAG00000012395	R3HCC1	97	90.682	Felis_catus
ENSUAMG00000007344	R3HCC1	99	66.307	ENSFDAG00000001572	R3HCC1	99	66.307	Fukomys_damarensis
ENSUAMG00000007344	R3HCC1	96	35.484	ENSGAFG00000008747	-	91	34.158	Gambusia_affinis
ENSUAMG00000007344	R3HCC1	96	33.718	ENSGACG00000008447	r3hcc1	95	33.718	Gasterosteus_aculeatus
ENSUAMG00000007344	R3HCC1	98	79.167	ENSGGOG00000013817	R3HCC1	99	79.167	Gorilla_gorilla
ENSUAMG00000007344	R3HCC1	99	70.805	ENSHGLG00000010517	R3HCC1	91	70.159	Heterocephalus_glaber_female
ENSUAMG00000007344	R3HCC1	99	70.805	ENSHGLG00100006388	R3HCC1	91	70.159	Heterocephalus_glaber_male
ENSUAMG00000007344	R3HCC1	70	43.030	ENSHCOG00000011745	r3hcc1	71	45.098	Hippocampus_comes
ENSUAMG00000007344	R3HCC1	97	34.615	ENSIPUG00000024504	r3hcc1	87	37.104	Ictalurus_punctatus
ENSUAMG00000007344	R3HCC1	99	66.213	ENSSTOG00000027130	R3HCC1	94	66.213	Ictidomys_tridecemlineatus
ENSUAMG00000007344	R3HCC1	98	65.795	ENSJJAG00000013075	R3hcc1	99	65.795	Jaculus_jaculus
ENSUAMG00000007344	R3HCC1	58	46.212	ENSKMAG00000000286	r3hcc1	69	43.333	Kryptolebias_marmoratus
ENSUAMG00000007344	R3HCC1	97	41.031	ENSLACG00000011894	R3HCC1	97	40.807	Latimeria_chalumnae
ENSUAMG00000007344	R3HCC1	97	35.281	ENSLOCG00000015442	r3hcc1	99	34.772	Lepisosteus_oculatus
ENSUAMG00000007344	R3HCC1	99	70.440	ENSLAFG00000016137	R3HCC1	95	70.231	Loxodonta_africana
ENSUAMG00000007344	R3HCC1	98	77.650	ENSMFAG00000032894	R3HCC1	98	70.507	Macaca_fascicularis
ENSUAMG00000007344	R3HCC1	98	77.650	ENSMMUG00000016655	R3HCC1	98	70.507	Macaca_mulatta
ENSUAMG00000007344	R3HCC1	98	77.650	ENSMNEG00000043283	R3HCC1	98	70.507	Macaca_nemestrina
ENSUAMG00000007344	R3HCC1	98	77.880	ENSMLEG00000030147	R3HCC1	98	70.737	Mandrillus_leucophaeus
ENSUAMG00000007344	R3HCC1	91	31.643	ENSMAMG00000018146	r3hcc1	98	31.540	Mastacembelus_armatus
ENSUAMG00000007344	R3HCC1	97	45.475	ENSMGAG00000001356	R3HCC1	90	45.475	Meleagris_gallopavo
ENSUAMG00000007344	R3HCC1	55	67.623	ENSMAUG00000016096	R3hcc1	99	62.633	Mesocricetus_auratus
ENSUAMG00000007344	R3HCC1	99	77.931	ENSMICG00000011146	R3HCC1	93	78.851	Microcebus_murinus
ENSUAMG00000007344	R3HCC1	99	61.475	ENSMOCG00000018508	R3hcc1	99	61.885	Microtus_ochrogaster
ENSUAMG00000007344	R3HCC1	97	49.775	ENSMODG00000016809	-	99	49.324	Monodelphis_domestica
ENSUAMG00000007344	R3HCC1	91	30.733	ENSMALG00000000731	r3hcc1	98	30.733	Monopterus_albus
ENSUAMG00000007344	R3HCC1	98	61.728	MGP_CAROLIEiJ_G0019467	R3hcc1	99	58.727	Mus_caroli
ENSUAMG00000007344	R3HCC1	98	61.523	ENSMUSG00000034194	R3hcc1	98	62.268	Mus_musculus
ENSUAMG00000007344	R3HCC1	98	60.931	MGP_PahariEiJ_G0030484	R3hcc1	82	76.829	Mus_pahari
ENSUAMG00000007344	R3HCC1	98	61.475	MGP_SPRETEiJ_G0020359	R3hcc1	98	62.218	Mus_spretus
ENSUAMG00000007344	R3HCC1	100	91.591	ENSMPUG00000003457	R3HCC1	87	91.591	Mustela_putorius_furo
ENSUAMG00000007344	R3HCC1	99	78.132	ENSMLUG00000000266	R3HCC1	92	78.815	Myotis_lucifugus
ENSUAMG00000007344	R3HCC1	99	69.298	ENSNGAG00000016747	R3hcc1	99	68.860	Nannospalax_galili
ENSUAMG00000007344	R3HCC1	90	76.826	ENSNLEG00000015944	R3HCC1	85	77.078	Nomascus_leucogenys
ENSUAMG00000007344	R3HCC1	98	55.079	ENSMEUG00000010587	R3HCC1	98	55.682	Notamacropus_eugenii
ENSUAMG00000007344	R3HCC1	99	68.421	ENSOPRG00000013390	R3HCC1	94	68.421	Ochotona_princeps
ENSUAMG00000007344	R3HCC1	98	65.591	ENSODEG00000007529	R3HCC1	99	66.173	Octodon_degus
ENSUAMG00000007344	R3HCC1	98	59.502	ENSOANG00000013877	R3HCC1	96	60.586	Ornithorhynchus_anatinus
ENSUAMG00000007344	R3HCC1	99	66.743	ENSOCUG00000023554	R3HCC1	86	66.743	Oryctolagus_cuniculus
ENSUAMG00000007344	R3HCC1	91	33.744	ENSORLG00000016816	r3hcc1	97	32.763	Oryzias_latipes
ENSUAMG00000007344	R3HCC1	91	32.843	ENSORLG00020012005	r3hcc1	97	32.274	Oryzias_latipes_hni
ENSUAMG00000007344	R3HCC1	91	32.530	ENSORLG00015007018	r3hcc1	97	32.763	Oryzias_latipes_hsok
ENSUAMG00000007344	R3HCC1	92	33.649	ENSOMEG00000000816	r3hcc1	72	42.308	Oryzias_melastigma
ENSUAMG00000007344	R3HCC1	99	73.733	ENSOGAG00000001291	R3HCC1	91	73.733	Otolemur_garnettii
ENSUAMG00000007344	R3HCC1	98	76.674	ENSOARG00000010146	R3HCC1	95	76.905	Ovis_aries
ENSUAMG00000007344	R3HCC1	98	78.341	ENSPPAG00000033165	R3HCC1	99	78.571	Pan_paniscus
ENSUAMG00000007344	R3HCC1	98	90.509	ENSPPRG00000002522	R3HCC1	99	90.741	Panthera_pardus
ENSUAMG00000007344	R3HCC1	90	89.421	ENSPTIG00000011230	R3HCC1	95	89.698	Panthera_tigris_altaica
ENSUAMG00000007344	R3HCC1	98	79.032	ENSPTRG00000020076	R3HCC1	99	73.041	Pan_troglodytes
ENSUAMG00000007344	R3HCC1	98	77.650	ENSPANG00000000453	R3HCC1	98	70.507	Papio_anubis
ENSUAMG00000007344	R3HCC1	89	37.010	ENSPKIG00000014426	-	95	35.980	Paramormyrops_kingsleyae
ENSUAMG00000007344	R3HCC1	89	37.438	ENSPKIG00000020397	-	95	37.284	Paramormyrops_kingsleyae
ENSUAMG00000007344	R3HCC1	97	48.124	ENSPSIG00000017664	R3HCC1	97	47.682	Pelodiscus_sinensis
ENSUAMG00000007344	R3HCC1	99	62.839	ENSPEMG00000007118	R3hcc1	99	63.048	Peromyscus_maniculatus_bairdii
ENSUAMG00000007344	R3HCC1	89	50.119	ENSPCIG00000022718	-	83	50.361	Phascolarctos_cinereus
ENSUAMG00000007344	R3HCC1	96	34.943	ENSPFOG00000022301	r3hcc1	90	34.240	Poecilia_formosa
ENSUAMG00000007344	R3HCC1	96	34.943	ENSPLAG00000010794	r3hcc1	90	33.485	Poecilia_latipinna
ENSUAMG00000007344	R3HCC1	96	34.943	ENSPMEG00000022515	r3hcc1	90	34.240	Poecilia_mexicana
ENSUAMG00000007344	R3HCC1	96	34.773	ENSPREG00000000713	r3hcc1	90	34.773	Poecilia_reticulata
ENSUAMG00000007344	R3HCC1	90	77.750	ENSPPYG00000018436	R3HCC1	99	78.000	Pongo_abelii
ENSUAMG00000007344	R3HCC1	75	83.553	ENSPCAG00000012229	R3HCC1	72	83.553	Procavia_capensis
ENSUAMG00000007344	R3HCC1	99	77.397	ENSPCOG00000027554	R3HCC1	99	78.621	Propithecus_coquereli
ENSUAMG00000007344	R3HCC1	98	77.471	ENSPVAG00000009829	R3HCC1	95	77.471	Pteropus_vampyrus
ENSUAMG00000007344	R3HCC1	65	45.070	ENSPNAG00000023875	r3hcc1	74	45.070	Pygocentrus_nattereri
ENSUAMG00000007344	R3HCC1	98	62.810	ENSRNOG00000016777	AABR07018321.1	81	62.526	Rattus_norvegicus
ENSUAMG00000007344	R3HCC1	98	79.032	ENSRBIG00000028045	R3HCC1	99	79.263	Rhinopithecus_bieti
ENSUAMG00000007344	R3HCC1	98	79.032	ENSRROG00000031126	R3HCC1	98	71.659	Rhinopithecus_roxellana
ENSUAMG00000007344	R3HCC1	98	77.701	ENSSBOG00000022590	R3HCC1	99	77.931	Saimiri_boliviensis_boliviensis
ENSUAMG00000007344	R3HCC1	98	51.591	ENSSHAG00000016526	-	97	51.591	Sarcophilus_harrisii
ENSUAMG00000007344	R3HCC1	90	36.935	ENSSFOG00015013507	r3hcc1	98	36.181	Scleropages_formosus
ENSUAMG00000007344	R3HCC1	91	31.905	ENSSMAG00000008647	r3hcc1	98	31.905	Scophthalmus_maximus
ENSUAMG00000007344	R3HCC1	68	81.061	ENSSARG00000013514	-	69	81.061	Sorex_araneus
ENSUAMG00000007344	R3HCC1	93	33.179	ENSSPAG00000013497	r3hcc1	68	46.667	Stegastes_partitus
ENSUAMG00000007344	R3HCC1	100	80.090	ENSSSCG00000039915	-	93	80.317	Sus_scrofa
ENSUAMG00000007344	R3HCC1	97	72.494	ENSSSCG00000037347	-	88	72.960	Sus_scrofa
ENSUAMG00000007344	R3HCC1	95	31.829	ENSTRUG00000015880	r3hcc1	98	31.591	Takifugu_rubripes
ENSUAMG00000007344	R3HCC1	98	72.917	ENSTTRG00000012247	R3HCC1	94	72.917	Tursiops_truncatus
ENSUAMG00000007344	R3HCC1	100	88.409	ENSVVUG00000005056	R3HCC1	96	88.409	Vulpes_vulpes
ENSUAMG00000007344	R3HCC1	93	34.375	ENSXCOG00000017626	r3hcc1	88	33.491	Xiphophorus_couchianus
ENSUAMG00000007344	R3HCC1	96	34.332	ENSXMAG00000018375	r3hcc1	91	33.416	Xiphophorus_maculatus