EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000007583 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 32846 bases
Position: chrLZNR01003693.1:230176-263021
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000009070	MRP-S27	PF10037.9	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000010208	PTCD2-201	1970	-	ENSUAMP00000009070	427 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000007583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000007583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000007583	PTCD2	90	78.182	ENSG00000049883	PTCD2	100	79.803	Homo_sapiens
ENSUAMG00000007583	PTCD2	85	45.628	ENSAPOG00000020682	ptcd2	95	45.628	Acanthochromis_polyacanthus
ENSUAMG00000007583	PTCD2	91	97.938	ENSAMEG00000007194	PTCD2	100	97.938	Ailuropoda_melanoleuca
ENSUAMG00000007583	PTCD2	81	40.401	ENSACIG00000002053	ptcd2	100	40.401	Amphilophus_citrinellus
ENSUAMG00000007583	PTCD2	87	44.652	ENSAOCG00000006616	ptcd2	95	44.652	Amphiprion_ocellaris
ENSUAMG00000007583	PTCD2	85	44.772	ENSAPEG00000022926	ptcd2	93	44.772	Amphiprion_percula
ENSUAMG00000007583	PTCD2	87	56.720	ENSACAG00000009747	PTCD2	93	56.720	Anolis_carolinensis
ENSUAMG00000007583	PTCD2	90	79.740	ENSANAG00000029353	PTCD2	99	79.740	Aotus_nancymaae
ENSUAMG00000007583	PTCD2	81	45.845	ENSACLG00000027742	ptcd2	89	45.845	Astatotilapia_calliptera
ENSUAMG00000007583	PTCD2	76	45.511	ENSAMXG00000029404	ptcd2	86	45.511	Astyanax_mexicanus
ENSUAMG00000007583	PTCD2	90	80.990	ENSBTAG00000014675	PTCD2	100	80.990	Bos_taurus
ENSUAMG00000007583	PTCD2	90	79.221	ENSCJAG00000016364	PTCD2	99	79.221	Callithrix_jacchus
ENSUAMG00000007583	PTCD2	100	82.904	ENSCAFG00000007982	PTCD2	100	82.904	Canis_familiaris
ENSUAMG00000007583	PTCD2	81	89.017	ENSCAFG00020019147	PTCD2	97	89.017	Canis_lupus_dingo
ENSUAMG00000007583	PTCD2	90	81.771	ENSCHIG00000017118	PTCD2	100	81.771	Capra_hircus
ENSUAMG00000007583	PTCD2	90	71.279	ENSCPOG00000040168	PTCD2	100	71.279	Cavia_porcellus
ENSUAMG00000007583	PTCD2	90	78.701	ENSCCAG00000029389	-	99	78.701	Cebus_capucinus
ENSUAMG00000007583	PTCD2	73	74.839	ENSCCAG00000021996	-	95	74.675	Cebus_capucinus
ENSUAMG00000007583	PTCD2	90	76.501	ENSCATG00000019069	PTCD2	100	76.501	Cercocebus_atys
ENSUAMG00000007583	PTCD2	90	74.413	ENSCLAG00000000072	PTCD2	100	74.413	Chinchilla_lanigera
ENSUAMG00000007583	PTCD2	90	78.590	ENSCSAG00000015623	PTCD2	100	78.590	Chlorocebus_sabaeus
ENSUAMG00000007583	PTCD2	81	58.621	ENSCHOG00000010634	PTCD2	100	58.621	Choloepus_hoffmanni
ENSUAMG00000007583	PTCD2	91	54.756	ENSCPBG00000000216	PTCD2	99	54.756	Chrysemys_picta_bellii
ENSUAMG00000007583	PTCD2	91	76.289	ENSCANG00000035636	PTCD2	100	76.289	Colobus_angolensis_palliatus
ENSUAMG00000007583	PTCD2	100	67.213	ENSCGRG00001015289	Ptcd2	93	67.213	Cricetulus_griseus_chok1gshd
ENSUAMG00000007583	PTCD2	100	67.213	ENSCGRG00000006193	Ptcd2	93	67.213	Cricetulus_griseus_crigri
ENSUAMG00000007583	PTCD2	81	44.986	ENSCVAG00000001285	ptcd2	89	44.986	Cyprinodon_variegatus
ENSUAMG00000007583	PTCD2	87	45.040	ENSDARG00000035391	ptcd2	97	45.040	Danio_rerio
ENSUAMG00000007583	PTCD2	90	77.807	ENSDNOG00000008719	PTCD2	100	77.807	Dasypus_novemcinctus
ENSUAMG00000007583	PTCD2	90	76.744	ENSDORG00000004921	Ptcd2	100	76.744	Dipodomys_ordii
ENSUAMG00000007583	PTCD2	91	69.588	ENSETEG00000016542	PTCD2	99	69.588	Echinops_telfairi
ENSUAMG00000007583	PTCD2	90	79.896	ENSEASG00005018038	PTCD2	100	79.896	Equus_asinus_asinus
ENSUAMG00000007583	PTCD2	91	79.124	ENSECAG00000007022	PTCD2	99	79.124	Equus_caballus
ENSUAMG00000007583	PTCD2	90	72.917	ENSEEUG00000014031	PTCD2	99	72.917	Erinaceus_europaeus
ENSUAMG00000007583	PTCD2	83	48.870	ENSELUG00000003584	ptcd2	92	48.870	Esox_lucius
ENSUAMG00000007583	PTCD2	96	79.126	ENSFCAG00000045432	PTCD2	89	79.126	Felis_catus
ENSUAMG00000007583	PTCD2	77	50.765	ENSFALG00000010299	PTCD2	99	50.765	Ficedula_albicollis
ENSUAMG00000007583	PTCD2	90	73.629	ENSFDAG00000018461	PTCD2	100	73.629	Fukomys_damarensis
ENSUAMG00000007583	PTCD2	81	49.573	ENSGMOG00000003637	ptcd2	91	49.573	Gadus_morhua
ENSUAMG00000007583	PTCD2	83	50.142	ENSGALG00000038260	PTCD2	93	50.142	Gallus_gallus
ENSUAMG00000007583	PTCD2	92	55.980	ENSGAGG00000021952	PTCD2	98	55.980	Gopherus_agassizii
ENSUAMG00000007583	PTCD2	90	78.182	ENSGGOG00000010695	PTCD2	99	78.182	Gorilla_gorilla
ENSUAMG00000007583	PTCD2	91	43.990	ENSHBUG00000009191	ptcd2	99	43.990	Haplochromis_burtoni
ENSUAMG00000007583	PTCD2	87	76.011	ENSHGLG00000001234	PTCD2	97	76.011	Heterocephalus_glaber_female
ENSUAMG00000007583	PTCD2	90	74.413	ENSHGLG00100015419	PTCD2	100	74.413	Heterocephalus_glaber_male
ENSUAMG00000007583	PTCD2	85	46.556	ENSHCOG00000001703	ptcd2	92	46.556	Hippocampus_comes
ENSUAMG00000007583	PTCD2	77	45.152	ENSIPUG00000006080	ptcd2	91	44.160	Ictalurus_punctatus
ENSUAMG00000007583	PTCD2	89	78.010	ENSSTOG00000006596	PTCD2	99	78.010	Ictidomys_tridecemlineatus
ENSUAMG00000007583	PTCD2	90	74.674	ENSJJAG00000024388	Ptcd2	100	74.674	Jaculus_jaculus
ENSUAMG00000007583	PTCD2	87	42.204	ENSKMAG00000009329	ptcd2	96	42.204	Kryptolebias_marmoratus
ENSUAMG00000007583	PTCD2	81	46.686	ENSLBEG00000024871	ptcd2	88	46.686	Labrus_bergylta
ENSUAMG00000007583	PTCD2	86	53.261	ENSLOCG00000011122	ptcd2	95	53.261	Lepisosteus_oculatus
ENSUAMG00000007583	PTCD2	73	79.743	ENSLAFG00000004115	PTCD2	100	79.743	Loxodonta_africana
ENSUAMG00000007583	PTCD2	91	76.031	ENSMFAG00000031516	PTCD2	100	76.031	Macaca_fascicularis
ENSUAMG00000007583	PTCD2	90	76.501	ENSMNEG00000007537	PTCD2	100	76.501	Macaca_nemestrina
ENSUAMG00000007583	PTCD2	91	76.031	ENSMLEG00000031093	PTCD2	100	76.031	Mandrillus_leucophaeus
ENSUAMG00000007583	PTCD2	81	46.839	ENSMAMG00000018529	ptcd2	91	46.839	Mastacembelus_armatus
ENSUAMG00000007583	PTCD2	81	45.845	ENSMZEG00005003625	ptcd2	89	45.845	Maylandia_zebra
ENSUAMG00000007583	PTCD2	81	50.000	ENSMGAG00000005033	PTCD2	100	50.000	Meleagris_gallopavo
ENSUAMG00000007583	PTCD2	87	58.491	ENSMAUG00000020253	Ptcd2	97	58.491	Mesocricetus_auratus
ENSUAMG00000007583	PTCD2	91	78.295	ENSMICG00000004535	PTCD2	99	78.295	Microcebus_murinus
ENSUAMG00000007583	PTCD2	87	73.854	ENSMOCG00000019985	Ptcd2	97	73.854	Microtus_ochrogaster
ENSUAMG00000007583	PTCD2	90	56.995	ENSMODG00000001695	PTCD2	100	56.995	Monodelphis_domestica
ENSUAMG00000007583	PTCD2	81	47.126	ENSMALG00000022372	ptcd2	91	47.126	Monopterus_albus
ENSUAMG00000007583	PTCD2	87	72.237	MGP_CAROLIEiJ_G0018829	Ptcd2	97	72.237	Mus_caroli
ENSUAMG00000007583	PTCD2	87	70.889	ENSMUSG00000021650	Ptcd2	97	70.889	Mus_musculus
ENSUAMG00000007583	PTCD2	87	74.394	MGP_PahariEiJ_G0015904	Ptcd2	97	74.394	Mus_pahari
ENSUAMG00000007583	PTCD2	87	71.698	MGP_SPRETEiJ_G0019711	Ptcd2	97	71.698	Mus_spretus
ENSUAMG00000007583	PTCD2	90	94.778	ENSMPUG00000014401	PTCD2	100	94.778	Mustela_putorius_furo
ENSUAMG00000007583	PTCD2	91	78.553	ENSMLUG00000007374	PTCD2	99	78.553	Myotis_lucifugus
ENSUAMG00000007583	PTCD2	90	72.585	ENSNGAG00000005027	Ptcd2	100	72.585	Nannospalax_galili
ENSUAMG00000007583	PTCD2	77	45.619	ENSNBRG00000000092	-	100	45.619	Neolamprologus_brichardi
ENSUAMG00000007583	PTCD2	81	46.132	ENSNBRG00000008174	ptcd2	91	46.132	Neolamprologus_brichardi
ENSUAMG00000007583	PTCD2	90	77.662	ENSNLEG00000004516	PTCD2	99	77.662	Nomascus_leucogenys
ENSUAMG00000007583	PTCD2	70	54.000	ENSMEUG00000014012	-	82	53.355	Notamacropus_eugenii
ENSUAMG00000007583	PTCD2	91	71.576	ENSOPRG00000007290	PTCD2	99	71.576	Ochotona_princeps
ENSUAMG00000007583	PTCD2	87	74.324	ENSODEG00000016417	PTCD2	97	74.324	Octodon_degus
ENSUAMG00000007583	PTCD2	77	44.713	ENSONIG00000011269	ptcd2	96	44.713	Oreochromis_niloticus
ENSUAMG00000007583	PTCD2	85	78.082	ENSOCUG00000007970	PTCD2	100	76.501	Oryctolagus_cuniculus
ENSUAMG00000007583	PTCD2	81	44.798	ENSORLG00000003851	ptcd2	88	44.798	Oryzias_latipes
ENSUAMG00000007583	PTCD2	81	44.220	ENSORLG00020009823	ptcd2	90	44.220	Oryzias_latipes_hni
ENSUAMG00000007583	PTCD2	82	44.286	ENSORLG00015016777	ptcd2	99	44.286	Oryzias_latipes_hsok
ENSUAMG00000007583	PTCD2	81	43.353	ENSOMEG00000012396	ptcd2	84	43.353	Oryzias_melastigma
ENSUAMG00000007583	PTCD2	90	75.065	ENSOGAG00000008390	PTCD2	99	75.065	Otolemur_garnettii
ENSUAMG00000007583	PTCD2	91	80.928	ENSOARG00000005087	PTCD2	99	80.928	Ovis_aries
ENSUAMG00000007583	PTCD2	90	78.182	ENSPPAG00000028480	PTCD2	99	78.182	Pan_paniscus
ENSUAMG00000007583	PTCD2	90	78.182	ENSPTRG00000016968	PTCD2	99	78.182	Pan_troglodytes
ENSUAMG00000007583	PTCD2	81	78.841	ENSPANG00000006611	PTCD2	89	78.841	Papio_anubis
ENSUAMG00000007583	PTCD2	83	48.023	ENSPKIG00000019896	ptcd2	92	48.023	Paramormyrops_kingsleyae
ENSUAMG00000007583	PTCD2	72	61.165	ENSPSIG00000014559	PTCD2	96	61.165	Pelodiscus_sinensis
ENSUAMG00000007583	PTCD2	87	72.118	ENSPEMG00000000884	Ptcd2	97	72.118	Peromyscus_maniculatus_bairdii
ENSUAMG00000007583	PTCD2	90	59.635	ENSPCIG00000029047	PTCD2	100	59.635	Phascolarctos_cinereus
ENSUAMG00000007583	PTCD2	76	44.954	ENSPLAG00000010456	ptcd2	91	44.699	Poecilia_latipinna
ENSUAMG00000007583	PTCD2	81	43.678	ENSPREG00000021797	ptcd2	88	43.678	Poecilia_reticulata
ENSUAMG00000007583	PTCD2	90	69.091	ENSPPYG00000015543	PTCD2	99	69.091	Pongo_abelii
ENSUAMG00000007583	PTCD2	73	66.238	ENSPCAG00000006806	PTCD2	99	66.238	Procavia_capensis
ENSUAMG00000007583	PTCD2	91	79.328	ENSPVAG00000010935	PTCD2	99	79.328	Pteropus_vampyrus
ENSUAMG00000007583	PTCD2	81	45.845	ENSPNYG00000003122	ptcd2	89	45.845	Pundamilia_nyererei
ENSUAMG00000007583	PTCD2	85	48.370	ENSPNAG00000021490	ptcd2	95	48.641	Pygocentrus_nattereri
ENSUAMG00000007583	PTCD2	90	73.107	ENSRNOG00000028403	Ptcd2	100	73.107	Rattus_norvegicus
ENSUAMG00000007583	PTCD2	91	72.165	ENSRBIG00000032929	PTCD2	100	72.165	Rhinopithecus_bieti
ENSUAMG00000007583	PTCD2	90	78.329	ENSRROG00000000080	PTCD2	100	78.329	Rhinopithecus_roxellana
ENSUAMG00000007583	PTCD2	90	78.068	ENSSBOG00000018911	PTCD2	100	78.068	Saimiri_boliviensis_boliviensis
ENSUAMG00000007583	PTCD2	90	58.961	ENSSHAG00000003833	PTCD2	99	58.854	Sarcophilus_harrisii
ENSUAMG00000007583	PTCD2	81	46.377	ENSSFOG00015015415	ptcd2	89	46.377	Scleropages_formosus
ENSUAMG00000007583	PTCD2	81	44.669	ENSSMAG00000010350	ptcd2	90	44.669	Scophthalmus_maximus
ENSUAMG00000007583	PTCD2	81	47.262	ENSSDUG00000008142	ptcd2	87	47.262	Seriola_dumerili
ENSUAMG00000007583	PTCD2	81	47.550	ENSSLDG00000015284	ptcd2	91	47.550	Seriola_lalandi_dorsalis
ENSUAMG00000007583	PTCD2	73	69.329	ENSSARG00000004983	PTCD2	100	69.329	Sorex_araneus
ENSUAMG00000007583	PTCD2	90	51.175	ENSSPUG00000000176	PTCD2	96	51.175	Sphenodon_punctatus
ENSUAMG00000007583	PTCD2	81	46.264	ENSSPAG00000008591	ptcd2	89	46.264	Stegastes_partitus
ENSUAMG00000007583	PTCD2	100	77.049	ENSSSCG00000016975	PTCD2	100	77.049	Sus_scrofa
ENSUAMG00000007583	PTCD2	81	50.581	ENSTGUG00000005705	PTCD2	99	50.581	Taeniopygia_guttata
ENSUAMG00000007583	PTCD2	91	75.515	ENSTBEG00000016559	PTCD2	100	75.515	Tupaia_belangeri
ENSUAMG00000007583	PTCD2	91	80.977	ENSTTRG00000011851	PTCD2	100	80.977	Tursiops_truncatus
ENSUAMG00000007583	PTCD2	90	99.739	ENSUMAG00000007666	PTCD2	100	99.739	Ursus_maritimus
ENSUAMG00000007583	PTCD2	91	80.928	ENSVPAG00000009597	PTCD2	99	80.928	Vicugna_pacos
ENSUAMG00000007583	PTCD2	90	86.423	ENSVVUG00000007299	-	100	86.423	Vulpes_vulpes
ENSUAMG00000007583	PTCD2	84	51.667	ENSXETG00000031652	PTCD2	94	51.667	Xenopus_tropicalis
ENSUAMG00000007583	PTCD2	76	44.954	ENSXMAG00000005940	ptcd2	82	44.413	Xiphophorus_maculatus