EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000008049 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 23537 bases
Position: chrLZNR01003057.1:194976-218512
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000009704	PPR	PF01535.20	2.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000010925	-	3553	-	ENSUAMP00000009704	704 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000008049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000008049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000008049	-	100	76.761	ENSG00000248919	ATP5MF-PTCD1	93	76.901	Homo_sapiens
ENSUAMG00000008049	-	100	76.761	ENSG00000106246	PTCD1	100	76.901	Homo_sapiens
ENSUAMG00000008049	-	79	47.443	ENSAPOG00000010679	ptcd1	85	47.090	Acanthochromis_polyacanthus
ENSUAMG00000008049	-	100	97.443	ENSAMEG00000006224	-	93	97.443	Ailuropoda_melanoleuca
ENSUAMG00000008049	-	83	50.764	ENSACIG00000017861	ptcd1	84	50.424	Amphilophus_citrinellus
ENSUAMG00000008049	-	86	46.179	ENSAOCG00000022617	ptcd1	84	47.314	Amphiprion_ocellaris
ENSUAMG00000008049	-	90	46.967	ENSAOCG00000020741	-	83	48.099	Amphiprion_ocellaris
ENSUAMG00000008049	-	89	47.077	ENSAPEG00000022632	ptcd1	88	46.501	Amphiprion_percula
ENSUAMG00000008049	-	84	50.934	ENSATEG00000007016	ptcd1	81	51.186	Anabas_testudineus
ENSUAMG00000008049	-	87	60.261	ENSAPLG00000006862	-	96	59.839	Anas_platyrhynchos
ENSUAMG00000008049	-	99	55.493	ENSACAG00000012871	-	92	54.789	Anolis_carolinensis
ENSUAMG00000008049	-	97	77.345	ENSANAG00000035790	-	99	77.489	Aotus_nancymaae
ENSUAMG00000008049	-	86	48.849	ENSACLG00000002824	ptcd1	83	49.013	Astatotilapia_calliptera
ENSUAMG00000008049	-	86	49.289	ENSAMXG00000037292	ptcd1	94	47.415	Astyanax_mexicanus
ENSUAMG00000008049	-	100	81.303	ENSBTAG00000020440	-	87	81.303	Bos_taurus
ENSUAMG00000008049	-	100	76.793	ENSCJAG00000015815	-	100	76.934	Callithrix_jacchus
ENSUAMG00000008049	-	100	89.347	ENSCAFG00000015055	-	93	89.347	Canis_familiaris
ENSUAMG00000008049	-	100	89.347	ENSCAFG00020014480	-	93	89.347	Canis_lupus_dingo
ENSUAMG00000008049	-	100	81.303	ENSCHIG00000027000	-	99	81.303	Capra_hircus
ENSUAMG00000008049	-	100	80.878	ENSTSYG00000029495	-	100	80.878	Carlito_syrichta
ENSUAMG00000008049	-	93	78.571	ENSCAPG00000014660	-	100	78.571	Cavia_aperea
ENSUAMG00000008049	-	100	78.187	ENSCPOG00000001780	-	100	78.187	Cavia_porcellus
ENSUAMG00000008049	-	100	75.000	ENSCCAG00000034025	-	100	75.983	Cebus_capucinus
ENSUAMG00000008049	-	99	76.869	ENSCATG00000040859	-	99	77.151	Cercocebus_atys
ENSUAMG00000008049	-	98	79.221	ENSCLAG00000006354	-	100	79.208	Chinchilla_lanigera
ENSUAMG00000008049	-	91	76.498	ENSCSAG00000017794	-	95	76.805	Chlorocebus_sabaeus
ENSUAMG00000008049	-	97	56.534	ENSCPBG00000020866	-	97	56.259	Chrysemys_picta_bellii
ENSUAMG00000008049	-	99	76.096	ENSCANG00000023441	-	99	76.379	Colobus_angolensis_palliatus
ENSUAMG00000008049	-	100	76.521	ENSCGRG00001023686	Ptcd1	100	76.521	Cricetulus_griseus_chok1gshd
ENSUAMG00000008049	-	99	76.521	ENSCGRG00000015031	Ptcd1	99	76.521	Cricetulus_griseus_crigri
ENSUAMG00000008049	-	86	46.569	ENSCSEG00000002378	ptcd1	83	46.569	Cynoglossus_semilaevis
ENSUAMG00000008049	-	83	47.906	ENSCVAG00000015826	ptcd1	81	48.241	Cyprinodon_variegatus
ENSUAMG00000008049	-	85	47.377	ENSCVAG00000003621	ptcd1	89	47.126	Cyprinodon_variegatus
ENSUAMG00000008049	-	89	49.685	ENSDARG00000076176	ptcd1	90	49.054	Danio_rerio
ENSUAMG00000008049	-	100	78.984	ENSDNOG00000009957	-	100	80.000	Dasypus_novemcinctus
ENSUAMG00000008049	-	98	76.734	ENSDORG00000000740	Ptcd1	99	77.168	Dipodomys_ordii
ENSUAMG00000008049	-	84	41.033	ENSEBUG00000014515	ptcd1	73	59.794	Eptatretus_burgeri
ENSUAMG00000008049	-	100	84.789	ENSEASG00005002480	-	100	85.775	Equus_asinus_asinus
ENSUAMG00000008049	-	100	85.070	ENSECAG00000016617	-	100	86.056	Equus_caballus
ENSUAMG00000008049	-	84	48.148	ENSELUG00000016517	ptcd1	82	48.148	Esox_lucius
ENSUAMG00000008049	-	100	89.504	ENSFCAG00000015069	-	100	89.504	Felis_catus
ENSUAMG00000008049	-	96	55.430	ENSFALG00000013803	-	94	56.466	Ficedula_albicollis
ENSUAMG00000008049	-	100	77.872	ENSFDAG00000006393	-	100	77.872	Fukomys_damarensis
ENSUAMG00000008049	-	75	48.507	ENSFHEG00000012491	ptcd1	88	48.224	Fundulus_heteroclitus
ENSUAMG00000008049	-	86	47.030	ENSGMOG00000007639	ptcd1	95	46.535	Gadus_morhua
ENSUAMG00000008049	-	87	58.034	ENSGALG00000004711	-	90	57.580	Gallus_gallus
ENSUAMG00000008049	-	84	48.833	ENSGAFG00000013175	ptcd1	83	48.752	Gambusia_affinis
ENSUAMG00000008049	-	85	49.500	ENSGACG00000016607	ptcd1	91	49.167	Gasterosteus_aculeatus
ENSUAMG00000008049	-	82	61.263	ENSGAGG00000021832	-	87	60.751	Gopherus_agassizii
ENSUAMG00000008049	-	99	76.587	ENSGGOG00000015123	-	99	76.728	Gorilla_gorilla
ENSUAMG00000008049	-	86	48.684	ENSHBUG00000018275	ptcd1	83	48.849	Haplochromis_burtoni
ENSUAMG00000008049	-	100	78.187	ENSHGLG00000017621	-	100	78.187	Heterocephalus_glaber_female
ENSUAMG00000008049	-	100	78.187	ENSHGLG00100007218	-	100	78.187	Heterocephalus_glaber_male
ENSUAMG00000008049	-	83	47.530	ENSHCOG00000010784	ptcd1	82	47.449	Hippocampus_comes
ENSUAMG00000008049	-	100	79.267	ENSSTOG00000001682	-	100	79.267	Ictidomys_tridecemlineatus
ENSUAMG00000008049	-	100	75.177	ENSJJAG00000000319	Ptcd1	100	75.177	Jaculus_jaculus
ENSUAMG00000008049	-	84	48.322	ENSKMAG00000008708	ptcd1	82	48.490	Kryptolebias_marmoratus
ENSUAMG00000008049	-	83	47.492	ENSLBEG00000008061	ptcd1	80	47.769	Labrus_bergylta
ENSUAMG00000008049	-	88	56.220	ENSLACG00000011172	ptcd1	88	55.906	Latimeria_chalumnae
ENSUAMG00000008049	-	91	52.226	ENSLOCG00000004833	ptcd1	97	52.632	Lepisosteus_oculatus
ENSUAMG00000008049	-	100	73.944	ENSLAFG00000002588	-	100	73.944	Loxodonta_africana
ENSUAMG00000008049	-	99	76.587	ENSMFAG00000041324	-	99	76.869	Macaca_fascicularis
ENSUAMG00000008049	-	99	76.446	ENSMMUG00000030408	-	99	76.728	Macaca_mulatta
ENSUAMG00000008049	-	99	76.587	ENSMNEG00000043786	-	99	76.869	Macaca_nemestrina
ENSUAMG00000008049	-	99	59.379	ENSMLEG00000031179	-	99	60.704	Mandrillus_leucophaeus
ENSUAMG00000008049	-	85	50.083	ENSMAMG00000007623	ptcd1	82	49.917	Mastacembelus_armatus
ENSUAMG00000008049	-	86	48.849	ENSMZEG00005012722	ptcd1	83	49.013	Maylandia_zebra
ENSUAMG00000008049	-	93	56.406	ENSMGAG00000004211	-	87	56.342	Meleagris_gallopavo
ENSUAMG00000008049	-	100	79.037	ENSMICG00000017428	-	100	79.745	Microcebus_murinus
ENSUAMG00000008049	-	86	46.290	ENSMMOG00000020243	ptcd1	92	46.290	Mola_mola
ENSUAMG00000008049	-	99	59.456	ENSMODG00000001350	-	99	59.184	Monodelphis_domestica
ENSUAMG00000008049	-	85	49.507	ENSMALG00000018442	ptcd1	82	49.507	Monopterus_albus
ENSUAMG00000008049	-	99	77.809	MGP_CAROLIEiJ_G0028011	Ptcd1	99	77.952	Mus_caroli
ENSUAMG00000008049	-	99	77.809	ENSMUSG00000029624	Ptcd1	99	77.952	Mus_musculus
ENSUAMG00000008049	-	100	77.589	MGP_PahariEiJ_G0024580	Ptcd1	100	77.730	Mus_pahari
ENSUAMG00000008049	-	99	77.809	MGP_SPRETEiJ_G0029012	Ptcd1	99	78.094	Mus_spretus
ENSUAMG00000008049	-	100	90.483	ENSMPUG00000016518	-	100	90.483	Mustela_putorius_furo
ENSUAMG00000008049	-	100	85.614	ENSMLUG00000010994	-	94	85.614	Myotis_lucifugus
ENSUAMG00000008049	-	86	48.544	ENSNBRG00000010079	ptcd1	85	48.940	Neolamprologus_brichardi
ENSUAMG00000008049	-	99	77.448	ENSNLEG00000011060	-	99	77.448	Nomascus_leucogenys
ENSUAMG00000008049	-	98	60.142	ENSMEUG00000006930	-	99	59.574	Notamacropus_eugenii
ENSUAMG00000008049	-	89	78.353	ENSOPRG00000013647	-	89	78.118	Ochotona_princeps
ENSUAMG00000008049	-	83	48.639	ENSONIG00000003168	ptcd1	95	48.480	Oreochromis_niloticus
ENSUAMG00000008049	-	81	57.217	ENSOANG00000007728	-	75	57.217	Ornithorhynchus_anatinus
ENSUAMG00000008049	-	99	77.589	ENSOCUG00000010584	-	97	77.589	Oryctolagus_cuniculus
ENSUAMG00000008049	-	88	47.276	ENSORLG00000009275	ptcd1	88	47.276	Oryzias_latipes
ENSUAMG00000008049	-	88	46.519	ENSORLG00020000988	ptcd1	88	46.519	Oryzias_latipes_hni
ENSUAMG00000008049	-	88	46.203	ENSORLG00015010557	ptcd1	88	46.203	Oryzias_latipes_hsok
ENSUAMG00000008049	-	85	48.671	ENSOMEG00000020627	ptcd1	87	48.350	Oryzias_melastigma
ENSUAMG00000008049	-	99	74.857	ENSOGAG00000010877	-	100	75.714	Otolemur_garnettii
ENSUAMG00000008049	-	100	76.379	ENSOARG00000018676	-	100	74.895	Ovis_aries
ENSUAMG00000008049	-	100	76.793	ENSPPAG00000036024	-	100	76.620	Pan_paniscus
ENSUAMG00000008049	-	100	89.220	ENSPPRG00000003478	-	100	89.220	Panthera_pardus
ENSUAMG00000008049	-	100	76.793	ENSPTRG00000019452	-	100	76.620	Pan_troglodytes
ENSUAMG00000008049	-	99	76.869	ENSPANG00000016730	-	99	77.151	Papio_anubis
ENSUAMG00000008049	-	94	50.221	ENSPKIG00000014215	ptcd1	93	50.751	Paramormyrops_kingsleyae
ENSUAMG00000008049	-	85	59.736	ENSPSIG00000011184	-	100	59.867	Pelodiscus_sinensis
ENSUAMG00000008049	-	73	42.176	ENSPMAG00000009667	ptcd1	100	41.603	Petromyzon_marinus
ENSUAMG00000008049	-	88	65.719	ENSPCIG00000024778	-	92	62.610	Phascolarctos_cinereus
ENSUAMG00000008049	-	84	48.167	ENSPFOG00000004458	ptcd1	82	47.833	Poecilia_formosa
ENSUAMG00000008049	-	84	48.485	ENSPLAG00000011051	ptcd1	82	48.653	Poecilia_latipinna
ENSUAMG00000008049	-	84	48.167	ENSPMEG00000020547	ptcd1	82	47.833	Poecilia_mexicana
ENSUAMG00000008049	-	83	48.900	ENSPREG00000000059	ptcd1	83	48.154	Poecilia_reticulata
ENSUAMG00000008049	-	93	78.473	ENSPPYG00000017377	-	99	78.473	Pongo_abelii
ENSUAMG00000008049	-	81	80.986	ENSPCAG00000001852	-	89	80.986	Procavia_capensis
ENSUAMG00000008049	-	100	79.037	ENSPCOG00000018596	-	100	79.745	Propithecus_coquereli
ENSUAMG00000008049	-	67	90.000	ENSPVAG00000007529	-	70	90.000	Pteropus_vampyrus
ENSUAMG00000008049	-	86	48.933	ENSPNYG00000019993	ptcd1	83	48.849	Pundamilia_nyererei
ENSUAMG00000008049	-	92	50.456	ENSPNAG00000014931	ptcd1	95	49.560	Pygocentrus_nattereri
ENSUAMG00000008049	-	99	77.809	ENSRNOG00000000987	Ptcd1	99	77.952	Rattus_norvegicus
ENSUAMG00000008049	-	99	76.379	ENSRBIG00000043393	-	99	76.662	Rhinopithecus_bieti
ENSUAMG00000008049	-	99	76.238	ENSRROG00000036420	-	99	76.521	Rhinopithecus_roxellana
ENSUAMG00000008049	-	100	77.183	ENSSBOG00000024114	-	100	77.324	Saimiri_boliviensis_boliviensis
ENSUAMG00000008049	-	97	56.581	ENSSHAG00000011376	-	97	62.637	Sarcophilus_harrisii
ENSUAMG00000008049	-	87	53.375	ENSSFOG00015007909	ptcd1	84	53.292	Scleropages_formosus
ENSUAMG00000008049	-	87	46.743	ENSSMAG00000000218	ptcd1	95	46.743	Scophthalmus_maximus
ENSUAMG00000008049	-	86	48.293	ENSSDUG00000015671	ptcd1	87	48.293	Seriola_dumerili
ENSUAMG00000008049	-	85	48.710	ENSSLDG00000014261	ptcd1	86	48.710	Seriola_lalandi_dorsalis
ENSUAMG00000008049	-	85	58.814	ENSSPUG00000003540	-	83	59.390	Sphenodon_punctatus
ENSUAMG00000008049	-	86	48.950	ENSSPAG00000011049	ptcd1	83	48.622	Stegastes_partitus
ENSUAMG00000008049	-	92	83.871	ENSSSCG00000007622	-	99	83.739	Sus_scrofa
ENSUAMG00000008049	-	87	59.740	ENSTGUG00000007563	-	99	60.065	Taeniopygia_guttata
ENSUAMG00000008049	-	85	47.412	ENSTRUG00000013471	ptcd1	81	47.078	Takifugu_rubripes
ENSUAMG00000008049	-	91	46.130	ENSTNIG00000008271	ptcd1	88	45.975	Tetraodon_nigroviridis
ENSUAMG00000008049	-	100	78.279	ENSTBEG00000011021	-	100	78.138	Tupaia_belangeri
ENSUAMG00000008049	-	100	79.887	ENSTTRG00000003006	-	100	79.887	Tursiops_truncatus
ENSUAMG00000008049	-	99	89.000	ENSVVUG00000008836	-	99	89.000	Vulpes_vulpes
ENSUAMG00000008049	-	88	52.809	ENSXETG00000009891	ptcd1	91	52.283	Xenopus_tropicalis
ENSUAMG00000008049	-	84	49.155	ENSXMAG00000015540	ptcd1	82	48.818	Xiphophorus_maculatus