EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000008126 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 202738 bases
Position: chrLZNR01003062.1:203243-405980
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000010692	S1	PF00575.23	6.8e-10	1	1
ENSUAMP00000010688	S1	PF00575.23	2.7e-09	1	1
ENSUAMP00000010673	S1	PF00575.23	2.7e-09	1	1
ENSUAMP00000010671	S1	PF00575.23	3e-09	1	1
ENSUAMP00000010689	S1	PF00575.23	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000012006	SRBD1-204	2934	-	ENSUAMP00000010688	977 (aa)	-	-
ENSUAMT00000012007	SRBD1-205	3024	-	ENSUAMP00000010689	1007 (aa)	-	-
ENSUAMT00000012010	SRBD1-206	861	-	ENSUAMP00000010692	286 (aa)	-	-
ENSUAMT00000011988	SRBD1-202	3021	-	ENSUAMP00000010671	1006 (aa)	-	-
ENSUAMT00000011985	SRBD1-201	2808	-	ENSUAMP00000010669	935 (aa)	-	-
ENSUAMT00000011990	SRBD1-203	2844	-	ENSUAMP00000010673	947 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000008126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000008126's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000008126	SRBD1	97	95.290	ENSG00000068784	SRBD1	100	90.462	Homo_sapiens
ENSUAMG00000008126	SRBD1	97	56.159	ENSAPOG00000005103	si:ch211-117n7.8	83	58.137	Acanthochromis_polyacanthus
ENSUAMG00000008126	SRBD1	100	96.226	ENSAMEG00000005993	SRBD1	100	97.978	Ailuropoda_melanoleuca
ENSUAMG00000008126	SRBD1	97	55.072	ENSACIG00000009875	si:ch211-117n7.8	85	58.235	Amphilophus_citrinellus
ENSUAMG00000008126	SRBD1	97	55.435	ENSAOCG00000024718	si:ch211-117n7.8	85	58.110	Amphiprion_ocellaris
ENSUAMG00000008126	SRBD1	97	56.679	ENSAPEG00000002645	si:ch211-117n7.8	88	58.226	Amphiprion_percula
ENSUAMG00000008126	SRBD1	97	56.115	ENSATEG00000010844	si:ch211-117n7.8	84	58.167	Anabas_testudineus
ENSUAMG00000008126	SRBD1	97	75.090	ENSAPLG00000006313	SRBD1	100	71.200	Anas_platyrhynchos
ENSUAMG00000008126	SRBD1	97	71.786	ENSACAG00000003811	-	100	74.528	Anolis_carolinensis
ENSUAMG00000008126	SRBD1	97	94.203	ENSANAG00000025573	SRBD1	100	90.462	Aotus_nancymaae
ENSUAMG00000008126	SRBD1	97	54.513	ENSACLG00000024219	si:ch211-117n7.8	94	52.766	Astatotilapia_calliptera
ENSUAMG00000008126	SRBD1	97	56.884	ENSAMXG00000004294	SRBD1	93	56.962	Astyanax_mexicanus
ENSUAMG00000008126	SRBD1	97	94.585	ENSBTAG00000007508	SRBD1	97	90.964	Bos_taurus
ENSUAMG00000008126	SRBD1	97	92.029	ENSCJAG00000000727	SRBD1	100	90.060	Callithrix_jacchus
ENSUAMG00000008126	SRBD1	100	94.147	ENSCAFG00000002554	SRBD1	100	95.859	Canis_familiaris
ENSUAMG00000008126	SRBD1	97	96.751	ENSCAFG00020026284	SRBD1	99	94.620	Canis_lupus_dingo
ENSUAMG00000008126	SRBD1	97	94.928	ENSCHIG00000016535	SRBD1	99	90.900	Capra_hircus
ENSUAMG00000008126	SRBD1	100	90.059	ENSTSYG00000012797	SRBD1	100	91.683	Carlito_syrichta
ENSUAMG00000008126	SRBD1	97	88.768	ENSCAPG00000014166	-	100	90.683	Cavia_aperea
ENSUAMG00000008126	SRBD1	100	88.526	ENSCPOG00000004773	SRBD1	100	90.131	Cavia_porcellus
ENSUAMG00000008126	SRBD1	97	93.841	ENSCCAG00000025589	SRBD1	100	91.165	Cebus_capucinus
ENSUAMG00000008126	SRBD1	97	95.652	ENSCATG00000039530	SRBD1	100	91.265	Cercocebus_atys
ENSUAMG00000008126	SRBD1	97	93.478	ENSCLAG00000008623	SRBD1	100	90.863	Chinchilla_lanigera
ENSUAMG00000008126	SRBD1	97	95.652	ENSCSAG00000013350	SRBD1	100	91.466	Chlorocebus_sabaeus
ENSUAMG00000008126	SRBD1	88	94.904	ENSCHOG00000003805	SRBD1	87	94.904	Choloepus_hoffmanni
ENSUAMG00000008126	SRBD1	97	79.422	ENSCPBG00000005677	SRBD1	100	74.168	Chrysemys_picta_bellii
ENSUAMG00000008126	SRBD1	96	38.909	ENSCING00000005950	-	99	42.875	Ciona_intestinalis
ENSUAMG00000008126	SRBD1	96	36.000	ENSCSAVG00000000861	-	99	42.893	Ciona_savignyi
ENSUAMG00000008126	SRBD1	97	94.565	ENSCANG00000016307	SRBD1	99	91.046	Colobus_angolensis_palliatus
ENSUAMG00000008126	SRBD1	100	84.252	ENSCGRG00001000513	Srbd1	100	85.772	Cricetulus_griseus_chok1gshd
ENSUAMG00000008126	SRBD1	100	84.252	ENSCGRG00000002283	Srbd1	100	85.772	Cricetulus_griseus_crigri
ENSUAMG00000008126	SRBD1	97	53.763	ENSCSEG00000000856	si:ch211-117n7.8	86	56.437	Cynoglossus_semilaevis
ENSUAMG00000008126	SRBD1	97	56.159	ENSCVAG00000020212	si:ch211-117n7.8	97	54.644	Cyprinodon_variegatus
ENSUAMG00000008126	SRBD1	56	56.875	ENSDARG00000079827	srbd1	99	57.325	Danio_rerio
ENSUAMG00000008126	SRBD1	97	94.224	ENSDNOG00000018686	SRBD1	100	91.592	Dasypus_novemcinctus
ENSUAMG00000008126	SRBD1	100	85.996	ENSDORG00000010468	Srbd1	100	87.550	Dipodomys_ordii
ENSUAMG00000008126	SRBD1	97	32.374	FBgn0051156	CG31156	98	34.975	Drosophila_melanogaster
ENSUAMG00000008126	SRBD1	97	81.522	ENSETEG00000000739	SRBD1	91	83.422	Echinops_telfairi
ENSUAMG00000008126	SRBD1	97	42.754	ENSEBUG00000008902	si:ch211-117n7.8	96	48.098	Eptatretus_burgeri
ENSUAMG00000008126	SRBD1	97	95.652	ENSEASG00005003132	SRBD1	97	95.541	Equus_asinus_asinus
ENSUAMG00000008126	SRBD1	97	96.029	ENSECAG00000013865	SRBD1	98	93.976	Equus_caballus
ENSUAMG00000008126	SRBD1	97	57.040	ENSELUG00000012592	si:ch211-117n7.8	91	55.169	Esox_lucius
ENSUAMG00000008126	SRBD1	97	98.195	ENSFCAG00000005101	SRBD1	100	95.884	Felis_catus
ENSUAMG00000008126	SRBD1	97	71.739	ENSFALG00000012966	SRBD1	100	69.021	Ficedula_albicollis
ENSUAMG00000008126	SRBD1	98	86.996	ENSFDAG00000016670	SRBD1	98	88.889	Fukomys_damarensis
ENSUAMG00000008126	SRBD1	97	55.435	ENSFHEG00000019480	si:ch211-117n7.8	82	58.068	Fundulus_heteroclitus
ENSUAMG00000008126	SRBD1	97	50.725	ENSGMOG00000018010	-	100	51.910	Gadus_morhua
ENSUAMG00000008126	SRBD1	97	74.638	ENSGALG00000009990	SRBD1	100	70.800	Gallus_gallus
ENSUAMG00000008126	SRBD1	97	53.261	ENSGAFG00000019664	si:ch211-117n7.8	97	52.073	Gambusia_affinis
ENSUAMG00000008126	SRBD1	97	53.597	ENSGACG00000010794	si:ch211-117n7.8	97	65.097	Gasterosteus_aculeatus
ENSUAMG00000008126	SRBD1	97	78.417	ENSGAGG00000006166	SRBD1	99	81.557	Gopherus_agassizii
ENSUAMG00000008126	SRBD1	97	96.014	ENSGGOG00000005910	SRBD1	99	90.541	Gorilla_gorilla
ENSUAMG00000008126	SRBD1	97	54.874	ENSHBUG00000013207	si:ch211-117n7.8	86	50.888	Haplochromis_burtoni
ENSUAMG00000008126	SRBD1	98	89.738	ENSHGLG00000018153	-	99	89.738	Heterocephalus_glaber_female
ENSUAMG00000008126	SRBD1	98	89.537	ENSHGLG00100015183	-	99	89.537	Heterocephalus_glaber_male
ENSUAMG00000008126	SRBD1	55	51.899	ENSHCOG00000020901	-	99	51.899	Hippocampus_comes
ENSUAMG00000008126	SRBD1	97	57.971	ENSIPUG00000009661	srbd1	97	55.736	Ictalurus_punctatus
ENSUAMG00000008126	SRBD1	100	89.842	ENSSTOG00000005898	SRBD1	100	91.466	Ictidomys_tridecemlineatus
ENSUAMG00000008126	SRBD1	97	85.145	ENSJJAG00000022244	Srbd1	100	80.862	Jaculus_jaculus
ENSUAMG00000008126	SRBD1	97	53.261	ENSKMAG00000003473	si:ch211-117n7.8	83	57.126	Kryptolebias_marmoratus
ENSUAMG00000008126	SRBD1	97	55.072	ENSLBEG00000027518	si:ch211-117n7.8	92	53.479	Labrus_bergylta
ENSUAMG00000008126	SRBD1	97	71.377	ENSLACG00000009790	SRBD1	100	71.311	Latimeria_chalumnae
ENSUAMG00000008126	SRBD1	97	62.319	ENSLOCG00000016360	si:ch211-117n7.8	99	57.719	Lepisosteus_oculatus
ENSUAMG00000008126	SRBD1	97	88.768	ENSLAFG00000004190	-	97	88.693	Loxodonta_africana
ENSUAMG00000008126	SRBD1	97	95.652	ENSMFAG00000042026	SRBD1	100	91.566	Macaca_fascicularis
ENSUAMG00000008126	SRBD1	97	95.652	ENSMMUG00000003490	SRBD1	100	91.265	Macaca_mulatta
ENSUAMG00000008126	SRBD1	97	95.652	ENSMNEG00000034701	SRBD1	100	88.855	Macaca_nemestrina
ENSUAMG00000008126	SRBD1	97	95.290	ENSMLEG00000000745	SRBD1	100	91.165	Mandrillus_leucophaeus
ENSUAMG00000008126	SRBD1	96	55.072	ENSMAMG00000021921	si:ch211-117n7.8	84	56.486	Mastacembelus_armatus
ENSUAMG00000008126	SRBD1	97	54.513	ENSMZEG00005027369	si:ch211-117n7.8	94	52.766	Maylandia_zebra
ENSUAMG00000008126	SRBD1	97	74.368	ENSMGAG00000010273	SRBD1	100	75.970	Meleagris_gallopavo
ENSUAMG00000008126	SRBD1	97	84.783	ENSMAUG00000013916	Srbd1	99	85.884	Mesocricetus_auratus
ENSUAMG00000008126	SRBD1	97	94.946	ENSMICG00000007835	SRBD1	100	92.771	Microcebus_murinus
ENSUAMG00000008126	SRBD1	100	83.054	ENSMOCG00000018716	Srbd1	100	83.835	Microtus_ochrogaster
ENSUAMG00000008126	SRBD1	97	54.348	ENSMMOG00000007507	si:ch211-117n7.8	92	54.505	Mola_mola
ENSUAMG00000008126	SRBD1	97	53.623	ENSMALG00000001562	si:ch211-117n7.8	88	52.550	Monopterus_albus
ENSUAMG00000008126	SRBD1	100	80.671	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.026	Mus_caroli
ENSUAMG00000008126	SRBD1	100	80.572	ENSMUSG00000024135	Srbd1	100	82.028	Mus_musculus
ENSUAMG00000008126	SRBD1	100	79.586	MGP_PahariEiJ_G0020924	Srbd1	100	81.024	Mus_pahari
ENSUAMG00000008126	SRBD1	100	80.769	MGP_SPRETEiJ_G0022850	Srbd1	100	82.229	Mus_spretus
ENSUAMG00000008126	SRBD1	100	87.574	ENSMLUG00000007039	SRBD1	100	89.157	Myotis_lucifugus
ENSUAMG00000008126	SRBD1	100	84.653	ENSNGAG00000011893	Srbd1	100	84.262	Nannospalax_galili
ENSUAMG00000008126	SRBD1	97	53.791	ENSNBRG00000012873	si:ch211-117n7.8	85	56.480	Neolamprologus_brichardi
ENSUAMG00000008126	SRBD1	97	95.290	ENSNLEG00000016877	SRBD1	100	90.562	Nomascus_leucogenys
ENSUAMG00000008126	SRBD1	100	85.406	ENSODEG00000012095	SRBD1	100	86.606	Octodon_degus
ENSUAMG00000008126	SRBD1	97	54.513	ENSONIG00000000945	si:ch211-117n7.8	99	58.343	Oreochromis_niloticus
ENSUAMG00000008126	SRBD1	100	90.918	ENSOCUG00000015385	SRBD1	100	92.563	Oryctolagus_cuniculus
ENSUAMG00000008126	SRBD1	97	46.014	ENSORLG00000004427	si:ch211-117n7.8	81	54.706	Oryzias_latipes
ENSUAMG00000008126	SRBD1	97	55.072	ENSORLG00020012792	si:ch211-117n7.8	82	57.462	Oryzias_latipes_hni
ENSUAMG00000008126	SRBD1	97	55.072	ENSORLG00015018598	si:ch211-117n7.8	85	56.059	Oryzias_latipes_hsok
ENSUAMG00000008126	SRBD1	97	53.623	ENSOMEG00000012229	si:ch211-117n7.8	91	53.791	Oryzias_melastigma
ENSUAMG00000008126	SRBD1	97	89.170	ENSOGAG00000001076	SRBD1	100	85.442	Otolemur_garnettii
ENSUAMG00000008126	SRBD1	97	94.224	ENSOARG00000005958	SRBD1	100	87.682	Ovis_aries
ENSUAMG00000008126	SRBD1	97	95.290	ENSPPAG00000038442	SRBD1	100	90.562	Pan_paniscus
ENSUAMG00000008126	SRBD1	97	99.275	ENSPPRG00000003449	SRBD1	100	95.783	Panthera_pardus
ENSUAMG00000008126	SRBD1	97	99.275	ENSPTIG00000012495	SRBD1	100	95.783	Panthera_tigris_altaica
ENSUAMG00000008126	SRBD1	97	95.290	ENSPTRG00000011889	SRBD1	100	90.562	Pan_troglodytes
ENSUAMG00000008126	SRBD1	97	94.928	ENSPANG00000008063	SRBD1	100	91.165	Papio_anubis
ENSUAMG00000008126	SRBD1	97	55.435	ENSPKIG00000021973	si:ch211-117n7.8	89	58.830	Paramormyrops_kingsleyae
ENSUAMG00000008126	SRBD1	97	77.536	ENSPSIG00000008992	SRBD1	100	74.074	Pelodiscus_sinensis
ENSUAMG00000008126	SRBD1	97	53.986	ENSPMGG00000013348	si:ch211-117n7.8	86	56.501	Periophthalmus_magnuspinnatus
ENSUAMG00000008126	SRBD1	100	83.922	ENSPEMG00000020684	Srbd1	100	83.922	Peromyscus_maniculatus_bairdii
ENSUAMG00000008126	SRBD1	97	55.072	ENSPFOG00000010650	si:ch211-117n7.8	83	57.715	Poecilia_formosa
ENSUAMG00000008126	SRBD1	97	53.986	ENSPLAG00000002141	si:ch211-117n7.8	83	57.715	Poecilia_latipinna
ENSUAMG00000008126	SRBD1	97	55.435	ENSPMEG00000018537	si:ch211-117n7.8	83	57.833	Poecilia_mexicana
ENSUAMG00000008126	SRBD1	97	55.072	ENSPREG00000003258	si:ch211-117n7.8	91	55.298	Poecilia_reticulata
ENSUAMG00000008126	SRBD1	97	94.928	ENSPPYG00000012444	SRBD1	95	87.395	Pongo_abelii
ENSUAMG00000008126	SRBD1	88	83.665	ENSPCAG00000005629	SRBD1	85	82.649	Procavia_capensis
ENSUAMG00000008126	SRBD1	97	94.203	ENSPCOG00000017669	SRBD1	100	80.000	Propithecus_coquereli
ENSUAMG00000008126	SRBD1	97	93.116	ENSPVAG00000001782	SRBD1	100	82.430	Pteropus_vampyrus
ENSUAMG00000008126	SRBD1	97	54.513	ENSPNYG00000000508	si:ch211-117n7.8	86	54.417	Pundamilia_nyererei
ENSUAMG00000008126	SRBD1	97	57.609	ENSPNAG00000013492	SRBD1	95	56.906	Pygocentrus_nattereri
ENSUAMG00000008126	SRBD1	100	79.586	ENSRNOG00000014720	Srbd1	99	81.727	Rattus_norvegicus
ENSUAMG00000008126	SRBD1	97	94.565	ENSRBIG00000033486	SRBD1	99	90.845	Rhinopithecus_bieti
ENSUAMG00000008126	SRBD1	97	94.565	ENSRROG00000041599	SRBD1	99	90.845	Rhinopithecus_roxellana
ENSUAMG00000008126	SRBD1	97	94.203	ENSSBOG00000024982	SRBD1	100	90.361	Saimiri_boliviensis_boliviensis
ENSUAMG00000008126	SRBD1	97	54.710	ENSSFOG00015001128	si:ch211-117n7.8	90	59.953	Scleropages_formosus
ENSUAMG00000008126	SRBD1	97	54.676	ENSSMAG00000018256	si:ch211-117n7.8	94	52.815	Scophthalmus_maximus
ENSUAMG00000008126	SRBD1	97	54.676	ENSSLDG00000023189	si:ch211-117n7.8	85	56.686	Seriola_lalandi_dorsalis
ENSUAMG00000008126	SRBD1	97	85.145	ENSSARG00000009740	SRBD1	100	79.518	Sorex_araneus
ENSUAMG00000008126	SRBD1	97	73.188	ENSSPUG00000010475	SRBD1	99	76.063	Sphenodon_punctatus
ENSUAMG00000008126	SRBD1	65	57.838	ENSSPAG00000014206	-	98	55.779	Stegastes_partitus
ENSUAMG00000008126	SRBD1	97	54.348	ENSSPAG00000008092	-	84	55.948	Stegastes_partitus
ENSUAMG00000008126	SRBD1	97	96.390	ENSSSCG00000008445	SRBD1	99	92.700	Sus_scrofa
ENSUAMG00000008126	SRBD1	97	71.377	ENSTGUG00000003878	SRBD1	100	77.617	Taeniopygia_guttata
ENSUAMG00000008126	SRBD1	97	53.986	ENSTRUG00000007080	si:ch211-117n7.8	93	57.344	Takifugu_rubripes
ENSUAMG00000008126	SRBD1	97	54.710	ENSTNIG00000007464	si:ch211-117n7.8	97	51.303	Tetraodon_nigroviridis
ENSUAMG00000008126	SRBD1	84	98.936	ENSTBEG00000004556	SRBD1	82	98.936	Tupaia_belangeri
ENSUAMG00000008126	SRBD1	98	94.470	ENSTTRG00000011871	SRBD1	94	94.470	Tursiops_truncatus
ENSUAMG00000008126	SRBD1	99	99.496	ENSUMAG00000012902	SRBD1	99	99.496	Ursus_maritimus
ENSUAMG00000008126	SRBD1	97	95.290	ENSVPAG00000006825	SRBD1	100	92.952	Vicugna_pacos
ENSUAMG00000008126	SRBD1	99	95.267	ENSVVUG00000005389	SRBD1	99	98.101	Vulpes_vulpes
ENSUAMG00000008126	SRBD1	98	66.192	ENSXETG00000002760	srbd1	100	53.513	Xenopus_tropicalis
ENSUAMG00000008126	SRBD1	97	54.710	ENSXMAG00000016861	si:ch211-117n7.8	83	57.008	Xiphophorus_maculatus