EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000008283 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 56075 bases
Position: chrLZNR01005993.1:9810-65884
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000010043	RNA_bind	PF08675.11	2.2e-27	1	1
ENSUAMP00000010048	RNA_bind	PF08675.11	2.8e-26	1	1
ENSUAMP00000010043	CAF1	PF04857.20	1.4e-53	1	1
ENSUAMP00000010048	CAF1	PF04857.20	1.3e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000011297	PARN-201	1380	-	ENSUAMP00000010043	459 (aa)	-	-
ENSUAMT00000011302	PARN-202	1299	-	ENSUAMP00000010048	432 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000008283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000008283's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000008283	PARN	90	84.404	ENSG00000140694	PARN	99	70.318	Homo_sapiens
ENSUAMG00000008283	PARN	90	85.355	ENSAMEG00000011208	PARN	68	85.355	Ailuropoda_melanoleuca
ENSUAMG00000008283	PARN	94	66.118	ENSACIG00000000619	parn	67	68.506	Amphilophus_citrinellus
ENSUAMG00000008283	PARN	94	67.506	ENSAOCG00000003465	parn	63	71.167	Amphiprion_ocellaris
ENSUAMG00000008283	PARN	94	67.277	ENSAPEG00000010661	parn	83	70.938	Amphiprion_percula
ENSUAMG00000008283	PARN	94	68.879	ENSATEG00000004661	parn	64	72.769	Anabas_testudineus
ENSUAMG00000008283	PARN	95	75.751	ENSAPLG00000013914	PARN	73	75.751	Anas_platyrhynchos
ENSUAMG00000008283	PARN	94	71.167	ENSACAG00000004973	PARN	69	73.171	Anolis_carolinensis
ENSUAMG00000008283	PARN	90	83.486	ENSANAG00000031516	PARN	68	83.486	Aotus_nancymaae
ENSUAMG00000008283	PARN	100	65.779	ENSACLG00000004742	parn	72	65.779	Astatotilapia_calliptera
ENSUAMG00000008283	PARN	95	66.524	ENSAMXG00000012390	parn	76	63.948	Astyanax_mexicanus
ENSUAMG00000008283	PARN	94	80.049	ENSBTAG00000018097	PARN	75	83.945	Bos_taurus
ENSUAMG00000008283	PARN	90	83.028	ENSCJAG00000015866	PARN	68	83.028	Callithrix_jacchus
ENSUAMG00000008283	PARN	90	84.633	ENSCAFG00000018795	PARN	68	84.633	Canis_familiaris
ENSUAMG00000008283	PARN	90	84.404	ENSCAFG00020024126	PARN	68	84.404	Canis_lupus_dingo
ENSUAMG00000008283	PARN	90	84.174	ENSCHIG00000018143	PARN	68	84.174	Capra_hircus
ENSUAMG00000008283	PARN	95	52.681	ENSCAPG00000007984	PARN	68	57.488	Cavia_aperea
ENSUAMG00000008283	PARN	90	80.963	ENSCPOG00000002263	PARN	68	80.963	Cavia_porcellus
ENSUAMG00000008283	PARN	90	83.716	ENSCCAG00000030367	PARN	68	83.716	Cebus_capucinus
ENSUAMG00000008283	PARN	97	78.298	ENSCATG00000041368	PARN	78	83.486	Cercocebus_atys
ENSUAMG00000008283	PARN	90	82.339	ENSCLAG00000015406	PARN	68	82.339	Chinchilla_lanigera
ENSUAMG00000008283	PARN	90	83.945	ENSCSAG00000008142	PARN	68	83.945	Chlorocebus_sabaeus
ENSUAMG00000008283	PARN	81	66.316	ENSCHOG00000007014	PARN	62	67.196	Choloepus_hoffmanni
ENSUAMG00000008283	PARN	94	76.606	ENSCPBG00000006609	PARN	78	78.444	Chrysemys_picta_bellii
ENSUAMG00000008283	PARN	94	38.987	ENSCING00000010142	-	88	39.355	Ciona_intestinalis
ENSUAMG00000008283	PARN	90	67.473	ENSCANG00000028849	-	67	67.473	Colobus_angolensis_palliatus
ENSUAMG00000008283	PARN	96	73.134	ENSCGRG00001012096	Parn	74	73.134	Cricetulus_griseus_chok1gshd
ENSUAMG00000008283	PARN	96	73.134	ENSCGRG00000004939	Parn	74	73.134	Cricetulus_griseus_crigri
ENSUAMG00000008283	PARN	92	66.075	ENSCSEG00000002064	parn	65	66.075	Cynoglossus_semilaevis
ENSUAMG00000008283	PARN	96	65.272	ENSCVAG00000014848	parn	70	65.272	Cyprinodon_variegatus
ENSUAMG00000008283	PARN	100	63.395	ENSDARG00000102634	parn	75	63.395	Danio_rerio
ENSUAMG00000008283	PARN	90	83.257	ENSDNOG00000000833	PARN	77	83.257	Dasypus_novemcinctus
ENSUAMG00000008283	PARN	75	83.500	ENSETEG00000014828	-	55	84.080	Echinops_telfairi
ENSUAMG00000008283	PARN	96	78.801	ENSEASG00005011400	PARN	73	78.801	Equus_asinus_asinus
ENSUAMG00000008283	PARN	96	78.587	ENSECAG00000017792	PARN	73	78.587	Equus_caballus
ENSUAMG00000008283	PARN	94	65.367	ENSELUG00000013139	parn	58	69.037	Esox_lucius
ENSUAMG00000008283	PARN	90	85.092	ENSFCAG00000044961	PARN	68	85.092	Felis_catus
ENSUAMG00000008283	PARN	95	74.464	ENSFALG00000003911	PARN	72	74.464	Ficedula_albicollis
ENSUAMG00000008283	PARN	90	81.567	ENSFDAG00000009234	PARN	69	81.567	Fukomys_damarensis
ENSUAMG00000008283	PARN	94	58.581	ENSFHEG00000013738	parn	67	61.798	Fundulus_heteroclitus
ENSUAMG00000008283	PARN	94	65.675	ENSGMOG00000003231	parn	79	69.565	Gadus_morhua
ENSUAMG00000008283	PARN	95	75.107	ENSGALG00000003091	PARN	73	75.107	Gallus_gallus
ENSUAMG00000008283	PARN	94	65.904	ENSGAFG00000011061	parn	64	69.336	Gambusia_affinis
ENSUAMG00000008283	PARN	94	66.590	ENSGACG00000019501	parn	70	69.794	Gasterosteus_aculeatus
ENSUAMG00000008283	PARN	90	84.174	ENSGGOG00000025224	PARN	70	84.174	Gorilla_gorilla
ENSUAMG00000008283	PARN	90	72.603	ENSHBUG00000017906	parn	73	72.603	Haplochromis_burtoni
ENSUAMG00000008283	PARN	90	81.651	ENSHGLG00000010886	PARN	68	81.651	Heterocephalus_glaber_female
ENSUAMG00000008283	PARN	90	81.651	ENSHGLG00100014659	PARN	68	81.651	Heterocephalus_glaber_male
ENSUAMG00000008283	PARN	90	65.446	ENSHCOG00000008683	parn	75	65.446	Hippocampus_comes
ENSUAMG00000008283	PARN	94	59.251	ENSIPUG00000012401	parn	63	61.717	Ictalurus_punctatus
ENSUAMG00000008283	PARN	96	77.778	ENSSTOG00000007519	PARN	74	77.778	Ictidomys_tridecemlineatus
ENSUAMG00000008283	PARN	90	80.275	ENSJJAG00000023049	Parn	69	80.275	Jaculus_jaculus
ENSUAMG00000008283	PARN	90	70.709	ENSKMAG00000009462	parn	64	70.709	Kryptolebias_marmoratus
ENSUAMG00000008283	PARN	94	66.590	ENSLBEG00000009167	parn	68	70.252	Labrus_bergylta
ENSUAMG00000008283	PARN	89	72.581	ENSLACG00000004207	PARN	82	72.581	Latimeria_chalumnae
ENSUAMG00000008283	PARN	94	66.972	ENSLOCG00000000715	parn	66	68.889	Lepisosteus_oculatus
ENSUAMG00000008283	PARN	90	83.257	ENSLAFG00000015036	PARN	69	83.257	Loxodonta_africana
ENSUAMG00000008283	PARN	94	83.095	ENSMFAG00000044852	PARN	75	83.945	Macaca_fascicularis
ENSUAMG00000008283	PARN	90	84.174	ENSMMUG00000018849	PARN	68	84.174	Macaca_mulatta
ENSUAMG00000008283	PARN	94	83.095	ENSMNEG00000045108	PARN	67	86.493	Macaca_nemestrina
ENSUAMG00000008283	PARN	90	83.716	ENSMLEG00000031743	PARN	75	83.716	Mandrillus_leucophaeus
ENSUAMG00000008283	PARN	94	66.819	ENSMAMG00000006939	parn	63	70.709	Mastacembelus_armatus
ENSUAMG00000008283	PARN	94	68.192	ENSMZEG00005013590	parn	74	68.315	Maylandia_zebra
ENSUAMG00000008283	PARN	95	75.107	ENSMGAG00000001004	PARN	73	75.107	Meleagris_gallopavo
ENSUAMG00000008283	PARN	90	76.180	ENSMAUG00000008025	Parn	77	72.117	Mesocricetus_auratus
ENSUAMG00000008283	PARN	90	83.716	ENSMICG00000016053	PARN	68	83.716	Microcebus_murinus
ENSUAMG00000008283	PARN	94	73.394	ENSMOCG00000022211	Parn	87	77.419	Microtus_ochrogaster
ENSUAMG00000008283	PARN	94	66.279	ENSMMOG00000011333	parn	70	69.444	Mola_mola
ENSUAMG00000008283	PARN	94	77.803	ENSMODG00000004915	PARN	87	81.797	Monodelphis_domestica
ENSUAMG00000008283	PARN	94	67.735	ENSMALG00000019426	parn	74	71.167	Monopterus_albus
ENSUAMG00000008283	PARN	90	77.752	MGP_CAROLIEiJ_G0020466	Parn	73	73.820	Mus_caroli
ENSUAMG00000008283	PARN	90	77.982	ENSMUSG00000022685	Parn	67	83.562	Mus_musculus
ENSUAMG00000008283	PARN	52	30.645	ENSMUSG00000073460	Pnldc1	70	30.645	Mus_musculus
ENSUAMG00000008283	PARN	90	77.294	MGP_PahariEiJ_G0016172	Parn	69	77.294	Mus_pahari
ENSUAMG00000008283	PARN	94	73.853	MGP_SPRETEiJ_G0021361	Parn	69	77.982	Mus_spretus
ENSUAMG00000008283	PARN	90	85.780	ENSMPUG00000014464	PARN	68	85.780	Mustela_putorius_furo
ENSUAMG00000008283	PARN	94	77.523	ENSMLUG00000005414	PARN	88	81.797	Myotis_lucifugus
ENSUAMG00000008283	PARN	94	68.605	ENSNBRG00000006805	parn	73	71.167	Neolamprologus_brichardi
ENSUAMG00000008283	PARN	94	82.353	ENSNLEG00000010241	PARN	67	85.714	Nomascus_leucogenys
ENSUAMG00000008283	PARN	88	49.755	ENSMEUG00000008178	-	65	53.808	Notamacropus_eugenii
ENSUAMG00000008283	PARN	90	78.391	ENSOPRG00000012187	PARN	69	78.391	Ochotona_princeps
ENSUAMG00000008283	PARN	90	76.835	ENSODEG00000001617	PARN	69	76.835	Octodon_degus
ENSUAMG00000008283	PARN	94	68.349	ENSONIG00000000151	parn	67	71.889	Oreochromis_niloticus
ENSUAMG00000008283	PARN	50	74.359	ENSOANG00000020155	-	64	78.400	Ornithorhynchus_anatinus
ENSUAMG00000008283	PARN	90	83.908	ENSOCUG00000000322	PARN	69	83.908	Oryctolagus_cuniculus
ENSUAMG00000008283	PARN	94	65.217	ENSORLG00020010313	parn	67	67.406	Oryzias_latipes_hni
ENSUAMG00000008283	PARN	94	64.989	ENSORLG00015000300	parn	67	67.184	Oryzias_latipes_hsok
ENSUAMG00000008283	PARN	94	64.989	ENSOMEG00000019555	parn	65	68.650	Oryzias_melastigma
ENSUAMG00000008283	PARN	94	76.552	ENSOGAG00000014626	PARN	87	80.831	Otolemur_garnettii
ENSUAMG00000008283	PARN	94	79.817	ENSOARG00000007574	PARN	88	84.101	Ovis_aries
ENSUAMG00000008283	PARN	94	82.297	ENSPPAG00000031438	PARN	67	85.782	Pan_paniscus
ENSUAMG00000008283	PARN	90	84.862	ENSPPRG00000018583	PARN	68	84.862	Panthera_pardus
ENSUAMG00000008283	PARN	90	85.092	ENSPTIG00000012135	PARN	68	85.092	Panthera_tigris_altaica
ENSUAMG00000008283	PARN	94	82.297	ENSPTRG00000007792	PARN	67	85.782	Pan_troglodytes
ENSUAMG00000008283	PARN	94	84.746	ENSPANG00000020099	PARN	67	88.193	Papio_anubis
ENSUAMG00000008283	PARN	94	65.596	ENSPKIG00000022807	parn	69	67.972	Paramormyrops_kingsleyae
ENSUAMG00000008283	PARN	94	76.376	ENSPSIG00000014804	PARN	78	78.222	Pelodiscus_sinensis
ENSUAMG00000008283	PARN	94	68.085	ENSPMGG00000014431	parn	60	72.340	Periophthalmus_magnuspinnatus
ENSUAMG00000008283	PARN	94	72.936	ENSPEMG00000018439	Parn	74	70.299	Peromyscus_maniculatus_bairdii
ENSUAMG00000008283	PARN	94	57.623	ENSPMAG00000003956	parn	84	61.416	Petromyzon_marinus
ENSUAMG00000008283	PARN	78	74.184	ENSPCIG00000001259	PARN	78	77.101	Phascolarctos_cinereus
ENSUAMG00000008283	PARN	94	65.675	ENSPFOG00000012823	parn	64	69.336	Poecilia_formosa
ENSUAMG00000008283	PARN	94	65.904	ENSPLAG00000006395	parn	64	69.565	Poecilia_latipinna
ENSUAMG00000008283	PARN	94	65.904	ENSPMEG00000007711	parn	64	69.565	Poecilia_mexicana
ENSUAMG00000008283	PARN	94	65.446	ENSPREG00000000147	parn	64	69.108	Poecilia_reticulata
ENSUAMG00000008283	PARN	90	83.716	ENSPPYG00000007123	PARN	68	83.716	Pongo_abelii
ENSUAMG00000008283	PARN	88	75.854	ENSPCAG00000001741	PARN	67	76.471	Procavia_capensis
ENSUAMG00000008283	PARN	90	82.898	ENSPCOG00000019292	PARN	67	82.898	Propithecus_coquereli
ENSUAMG00000008283	PARN	90	78.670	ENSPVAG00000002547	PARN	69	78.670	Pteropus_vampyrus
ENSUAMG00000008283	PARN	94	68.192	ENSPNYG00000006835	parn	73	68.950	Pundamilia_nyererei
ENSUAMG00000008283	PARN	98	65.481	ENSPNAG00000018905	parn	79	65.481	Pygocentrus_nattereri
ENSUAMG00000008283	PARN	90	77.523	ENSRNOG00000002912	Parn	98	86.869	Rattus_norvegicus
ENSUAMG00000008283	PARN	94	81.119	ENSSBOG00000034726	PARN	67	84.527	Saimiri_boliviensis_boliviensis
ENSUAMG00000008283	PARN	74	78.237	ENSSHAG00000008493	PARN	81	78.237	Sarcophilus_harrisii
ENSUAMG00000008283	PARN	90	69.954	ENSSFOG00015014165	parn	72	67.890	Scleropages_formosus
ENSUAMG00000008283	PARN	94	64.760	ENSSMAG00000000685	parn	71	65.826	Scophthalmus_maximus
ENSUAMG00000008283	PARN	94	67.277	ENSSDUG00000014555	parn	63	71.167	Seriola_dumerili
ENSUAMG00000008283	PARN	94	78.391	ENSSARG00000014339	PARN	75	82.448	Sorex_araneus
ENSUAMG00000008283	PARN	90	78.670	ENSSPUG00000007719	PARN	68	78.670	Sphenodon_punctatus
ENSUAMG00000008283	PARN	100	66.393	ENSSPAG00000007095	parn	78	61.491	Stegastes_partitus
ENSUAMG00000008283	PARN	94	80.275	ENSSSCG00000007878	PARN	63	82.222	Sus_scrofa
ENSUAMG00000008283	PARN	95	75.107	ENSTGUG00000004971	PARN	73	75.107	Taeniopygia_guttata
ENSUAMG00000008283	PARN	94	66.590	ENSTNIG00000008252	parn	71	68.736	Tetraodon_nigroviridis
ENSUAMG00000008283	PARN	90	66.055	ENSTBEG00000010407	PARN	77	64.444	Tupaia_belangeri
ENSUAMG00000008283	PARN	94	80.324	ENSTTRG00000002843	PARN	68	84.651	Tursiops_truncatus
ENSUAMG00000008283	PARN	90	86.239	ENSUMAG00000004527	PARN	68	86.239	Ursus_maritimus
ENSUAMG00000008283	PARN	94	77.752	ENSVPAG00000008968	PARN	71	78.670	Vicugna_pacos
ENSUAMG00000008283	PARN	90	85.321	ENSVVUG00000019509	PARN	68	85.321	Vulpes_vulpes
ENSUAMG00000008283	PARN	94	67.661	ENSXETG00000010994	parn	83	71.101	Xenopus_tropicalis
ENSUAMG00000008283	PARN	94	62.442	ENSXCOG00000015990	parn	73	66.129	Xiphophorus_couchianus
ENSUAMG00000008283	PARN	94	65.675	ENSXMAG00000014783	parn	64	69.336	Xiphophorus_maculatus