EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000008395 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 17223 bases
Position: chrLZNR01005030.1:73367-90589
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000010169	ResIII	PF04851.15	6.7e-12	1	1
ENSUAMP00000010169	DEAD	PF00270.29	5.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000011438	-	1740	-	ENSUAMP00000010171	579 (aa)	-	-
ENSUAMT00000011436	-	3138	-	ENSUAMP00000010169	1045 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000008395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000008395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000008395	-	54	50.996	ENSUAMG00000023340	-	73	50.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000008395	-	95	93.023	ENSG00000144028	SNRNP200	75	93.023	Homo_sapiens
ENSUAMG00000008395	-	95	83.430	ENSAPOG00000010223	snrnp200	75	83.721	Acanthochromis_polyacanthus
ENSUAMG00000008395	-	95	93.023	ENSAMEG00000008996	SNRNP200	75	93.023	Ailuropoda_melanoleuca
ENSUAMG00000008395	-	90	82.263	ENSACIG00000001764	snrnp200	81	82.569	Amphilophus_citrinellus
ENSUAMG00000008395	-	95	83.333	ENSAOCG00000024593	snrnp200	83	82.059	Amphiprion_ocellaris
ENSUAMG00000008395	-	90	81.753	ENSAPEG00000012554	snrnp200	83	82.059	Amphiprion_percula
ENSUAMG00000008395	-	95	83.624	ENSATEG00000022522	snrnp200	75	83.915	Anabas_testudineus
ENSUAMG00000008395	-	93	91.445	ENSAPLG00000004313	SNRNP200	75	91.445	Anas_platyrhynchos
ENSUAMG00000008395	-	95	91.667	ENSACAG00000000434	SNRNP200	82	91.667	Anolis_carolinensis
ENSUAMG00000008395	-	95	94.810	ENSANAG00000036625	SNRNP200	74	94.810	Aotus_nancymaae
ENSUAMG00000008395	-	95	83.236	ENSACLG00000011188	snrnp200	81	82.492	Astatotilapia_calliptera
ENSUAMG00000008395	-	95	83.140	ENSAMXG00000005684	snrnp200	75	82.946	Astyanax_mexicanus
ENSUAMG00000008395	-	95	92.829	ENSBTAG00000000848	SNRNP200	76	92.829	Bos_taurus
ENSUAMG00000008395	-	95	93.023	ENSCJAG00000007514	SNRNP200	95	90.729	Callithrix_jacchus
ENSUAMG00000008395	-	95	93.144	ENSCAFG00020019979	SNRNP200	95	90.729	Canis_lupus_dingo
ENSUAMG00000008395	-	95	92.829	ENSCHIG00000020611	SNRNP200	75	92.829	Capra_hircus
ENSUAMG00000008395	-	95	93.100	ENSTSYG00000010467	SNRNP200	95	90.729	Carlito_syrichta
ENSUAMG00000008395	-	93	92.338	ENSCAPG00000017234	SNRNP200	75	92.338	Cavia_aperea
ENSUAMG00000008395	-	95	92.539	ENSCPOG00000006776	SNRNP200	75	92.539	Cavia_porcellus
ENSUAMG00000008395	-	95	93.023	ENSCCAG00000033962	SNRNP200	95	90.729	Cebus_capucinus
ENSUAMG00000008395	-	95	93.023	ENSCATG00000015790	SNRNP200	95	90.729	Cercocebus_atys
ENSUAMG00000008395	-	95	92.442	ENSCLAG00000004116	SNRNP200	75	92.442	Chinchilla_lanigera
ENSUAMG00000008395	-	95	93.023	ENSCSAG00000017369	SNRNP200	75	93.023	Chlorocebus_sabaeus
ENSUAMG00000008395	-	95	91.570	ENSCPBG00000022571	SNRNP200	75	91.570	Chrysemys_picta_bellii
ENSUAMG00000008395	-	95	71.002	ENSCING00000005082	-	75	71.291	Ciona_intestinalis
ENSUAMG00000008395	-	95	85.558	ENSCANG00000033932	SNRNP200	70	97.860	Colobus_angolensis_palliatus
ENSUAMG00000008395	-	95	92.829	ENSCGRG00001022610	Snrnp200	75	92.829	Cricetulus_griseus_chok1gshd
ENSUAMG00000008395	-	95	92.829	ENSCGRG00000016472	Snrnp200	75	92.829	Cricetulus_griseus_crigri
ENSUAMG00000008395	-	95	82.558	ENSCSEG00000016399	snrnp200	75	82.558	Cynoglossus_semilaevis
ENSUAMG00000008395	-	95	78.488	ENSCVAG00000017631	snrnp200	74	78.488	Cyprinodon_variegatus
ENSUAMG00000008395	-	95	83.043	ENSDARG00000077536	snrnp200	75	82.849	Danio_rerio
ENSUAMG00000008395	-	95	92.636	ENSDNOG00000011227	SNRNP200	75	92.636	Dasypus_novemcinctus
ENSUAMG00000008395	-	95	95.319	ENSDORG00000005861	Snrnp200	75	95.319	Dipodomys_ordii
ENSUAMG00000008395	-	95	68.690	FBgn0263599	l(3)72Ab	74	68.497	Drosophila_melanogaster
ENSUAMG00000008395	-	95	92.733	ENSETEG00000000162	SNRNP200	55	92.733	Echinops_telfairi
ENSUAMG00000008395	-	64	79.649	ENSEBUG00000016524	snrnp200	75	79.649	Eptatretus_burgeri
ENSUAMG00000008395	-	95	90.682	ENSEASG00005001884	SNRNP200	75	90.490	Equus_asinus_asinus
ENSUAMG00000008395	-	95	92.926	ENSECAG00000019675	SNRNP200	77	92.926	Equus_caballus
ENSUAMG00000008395	-	81	100.000	ENSEEUG00000012178	SNRNP200	70	100.000	Erinaceus_europaeus
ENSUAMG00000008395	-	95	83.430	ENSELUG00000018948	snrnp200	75	83.236	Esox_lucius
ENSUAMG00000008395	-	95	93.023	ENSFCAG00000010699	SNRNP200	75	93.023	Felis_catus
ENSUAMG00000008395	-	92	73.214	ENSFALG00000001368	-	75	72.906	Ficedula_albicollis
ENSUAMG00000008395	-	95	92.636	ENSFDAG00000004683	SNRNP200	75	92.636	Fukomys_damarensis
ENSUAMG00000008395	-	95	78.101	ENSFHEG00000003786	snrnp200	74	78.101	Fundulus_heteroclitus
ENSUAMG00000008395	-	95	83.656	ENSGMOG00000004881	snrnp200	75	83.366	Gadus_morhua
ENSUAMG00000008395	-	95	78.391	ENSGAFG00000010807	snrnp200	74	78.391	Gambusia_affinis
ENSUAMG00000008395	-	95	83.092	ENSGACG00000011474	snrnp200	75	82.705	Gasterosteus_aculeatus
ENSUAMG00000008395	-	95	88.723	ENSGAGG00000016069	SNRNP200	94	85.233	Gopherus_agassizii
ENSUAMG00000008395	-	95	93.023	ENSGGOG00000005174	SNRNP200	95	90.729	Gorilla_gorilla
ENSUAMG00000008395	-	90	82.170	ENSHBUG00000011322	snrnp200	81	82.492	Haplochromis_burtoni
ENSUAMG00000008395	-	95	92.636	ENSHGLG00000006654	SNRNP200	75	92.636	Heterocephalus_glaber_female
ENSUAMG00000008395	-	95	92.636	ENSHGLG00100018594	SNRNP200	75	92.636	Heterocephalus_glaber_male
ENSUAMG00000008395	-	95	93.023	ENSSTOG00000016351	SNRNP200	75	93.023	Ictidomys_tridecemlineatus
ENSUAMG00000008395	-	95	92.733	ENSJJAG00000023659	Snrnp200	76	92.733	Jaculus_jaculus
ENSUAMG00000008395	-	95	78.488	ENSKMAG00000003665	snrnp200	74	78.488	Kryptolebias_marmoratus
ENSUAMG00000008395	-	95	83.430	ENSLBEG00000021585	snrnp200	75	83.721	Labrus_bergylta
ENSUAMG00000008395	-	60	92.175	ENSLACG00000000226	SNRNP200	69	92.175	Latimeria_chalumnae
ENSUAMG00000008395	-	95	85.078	ENSLOCG00000015198	snrnp200	75	85.078	Lepisosteus_oculatus
ENSUAMG00000008395	-	95	92.539	ENSLAFG00000015626	SNRNP200	75	92.539	Loxodonta_africana
ENSUAMG00000008395	-	95	93.023	ENSMFAG00000040174	SNRNP200	95	90.729	Macaca_fascicularis
ENSUAMG00000008395	-	95	93.023	ENSMMUG00000023261	SNRNP200	95	90.729	Macaca_mulatta
ENSUAMG00000008395	-	95	92.926	ENSMNEG00000032398	SNRNP200	95	90.578	Macaca_nemestrina
ENSUAMG00000008395	-	95	93.023	ENSMLEG00000019083	SNRNP200	95	90.729	Mandrillus_leucophaeus
ENSUAMG00000008395	-	95	83.253	ENSMAMG00000007851	snrnp200	75	83.156	Mastacembelus_armatus
ENSUAMG00000008395	-	90	82.170	ENSMZEG00005010787	snrnp200	81	82.492	Maylandia_zebra
ENSUAMG00000008395	-	88	90.654	ENSMGAG00000001831	SNRNP200	74	90.710	Meleagris_gallopavo
ENSUAMG00000008395	-	95	92.926	ENSMAUG00000011825	Snrnp200	75	92.926	Mesocricetus_auratus
ENSUAMG00000008395	-	95	92.829	ENSMICG00000004710	SNRNP200	95	90.426	Microcebus_murinus
ENSUAMG00000008395	-	95	89.792	ENSMOCG00000011814	Snrnp200	74	89.970	Microtus_ochrogaster
ENSUAMG00000008395	-	95	83.140	ENSMMOG00000014167	snrnp200	75	83.430	Mola_mola
ENSUAMG00000008395	-	95	91.957	ENSMODG00000008475	SNRNP200	75	91.957	Monodelphis_domestica
ENSUAMG00000008395	-	95	83.527	ENSMALG00000001973	snrnp200	75	83.818	Monopterus_albus
ENSUAMG00000008395	-	95	92.636	MGP_CAROLIEiJ_G0024250	Snrnp200	75	92.636	Mus_caroli
ENSUAMG00000008395	-	95	92.636	ENSMUSG00000003660	Snrnp200	75	92.636	Mus_musculus
ENSUAMG00000008395	-	95	92.733	MGP_PahariEiJ_G0025695	Snrnp200	75	92.733	Mus_pahari
ENSUAMG00000008395	-	90	100.000	MGP_SPRETEiJ_G0025170	Snrnp200	74	100.000	Mus_spretus
ENSUAMG00000008395	-	95	93.023	ENSMPUG00000008949	SNRNP200	75	93.023	Mustela_putorius_furo
ENSUAMG00000008395	-	95	92.367	ENSMLUG00000010493	SNRNP200	75	92.367	Myotis_lucifugus
ENSUAMG00000008395	-	95	89.244	ENSMLUG00000027511	-	75	89.244	Myotis_lucifugus
ENSUAMG00000008395	-	95	92.926	ENSNGAG00000021993	Snrnp200	75	92.926	Nannospalax_galili
ENSUAMG00000008395	-	79	86.754	ENSNBRG00000017960	snrnp200	80	86.754	Neolamprologus_brichardi
ENSUAMG00000008395	-	95	88.802	ENSNLEG00000000025	SNRNP200	95	90.110	Nomascus_leucogenys
ENSUAMG00000008395	-	95	90.338	ENSMEUG00000010532	SNRNP200	58	90.164	Notamacropus_eugenii
ENSUAMG00000008395	-	95	84.884	ENSOPRG00000015464	SNRNP200	75	84.884	Ochotona_princeps
ENSUAMG00000008395	-	95	92.539	ENSODEG00000008366	SNRNP200	75	92.539	Octodon_degus
ENSUAMG00000008395	-	95	83.236	ENSONIG00000010714	snrnp200	75	83.527	Oreochromis_niloticus
ENSUAMG00000008395	-	95	92.829	ENSOCUG00000009864	SNRNP200	75	92.829	Oryctolagus_cuniculus
ENSUAMG00000008395	-	95	82.558	ENSORLG00000012286	snrnp200	75	82.558	Oryzias_latipes
ENSUAMG00000008395	-	95	82.752	ENSORLG00020004648	snrnp200	75	82.752	Oryzias_latipes_hni
ENSUAMG00000008395	-	95	82.655	ENSORLG00015019114	snrnp200	72	86.445	Oryzias_latipes_hsok
ENSUAMG00000008395	-	95	82.946	ENSOMEG00000011834	snrnp200	75	82.946	Oryzias_melastigma
ENSUAMG00000008395	-	95	93.023	ENSOGAG00000006879	SNRNP200	75	93.023	Otolemur_garnettii
ENSUAMG00000008395	-	95	92.829	ENSOARG00000013949	SNRNP200	75	92.829	Ovis_aries
ENSUAMG00000008395	-	95	93.023	ENSPPAG00000041559	SNRNP200	95	90.729	Pan_paniscus
ENSUAMG00000008395	-	95	93.023	ENSPPRG00000004435	SNRNP200	75	93.023	Panthera_pardus
ENSUAMG00000008395	-	95	93.023	ENSPTIG00000006380	SNRNP200	75	93.023	Panthera_tigris_altaica
ENSUAMG00000008395	-	95	93.023	ENSPTRG00000012230	SNRNP200	98	87.873	Pan_troglodytes
ENSUAMG00000008395	-	95	93.023	ENSPANG00000006017	SNRNP200	95	90.729	Papio_anubis
ENSUAMG00000008395	-	95	83.818	ENSPKIG00000014762	snrnp200	75	83.818	Paramormyrops_kingsleyae
ENSUAMG00000008395	-	95	91.384	ENSPSIG00000008580	SNRNP200	75	91.208	Pelodiscus_sinensis
ENSUAMG00000008395	-	60	91.118	ENSPEMG00000020700	-	95	91.118	Peromyscus_maniculatus_bairdii
ENSUAMG00000008395	-	95	92.054	ENSPCIG00000023050	SNRNP200	75	92.054	Phascolarctos_cinereus
ENSUAMG00000008395	-	95	83.236	ENSPFOG00000015110	snrnp200	75	83.236	Poecilia_formosa
ENSUAMG00000008395	-	91	82.569	ENSPLAG00000006711	snrnp200	85	82.569	Poecilia_latipinna
ENSUAMG00000008395	-	91	82.467	ENSPMEG00000021166	snrnp200	85	82.467	Poecilia_mexicana
ENSUAMG00000008395	-	95	83.236	ENSPREG00000008875	snrnp200	75	83.236	Poecilia_reticulata
ENSUAMG00000008395	-	95	93.023	ENSPPYG00000012068	SNRNP200	75	93.023	Pongo_abelii
ENSUAMG00000008395	-	80	100.000	ENSPCAG00000008536	SNRNP200	55	100.000	Procavia_capensis
ENSUAMG00000008395	-	95	92.926	ENSPCOG00000024608	SNRNP200	95	90.578	Propithecus_coquereli
ENSUAMG00000008395	-	87	85.129	ENSPVAG00000005860	SNRNP200	71	85.129	Pteropus_vampyrus
ENSUAMG00000008395	-	95	78.004	ENSPNYG00000017476	snrnp200	73	78.310	Pundamilia_nyererei
ENSUAMG00000008395	-	95	77.519	ENSPNAG00000010998	snrnp200	75	77.519	Pygocentrus_nattereri
ENSUAMG00000008395	-	95	92.926	ENSRNOG00000012157	Snrnp200	75	92.926	Rattus_norvegicus
ENSUAMG00000008395	-	95	93.023	ENSRBIG00000044690	-	95	90.729	Rhinopithecus_bieti
ENSUAMG00000008395	-	95	93.023	ENSRROG00000037952	-	95	90.729	Rhinopithecus_roxellana
ENSUAMG00000008395	-	95	93.023	ENSSBOG00000035471	SNRNP200	95	90.729	Saimiri_boliviensis_boliviensis
ENSUAMG00000008395	-	88	91.381	ENSSHAG00000000758	SNRNP200	74	91.441	Sarcophilus_harrisii
ENSUAMG00000008395	-	95	83.527	ENSSFOG00015018826	snrnp200	75	83.527	Scleropages_formosus
ENSUAMG00000008395	-	95	83.236	ENSSMAG00000005463	snrnp200	82	82.773	Scophthalmus_maximus
ENSUAMG00000008395	-	95	83.430	ENSSDUG00000021410	snrnp200	75	83.721	Seriola_dumerili
ENSUAMG00000008395	-	95	83.624	ENSSLDG00000010884	snrnp200	75	83.915	Seriola_lalandi_dorsalis
ENSUAMG00000008395	-	87	97.208	ENSSARG00000010728	SNRNP200	70	97.208	Sorex_araneus
ENSUAMG00000008395	-	95	90.795	ENSSPUG00000003726	-	75	90.891	Sphenodon_punctatus
ENSUAMG00000008395	-	95	83.430	ENSSPAG00000001842	snrnp200	82	82.977	Stegastes_partitus
ENSUAMG00000008395	-	95	92.829	ENSSSCG00000008127	SNRNP200	82	92.457	Sus_scrofa
ENSUAMG00000008395	-	93	79.490	ENSTGUG00000014475	-	84	79.588	Taeniopygia_guttata
ENSUAMG00000008395	-	95	82.849	ENSTRUG00000001307	snrnp200	95	78.485	Takifugu_rubripes
ENSUAMG00000008395	-	95	82.806	ENSTNIG00000004320	snrnp200	67	82.806	Tetraodon_nigroviridis
ENSUAMG00000008395	-	95	92.919	ENSTTRG00000004983	SNRNP200	75	92.919	Tursiops_truncatus
ENSUAMG00000008395	-	95	93.023	ENSUMAG00000012385	SNRNP200	75	93.023	Ursus_maritimus
ENSUAMG00000008395	-	95	93.023	ENSVVUG00000026247	SNRNP200	95	90.729	Vulpes_vulpes
ENSUAMG00000008395	-	95	87.209	ENSXETG00000001243	snrnp200	75	87.306	Xenopus_tropicalis
ENSUAMG00000008395	-	90	82.569	ENSXMAG00000002058	snrnp200	81	82.569	Xiphophorus_maculatus