EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000008403 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 23179 bases
Position: chrLZNR01005995.1:222395-245573
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000010189	RRM_1	PF00076.22	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000011456	-	448	-	ENSUAMP00000010189	130 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000008403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000008403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000008403	-	62	72.840	ENSUAMG00000022662	-	77	70.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000008403	-	86	98.230	ENSG00000116754	SRSF11	88	98.230	Homo_sapiens
ENSUAMG00000008403	-	65	71.429	ENSG00000153914	SREK1	81	72.840	Homo_sapiens
ENSUAMG00000008403	-	65	80.000	ENSAPOG00000007244	-	59	81.707	Acanthochromis_polyacanthus
ENSUAMG00000008403	-	74	72.917	ENSAPOG00000004488	-	76	80.488	Acanthochromis_polyacanthus
ENSUAMG00000008403	-	65	79.762	ENSACIG00000012348	-	85	81.481	Amphilophus_citrinellus
ENSUAMG00000008403	-	74	72.917	ENSACIG00000018075	-	76	80.488	Amphilophus_citrinellus
ENSUAMG00000008403	-	66	69.767	ENSACIG00000015055	-	65	71.605	Amphilophus_citrinellus
ENSUAMG00000008403	-	66	75.581	ENSAOCG00000000739	-	84	81.013	Amphiprion_ocellaris
ENSUAMG00000008403	-	66	68.605	ENSAOCG00000024368	-	82	70.370	Amphiprion_ocellaris
ENSUAMG00000008403	-	74	72.917	ENSAPEG00000003619	SRSF11	76	80.488	Amphiprion_percula
ENSUAMG00000008403	-	65	79.762	ENSAPEG00000003142	SRSF11	84	81.481	Amphiprion_percula
ENSUAMG00000008403	-	66	68.605	ENSAPEG00000002218	-	88	70.370	Amphiprion_percula
ENSUAMG00000008403	-	71	76.087	ENSATEG00000011691	srsf11	76	82.927	Anabas_testudineus
ENSUAMG00000008403	-	74	72.917	ENSATEG00000007534	-	76	80.488	Anabas_testudineus
ENSUAMG00000008403	-	65	69.048	ENSATEG00000009464	-	89	70.370	Anabas_testudineus
ENSUAMG00000008403	-	76	65.657	ENSANAG00000031358	SREK1	81	72.840	Aotus_nancymaae
ENSUAMG00000008403	-	65	80.000	ENSACLG00000000623	srsf11	84	81.707	Astatotilapia_calliptera
ENSUAMG00000008403	-	74	65.625	ENSBTAG00000007321	SREK1	81	72.840	Bos_taurus
ENSUAMG00000008403	-	74	66.667	ENSCJAG00000015950	SREK1	81	72.840	Callithrix_jacchus
ENSUAMG00000008403	-	66	97.701	ENSCAFG00020017255	-	99	89.744	Canis_lupus_dingo
ENSUAMG00000008403	-	65	71.429	ENSCAFG00020019449	-	81	72.840	Canis_lupus_dingo
ENSUAMG00000008403	-	62	72.840	ENSCHIG00000025052	-	81	72.840	Capra_hircus
ENSUAMG00000008403	-	87	97.345	ENSCHIG00000025295	SRSF11	96	97.345	Capra_hircus
ENSUAMG00000008403	-	65	71.429	ENSTSYG00000036957	SREK1	81	72.840	Carlito_syrichta
ENSUAMG00000008403	-	62	95.062	ENSTSYG00000033270	-	57	95.062	Carlito_syrichta
ENSUAMG00000008403	-	76	65.657	ENSCCAG00000020591	SREK1	81	72.840	Cebus_capucinus
ENSUAMG00000008403	-	62	72.840	ENSCATG00000031482	SREK1	81	72.840	Cercocebus_atys
ENSUAMG00000008403	-	65	69.048	ENSCPBG00000026866	SREK1	64	69.048	Chrysemys_picta_bellii
ENSUAMG00000008403	-	82	74.312	ENSCPBG00000022430	-	72	90.123	Chrysemys_picta_bellii
ENSUAMG00000008403	-	62	72.840	ENSCANG00000030421	SREK1	81	72.840	Colobus_angolensis_palliatus
ENSUAMG00000008403	-	65	69.412	ENSCSEG00000013934	-	86	69.737	Cynoglossus_semilaevis
ENSUAMG00000008403	-	68	67.416	ENSCVAG00000002404	-	68	69.048	Cyprinodon_variegatus
ENSUAMG00000008403	-	69	80.220	ENSDARG00000098574	srsf11	89	83.951	Danio_rerio
ENSUAMG00000008403	-	65	70.238	ENSDORG00000023160	-	64	70.238	Dipodomys_ordii
ENSUAMG00000008403	-	89	94.872	ENSEASG00005007847	SRSF11	99	94.872	Equus_asinus_asinus
ENSUAMG00000008403	-	65	71.429	ENSEASG00005006832	-	71	72.840	Equus_asinus_asinus
ENSUAMG00000008403	-	65	71.429	ENSECAG00000035731	-	70	72.840	Equus_caballus
ENSUAMG00000008403	-	62	71.605	ENSFCAG00000036884	-	81	71.605	Felis_catus
ENSUAMG00000008403	-	100	99.231	ENSFCAG00000034448	-	100	99.231	Felis_catus
ENSUAMG00000008403	-	69	66.667	ENSFHEG00000020959	-	65	67.857	Fundulus_heteroclitus
ENSUAMG00000008403	-	62	70.370	ENSGALG00000043541	SREK1	82	70.370	Gallus_gallus
ENSUAMG00000008403	-	85	85.455	ENSGALG00000011305	SRSF11	51	95.789	Gallus_gallus
ENSUAMG00000008403	-	71	66.304	ENSGAFG00000001732	-	71	67.816	Gambusia_affinis
ENSUAMG00000008403	-	65	69.048	ENSGAGG00000006087	SREK1	64	69.048	Gopherus_agassizii
ENSUAMG00000008403	-	67	94.253	ENSGAGG00000022411	-	84	94.253	Gopherus_agassizii
ENSUAMG00000008403	-	65	71.429	ENSGGOG00000004737	SREK1	81	72.840	Gorilla_gorilla
ENSUAMG00000008403	-	75	65.000	ENSHBUG00000007082	-	63	69.048	Haplochromis_burtoni
ENSUAMG00000008403	-	65	82.143	ENSHCOG00000016860	-	84	82.927	Hippocampus_comes
ENSUAMG00000008403	-	75	61.856	ENSHCOG00000017228	-	89	60.606	Hippocampus_comes
ENSUAMG00000008403	-	62	72.840	ENSSTOG00000008850	SREK1	81	72.840	Ictidomys_tridecemlineatus
ENSUAMG00000008403	-	65	69.048	ENSJJAG00000008846	-	65	69.048	Jaculus_jaculus
ENSUAMG00000008403	-	65	71.765	ENSLBEG00000022954	-	59	72.840	Labrus_bergylta
ENSUAMG00000008403	-	65	81.176	ENSLBEG00000024167	srsf11	84	82.927	Labrus_bergylta
ENSUAMG00000008403	-	65	71.429	ENSMFAG00000039823	SREK1	81	72.840	Macaca_fascicularis
ENSUAMG00000008403	-	62	72.840	ENSMMUG00000014586	SREK1	74	72.840	Macaca_mulatta
ENSUAMG00000008403	-	62	72.840	ENSMNEG00000030723	SREK1	81	72.840	Macaca_nemestrina
ENSUAMG00000008403	-	62	72.840	ENSMLEG00000039078	SREK1	81	72.840	Mandrillus_leucophaeus
ENSUAMG00000008403	-	63	71.951	ENSMAMG00000003099	-	79	71.605	Mastacembelus_armatus
ENSUAMG00000008403	-	74	72.917	ENSMAMG00000015002	-	77	80.488	Mastacembelus_armatus
ENSUAMG00000008403	-	71	64.130	ENSMZEG00005005707	-	62	69.620	Maylandia_zebra
ENSUAMG00000008403	-	62	72.840	ENSMICG00000034959	SREK1	81	72.840	Microcebus_murinus
ENSUAMG00000008403	-	65	78.571	ENSMMOG00000008877	-	80	80.247	Mola_mola
ENSUAMG00000008403	-	74	72.917	ENSMMOG00000016751	-	76	80.488	Mola_mola
ENSUAMG00000008403	-	75	61.856	ENSMALG00000017086	srek1	91	67.901	Monopterus_albus
ENSUAMG00000008403	-	65	78.824	ENSMALG00000016608	srsf11	84	80.488	Monopterus_albus
ENSUAMG00000008403	-	65	98.824	MGP_CAROLIEiJ_G0025767	Srsf11	99	85.470	Mus_caroli
ENSUAMG00000008403	-	65	98.824	ENSMUSG00000055436	Srsf11	99	85.470	Mus_musculus
ENSUAMG00000008403	-	65	98.824	MGP_PahariEiJ_G0027217	Srsf11	99	85.470	Mus_pahari
ENSUAMG00000008403	-	65	98.824	MGP_SPRETEiJ_G0026719	Srsf11	99	85.470	Mus_spretus
ENSUAMG00000008403	-	65	70.238	ENSNGAG00000014631	-	64	70.238	Nannospalax_galili
ENSUAMG00000008403	-	74	65.657	ENSNBRG00000010656	-	63	69.048	Neolamprologus_brichardi
ENSUAMG00000008403	-	65	79.762	ENSNBRG00000020213	-	85	81.481	Neolamprologus_brichardi
ENSUAMG00000008403	-	62	72.840	ENSNLEG00000003827	SREK1	81	72.840	Nomascus_leucogenys
ENSUAMG00000008403	-	65	71.429	ENSODEG00000016218	-	79	72.840	Octodon_degus
ENSUAMG00000008403	-	69	77.778	ENSORLG00000030366	-	79	77.778	Oryzias_latipes
ENSUAMG00000008403	-	58	69.737	ENSORLG00000002711	-	63	69.737	Oryzias_latipes
ENSUAMG00000008403	-	74	72.917	ENSORLG00020009393	-	79	77.778	Oryzias_latipes_hni
ENSUAMG00000008403	-	65	67.857	ENSORLG00020012815	-	64	67.857	Oryzias_latipes_hni
ENSUAMG00000008403	-	71	67.391	ENSORLG00015020455	-	66	67.857	Oryzias_latipes_hsok
ENSUAMG00000008403	-	74	72.917	ENSORLG00015009374	-	79	77.778	Oryzias_latipes_hsok
ENSUAMG00000008403	-	65	71.429	ENSPPAG00000031605	SREK1	74	72.840	Pan_paniscus
ENSUAMG00000008403	-	62	71.605	ENSPPRG00000024617	SREK1	81	71.605	Panthera_pardus
ENSUAMG00000008403	-	62	71.605	ENSPTIG00000006608	SREK1	81	71.605	Panthera_tigris_altaica
ENSUAMG00000008403	-	65	71.429	ENSPTRG00000016936	SREK1	81	72.840	Pan_troglodytes
ENSUAMG00000008403	-	65	71.429	ENSPANG00000008953	SREK1	81	72.840	Papio_anubis
ENSUAMG00000008403	-	65	78.571	ENSPKIG00000021576	-	85	81.481	Paramormyrops_kingsleyae
ENSUAMG00000008403	-	68	72.727	ENSPMGG00000005045	-	75	74.419	Periophthalmus_magnuspinnatus
ENSUAMG00000008403	-	81	62.857	ENSPMGG00000017029	-	83	65.657	Periophthalmus_magnuspinnatus
ENSUAMG00000008403	-	64	79.518	ENSPMGG00000000954	-	76	80.247	Periophthalmus_magnuspinnatus
ENSUAMG00000008403	-	68	68.182	ENSPLAG00000008818	-	64	67.816	Poecilia_latipinna
ENSUAMG00000008403	-	68	68.182	ENSPLAG00000014609	-	64	67.816	Poecilia_latipinna
ENSUAMG00000008403	-	74	72.917	ENSPLAG00000009484	-	57	80.488	Poecilia_latipinna
ENSUAMG00000008403	-	75	72.727	ENSPMEG00000018837	srsf11	79	73.958	Poecilia_mexicana
ENSUAMG00000008403	-	74	72.917	ENSPMEG00000023453	-	57	80.488	Poecilia_mexicana
ENSUAMG00000008403	-	68	68.182	ENSPMEG00000006607	-	64	67.816	Poecilia_mexicana
ENSUAMG00000008403	-	68	68.182	ENSPMEG00000006824	-	64	67.816	Poecilia_mexicana
ENSUAMG00000008403	-	68	68.539	ENSPREG00000019922	-	67	70.238	Poecilia_reticulata
ENSUAMG00000008403	-	65	71.429	ENSPCOG00000026230	SREK1	81	72.840	Propithecus_coquereli
ENSUAMG00000008403	-	75	65.000	ENSPNYG00000007178	-	63	69.048	Pundamilia_nyererei
ENSUAMG00000008403	-	100	99.231	ENSRBIG00000042971	SRSF11	100	99.231	Rhinopithecus_bieti
ENSUAMG00000008403	-	65	71.429	ENSRBIG00000033818	SREK1	81	72.840	Rhinopithecus_bieti
ENSUAMG00000008403	-	62	72.840	ENSRROG00000017210	SREK1	81	72.840	Rhinopithecus_roxellana
ENSUAMG00000008403	-	76	65.657	ENSSBOG00000031230	SREK1	81	72.840	Saimiri_boliviensis_boliviensis
ENSUAMG00000008403	-	100	98.462	ENSSBOG00000033461	SRSF11	100	98.462	Saimiri_boliviensis_boliviensis
ENSUAMG00000008403	-	58	82.895	ENSSFOG00015016086	-	69	82.895	Scleropages_formosus
ENSUAMG00000008403	-	63	71.951	ENSSDUG00000010395	-	80	71.605	Seriola_dumerili
ENSUAMG00000008403	-	74	72.917	ENSSLDG00000012105	-	76	80.488	Seriola_lalandi_dorsalis
ENSUAMG00000008403	-	65	80.000	ENSSLDG00000015477	-	84	81.707	Seriola_lalandi_dorsalis
ENSUAMG00000008403	-	63	71.951	ENSSLDG00000016285	-	80	71.605	Seriola_lalandi_dorsalis
ENSUAMG00000008403	-	68	67.045	ENSSPAG00000022310	-	82	70.370	Stegastes_partitus
ENSUAMG00000008403	-	74	72.917	ENSSPAG00000016483	-	69	77.907	Stegastes_partitus
ENSUAMG00000008403	-	65	70.588	ENSTRUG00000022058	-	66	71.605	Takifugu_rubripes
ENSUAMG00000008403	-	65	71.429	ENSVVUG00000005888	-	81	72.840	Vulpes_vulpes
ENSUAMG00000008403	-	70	67.033	ENSXCOG00000017792	-	68	67.816	Xiphophorus_couchianus
ENSUAMG00000008403	-	69	80.000	ENSXCOG00000003220	-	71	82.927	Xiphophorus_couchianus
ENSUAMG00000008403	-	62	80.247	ENSXCOG00000015127	-	87	80.247	Xiphophorus_couchianus
ENSUAMG00000008403	-	71	66.304	ENSXMAG00000028210	-	71	67.816	Xiphophorus_maculatus
ENSUAMG00000008403	-	74	72.917	ENSXMAG00000019180	SRSF11	54	80.488	Xiphophorus_maculatus