EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000008524 (Gene tree)
Gene ID: -
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 11081 bases
Position: chrLZNR01006712.1:35387-46467
Accession: 20155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000010371	RRM_1	PF00076.22	2.6e-35	1	2
ENSUAMP00000010371	RRM_1	PF00076.22	2.6e-35	2	2
ENSUAMP00000010375	RRM_1	PF00076.22	9e-26	1	2
ENSUAMP00000010375	RRM_1	PF00076.22	9e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000011654	RBM23-201	2582	-	ENSUAMP00000010371	446 (aa)	-	UPI0004DFE4E4
ENSUAMT00000011659	RBM23-202	1383	-	ENSUAMP00000010375	321 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000008524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000008524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000008524	RBM23	52	31.624	ENSUAMG00000009532	TIAL1	80	31.111
ENSUAMG00000008524	RBM23	98	56.716	ENSUAMG00000010443	RBM39	65	68.196
ENSUAMG00000008524	RBM23	50	31.818	ENSUAMG00000001289	PABPC4L	98	32.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000008524	RBM23	100	90.135	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSUAMG00000008524	RBM23	100	97.333	ENSAMEG00000007322	RBM23	100	97.333	Ailuropoda_melanoleuca
ENSUAMG00000008524	RBM23	72	83.180	ENSACAG00000001569	RBM23	68	83.591	Anolis_carolinensis
ENSUAMG00000008524	RBM23	98	74.441	ENSANAG00000033790	-	72	75.079	Aotus_nancymaae
ENSUAMG00000008524	RBM23	100	87.473	ENSBTAG00000038333	RBM23	100	87.689	Bos_taurus
ENSUAMG00000008524	RBM23	100	88.591	ENSCJAG00000008482	RBM23	100	85.906	Callithrix_jacchus
ENSUAMG00000008524	RBM23	100	87.991	ENSCAFG00000011217	RBM23	100	87.991	Canis_familiaris
ENSUAMG00000008524	RBM23	100	95.740	ENSCAFG00020007711	RBM23	100	94.843	Canis_lupus_dingo
ENSUAMG00000008524	RBM23	100	88.121	ENSCHIG00000025709	RBM23	100	87.257	Capra_hircus
ENSUAMG00000008524	RBM23	100	91.499	ENSTSYG00000014755	RBM23	100	95.620	Carlito_syrichta
ENSUAMG00000008524	RBM23	100	89.238	ENSCCAG00000025114	-	100	86.547	Cebus_capucinus
ENSUAMG00000008524	RBM23	100	74.888	ENSCCAG00000028584	-	100	79.197	Cebus_capucinus
ENSUAMG00000008524	RBM23	100	90.135	ENSCATG00000017832	RBM23	100	93.571	Cercocebus_atys
ENSUAMG00000008524	RBM23	100	89.509	ENSCSAG00000016213	RBM23	100	89.732	Chlorocebus_sabaeus
ENSUAMG00000008524	RBM23	56	96.835	ENSCHOG00000004460	-	51	96.835	Choloepus_hoffmanni
ENSUAMG00000008524	RBM23	100	69.507	ENSCPBG00000026096	RBM23	77	80.757	Chrysemys_picta_bellii
ENSUAMG00000008524	RBM23	76	92.962	ENSCANG00000001893	RBM23	83	93.548	Colobus_angolensis_palliatus
ENSUAMG00000008524	RBM23	100	89.238	ENSDNOG00000032457	RBM23	100	87.220	Dasypus_novemcinctus
ENSUAMG00000008524	RBM23	61	94.891	ENSDORG00000004926	-	100	94.891	Dipodomys_ordii
ENSUAMG00000008524	RBM23	70	76.667	ENSETEG00000017915	-	87	78.022	Echinops_telfairi
ENSUAMG00000008524	RBM23	96	92.807	ENSEASG00005011696	RBM23	95	90.233	Equus_asinus_asinus
ENSUAMG00000008524	RBM23	100	86.161	ENSECAG00000009910	RBM23	100	79.912	Equus_caballus
ENSUAMG00000008524	RBM23	100	85.906	ENSEEUG00000015560	RBM23	100	85.011	Erinaceus_europaeus
ENSUAMG00000008524	RBM23	100	95.291	ENSFCAG00000006632	RBM23	100	94.170	Felis_catus
ENSUAMG00000008524	RBM23	100	90.359	ENSGGOG00000015707	RBM23	100	90.135	Gorilla_gorilla
ENSUAMG00000008524	RBM23	100	80.493	ENSHGLG00100006114	RBM23	99	80.717	Heterocephalus_glaber_male
ENSUAMG00000008524	RBM23	61	95.255	ENSSTOG00000010354	RBM23	100	95.255	Ictidomys_tridecemlineatus
ENSUAMG00000008524	RBM23	100	85.235	ENSLAFG00000018567	RBM23	100	84.340	Loxodonta_africana
ENSUAMG00000008524	RBM23	100	90.179	ENSMFAG00000037595	RBM23	100	90.179	Macaca_fascicularis
ENSUAMG00000008524	RBM23	100	89.955	ENSMMUG00000018381	RBM23	100	88.839	Macaca_mulatta
ENSUAMG00000008524	RBM23	100	90.359	ENSMNEG00000042442	RBM23	100	89.910	Macaca_nemestrina
ENSUAMG00000008524	RBM23	100	81.111	ENSMLEG00000039954	RBM23	100	78.667	Mandrillus_leucophaeus
ENSUAMG00000008524	RBM23	100	90.828	ENSMICG00000006364	RBM23	100	94.526	Microcebus_murinus
ENSUAMG00000008524	RBM23	100	87.225	ENSMODG00000024448	RBM23	100	88.987	Monodelphis_domestica
ENSUAMG00000008524	RBM23	100	95.973	ENSMPUG00000007151	RBM23	100	95.973	Mustela_putorius_furo
ENSUAMG00000008524	RBM23	100	81.333	ENSMLUG00000012923	RBM23	100	83.111	Myotis_lucifugus
ENSUAMG00000008524	RBM23	100	90.423	ENSNLEG00000014792	RBM23	100	89.978	Nomascus_leucogenys
ENSUAMG00000008524	RBM23	54	97.080	ENSMEUG00000014548	-	60	97.080	Notamacropus_eugenii
ENSUAMG00000008524	RBM23	72	87.227	ENSOPRG00000001092	RBM23	100	85.426	Ochotona_princeps
ENSUAMG00000008524	RBM23	98	81.789	ENSOCUG00000002006	RBM23	100	86.830	Oryctolagus_cuniculus
ENSUAMG00000008524	RBM23	99	81.182	ENSOGAG00000014794	RBM23	100	78.541	Otolemur_garnettii
ENSUAMG00000008524	RBM23	100	87.257	ENSOARG00000019398	RBM23	100	86.393	Ovis_aries
ENSUAMG00000008524	RBM23	100	89.978	ENSPPAG00000037922	RBM23	100	89.310	Pan_paniscus
ENSUAMG00000008524	RBM23	100	95.067	ENSPPRG00000023344	RBM23	100	94.170	Panthera_pardus
ENSUAMG00000008524	RBM23	100	87.668	ENSPTIG00000007831	RBM23	100	89.462	Panthera_tigris_altaica
ENSUAMG00000008524	RBM23	100	89.978	ENSPTRG00000006151	RBM23	100	89.310	Pan_troglodytes
ENSUAMG00000008524	RBM23	97	86.009	ENSPANG00000001324	RBM23	100	94.585	Papio_anubis
ENSUAMG00000008524	RBM23	100	86.026	ENSPCIG00000027773	RBM23	100	87.118	Phascolarctos_cinereus
ENSUAMG00000008524	RBM23	100	85.874	ENSPPYG00000005649	RBM23	100	82.735	Pongo_abelii
ENSUAMG00000008524	RBM23	100	66.592	ENSPCAG00000006669	RBM23	74	75.710	Procavia_capensis
ENSUAMG00000008524	RBM23	100	91.723	ENSPCOG00000018564	RBM23	100	95.985	Propithecus_coquereli
ENSUAMG00000008524	RBM23	100	90.157	ENSPVAG00000013785	RBM23	100	89.038	Pteropus_vampyrus
ENSUAMG00000008524	RBM23	100	89.955	ENSRBIG00000039276	RBM23	100	89.955	Rhinopithecus_bieti
ENSUAMG00000008524	RBM23	100	89.955	ENSRROG00000044026	RBM23	100	89.955	Rhinopithecus_roxellana
ENSUAMG00000008524	RBM23	100	89.809	ENSSBOG00000023037	-	100	84.395	Saimiri_boliviensis_boliviensis
ENSUAMG00000008524	RBM23	96	67.209	ENSSBOG00000034977	-	73	74.667	Saimiri_boliviensis_boliviensis
ENSUAMG00000008524	RBM23	71	93.038	ENSSHAG00000012932	RBM23	100	85.153	Sarcophilus_harrisii
ENSUAMG00000008524	RBM23	100	90.179	ENSSARG00000005165	RBM23	100	89.062	Sorex_araneus
ENSUAMG00000008524	RBM23	72	81.481	ENSSPUG00000000489	RBM23	71	81.366	Sphenodon_punctatus
ENSUAMG00000008524	RBM23	100	84.410	ENSSSCG00000026700	RBM23	100	87.528	Sus_scrofa
ENSUAMG00000008524	RBM23	100	85.430	ENSTBEG00000011543	RBM23	100	85.872	Tupaia_belangeri
ENSUAMG00000008524	RBM23	100	87.248	ENSTTRG00000001500	RBM23	100	87.919	Tursiops_truncatus
ENSUAMG00000008524	RBM23	100	100.000	ENSUMAG00000014075	RBM23	100	100.000	Ursus_maritimus
ENSUAMG00000008524	RBM23	55	96.023	ENSVPAG00000000599	-	58	96.023	Vicugna_pacos
ENSUAMG00000008524	RBM23	100	96.637	ENSVVUG00000019815	RBM23	100	96.637	Vulpes_vulpes
ENSUAMG00000008524	RBM23	68	75.817	ENSXETG00000022623	rbm23	71	74.528	Xenopus_tropicalis