EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000008789 (Gene tree)
Gene ID: -
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 19500 bases
Position: chrLZNR01003063.1:216780-236279
Accession: 30813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000010706	RRM_1	PF00076.22	4.7e-25	1	2
ENSUAMP00000010706	RRM_1	PF00076.22	4.7e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000012030	TRNAU1AP-201	878	-	ENSUAMP00000010706	274 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000008789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000008789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000008789	TRNAU1AP	70	31.034	ENSUAMG00000024428	PABPC1	56	31.034
ENSUAMG00000008789	TRNAU1AP	64	32.240	ENSUAMG00000009532	TIAL1	86	32.240

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSG00000180098	TRNAU1AP	95	99.635	Homo_sapiens
ENSUAMG00000008789	TRNAU1AP	99	58.219	ENSAPOG00000007148	TRNAU1AP	98	58.219	Acanthochromis_polyacanthus
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSAMEG00000011367	TRNAU1AP	95	99.270	Ailuropoda_melanoleuca
ENSUAMG00000008789	TRNAU1AP	92	71.053	ENSACIG00000004161	trnau1apa	94	59.441	Amphilophus_citrinellus
ENSUAMG00000008789	TRNAU1AP	99	58.219	ENSAOCG00000008056	trnau1apa	94	58.219	Amphiprion_ocellaris
ENSUAMG00000008789	TRNAU1AP	99	58.219	ENSAPEG00000008868	trnau1apa	94	58.392	Amphiprion_percula
ENSUAMG00000008789	TRNAU1AP	99	58.000	ENSATEG00000012140	trnau1apa	95	56.000	Anabas_testudineus
ENSUAMG00000008789	TRNAU1AP	96	94.275	ENSAPLG00000002606	TRNAU1AP	96	94.275	Anas_platyrhynchos
ENSUAMG00000008789	TRNAU1AP	99	76.642	ENSACAG00000003995	-	95	76.642	Anolis_carolinensis
ENSUAMG00000008789	TRNAU1AP	70	52.083	ENSACAG00000004205	-	73	52.083	Anolis_carolinensis
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSANAG00000018976	TRNAU1AP	95	99.635	Aotus_nancymaae
ENSUAMG00000008789	TRNAU1AP	99	58.824	ENSACLG00000018515	trnau1apa	94	60.279	Astatotilapia_calliptera
ENSUAMG00000008789	TRNAU1AP	96	57.678	ENSAMXG00000013750	trnau1apa	87	57.678	Astyanax_mexicanus
ENSUAMG00000008789	TRNAU1AP	96	64.557	ENSAMXG00000029240	-	97	64.557	Astyanax_mexicanus
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSBTAG00000010393	TRNAU1AP	95	99.270	Bos_taurus
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSCJAG00000009717	TRNAU1AP	95	99.635	Callithrix_jacchus
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSCAFG00000011735	TRNAU1AP	95	99.270	Canis_familiaris
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSCAFG00020023584	TRNAU1AP	95	99.270	Canis_lupus_dingo
ENSUAMG00000008789	TRNAU1AP	100	98.905	ENSCHIG00000023215	TRNAU1AP	95	98.905	Capra_hircus
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSTSYG00000003506	TRNAU1AP	95	99.270	Carlito_syrichta
ENSUAMG00000008789	TRNAU1AP	100	98.905	ENSCPOG00000001925	TRNAU1AP	95	98.905	Cavia_porcellus
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSCCAG00000037506	TRNAU1AP	95	99.635	Cebus_capucinus
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSCATG00000044617	TRNAU1AP	95	99.270	Cercocebus_atys
ENSUAMG00000008789	TRNAU1AP	100	98.175	ENSCLAG00000008223	TRNAU1AP	95	98.175	Chinchilla_lanigera
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSCSAG00000001014	TRNAU1AP	95	99.270	Chlorocebus_sabaeus
ENSUAMG00000008789	TRNAU1AP	100	94.526	ENSCPBG00000000121	TRNAU1AP	100	94.526	Chrysemys_picta_bellii
ENSUAMG00000008789	TRNAU1AP	62	51.462	ENSCSAVG00000011781	-	90	51.462	Ciona_savignyi
ENSUAMG00000008789	TRNAU1AP	100	87.226	ENSCANG00000041949	TRNAU1AP	100	99.435	Colobus_angolensis_palliatus
ENSUAMG00000008789	TRNAU1AP	100	98.905	ENSCGRG00001004713	Trnau1ap	95	98.905	Cricetulus_griseus_chok1gshd
ENSUAMG00000008789	TRNAU1AP	100	98.905	ENSCGRG00000014532	Trnau1ap	95	98.905	Cricetulus_griseus_crigri
ENSUAMG00000008789	TRNAU1AP	98	58.131	ENSCSEG00000006663	trnau1apa	92	56.701	Cynoglossus_semilaevis
ENSUAMG00000008789	TRNAU1AP	96	60.507	ENSCVAG00000018069	trnau1apa	94	59.341	Cyprinodon_variegatus
ENSUAMG00000008789	TRNAU1AP	96	52.222	ENSDARG00000101323	trnau1apa	85	50.554	Danio_rerio
ENSUAMG00000008789	TRNAU1AP	66	80.000	ENSDNOG00000047959	-	91	80.571	Dasypus_novemcinctus
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSDNOG00000033009	TRNAU1AP	95	99.270	Dasypus_novemcinctus
ENSUAMG00000008789	TRNAU1AP	100	93.066	ENSDORG00000006349	Trnau1ap	94	99.541	Dipodomys_ordii
ENSUAMG00000008789	TRNAU1AP	89	94.286	ENSETEG00000012594	TRNAU1AP	100	94.286	Echinops_telfairi
ENSUAMG00000008789	TRNAU1AP	53	57.500	ENSEBUG00000006349	-	60	57.500	Eptatretus_burgeri
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSEASG00005010062	TRNAU1AP	95	99.635	Equus_asinus_asinus
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSECAG00000012980	TRNAU1AP	95	99.635	Equus_caballus
ENSUAMG00000008789	TRNAU1AP	97	62.681	ENSELUG00000017686	trnau1apa	94	62.319	Esox_lucius
ENSUAMG00000008789	TRNAU1AP	96	70.238	ENSELUG00000022790	-	95	64.557	Esox_lucius
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSFCAG00000013401	TRNAU1AP	95	99.635	Felis_catus
ENSUAMG00000008789	TRNAU1AP	100	93.431	ENSFALG00000001371	TRNAU1AP	100	93.431	Ficedula_albicollis
ENSUAMG00000008789	TRNAU1AP	100	98.175	ENSFDAG00000018599	TRNAU1AP	95	98.175	Fukomys_damarensis
ENSUAMG00000008789	TRNAU1AP	79	60.684	ENSFHEG00000018232	trnau1apa	86	56.452	Fundulus_heteroclitus
ENSUAMG00000008789	TRNAU1AP	96	53.091	ENSGMOG00000016508	trnau1apa	89	54.212	Gadus_morhua
ENSUAMG00000008789	TRNAU1AP	71	49.296	ENSGALG00000012721	C2H6orf52	95	44.788	Gallus_gallus
ENSUAMG00000008789	TRNAU1AP	100	92.701	ENSGALG00000001310	-	95	92.701	Gallus_gallus
ENSUAMG00000008789	TRNAU1AP	78	58.150	ENSGAFG00000004928	trnau1apa	86	59.031	Gambusia_affinis
ENSUAMG00000008789	TRNAU1AP	98	60.142	ENSGACG00000001443	trnau1apa	92	59.786	Gasterosteus_aculeatus
ENSUAMG00000008789	TRNAU1AP	100	94.891	ENSGAGG00000004940	TRNAU1AP	100	94.891	Gopherus_agassizii
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSGGOG00000003511	TRNAU1AP	95	99.635	Gorilla_gorilla
ENSUAMG00000008789	TRNAU1AP	99	58.305	ENSHBUG00000002510	trnau1apa	94	59.247	Haplochromis_burtoni
ENSUAMG00000008789	TRNAU1AP	100	98.175	ENSHGLG00000010380	TRNAU1AP	95	98.175	Heterocephalus_glaber_female
ENSUAMG00000008789	TRNAU1AP	99	98.519	ENSHGLG00100012699	TRNAU1AP	95	98.519	Heterocephalus_glaber_male
ENSUAMG00000008789	TRNAU1AP	100	57.192	ENSHCOG00000014770	trnau1apa	94	55.219	Hippocampus_comes
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSSTOG00000000079	TRNAU1AP	95	99.635	Ictidomys_tridecemlineatus
ENSUAMG00000008789	TRNAU1AP	100	98.540	ENSJJAG00000010128	Trnau1ap	95	98.540	Jaculus_jaculus
ENSUAMG00000008789	TRNAU1AP	96	60.432	ENSKMAG00000001230	trnau1apa	90	58.633	Kryptolebias_marmoratus
ENSUAMG00000008789	TRNAU1AP	96	60.638	ENSLBEG00000011683	trnau1apa	90	59.717	Labrus_bergylta
ENSUAMG00000008789	TRNAU1AP	100	71.533	ENSLACG00000005541	TRNAU1AP	95	71.533	Latimeria_chalumnae
ENSUAMG00000008789	TRNAU1AP	99	72.364	ENSLOCG00000004041	trnau1apa	95	71.273	Lepisosteus_oculatus
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSLAFG00000007628	TRNAU1AP	95	99.270	Loxodonta_africana
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSMFAG00000043751	TRNAU1AP	95	99.270	Macaca_fascicularis
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSMMUG00000006561	TRNAU1AP	95	99.270	Macaca_mulatta
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSMNEG00000044201	TRNAU1AP	95	99.270	Macaca_nemestrina
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSMLEG00000015649	TRNAU1AP	95	99.270	Mandrillus_leucophaeus
ENSUAMG00000008789	TRNAU1AP	99	58.784	ENSMAMG00000001247	trnau1apa	94	58.633	Mastacembelus_armatus
ENSUAMG00000008789	TRNAU1AP	99	58.824	ENSMZEG00005017722	trnau1apa	94	60.279	Maylandia_zebra
ENSUAMG00000008789	TRNAU1AP	100	92.701	ENSMGAG00000002105	TRNAU1AP	99	92.701	Meleagris_gallopavo
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSMICG00000008386	TRNAU1AP	100	98.870	Microcebus_murinus
ENSUAMG00000008789	TRNAU1AP	100	98.540	ENSMOCG00000011189	Trnau1ap	95	98.540	Microtus_ochrogaster
ENSUAMG00000008789	TRNAU1AP	95	58.238	ENSMMOG00000012107	trnau1apa	88	58.238	Mola_mola
ENSUAMG00000008789	TRNAU1AP	100	94.891	ENSMODG00000010927	TRNAU1AP	95	94.891	Monodelphis_domestica
ENSUAMG00000008789	TRNAU1AP	96	60.993	ENSMALG00000016778	trnau1apa	90	58.156	Monopterus_albus
ENSUAMG00000008789	TRNAU1AP	100	98.540	MGP_CAROLIEiJ_G0026563	Trnau1ap	98	100.000	Mus_caroli
ENSUAMG00000008789	TRNAU1AP	100	98.540	ENSMUSG00000028898	Trnau1ap	98	100.000	Mus_musculus
ENSUAMG00000008789	TRNAU1AP	100	98.905	MGP_PahariEiJ_G0028896	Trnau1ap	98	100.000	Mus_pahari
ENSUAMG00000008789	TRNAU1AP	100	98.175	MGP_SPRETEiJ_G0027544	Trnau1ap	98	100.000	Mus_spretus
ENSUAMG00000008789	TRNAU1AP	100	98.905	ENSMPUG00000015511	TRNAU1AP	95	98.905	Mustela_putorius_furo
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSMLUG00000012586	TRNAU1AP	95	99.270	Myotis_lucifugus
ENSUAMG00000008789	TRNAU1AP	100	97.080	ENSNGAG00000015881	Trnau1ap	95	97.080	Nannospalax_galili
ENSUAMG00000008789	TRNAU1AP	99	57.857	ENSNBRG00000001758	trnau1apa	94	57.857	Neolamprologus_brichardi
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSNLEG00000009822	TRNAU1AP	95	99.635	Nomascus_leucogenys
ENSUAMG00000008789	TRNAU1AP	100	93.796	ENSMEUG00000006117	TRNAU1AP	99	93.796	Notamacropus_eugenii
ENSUAMG00000008789	TRNAU1AP	69	98.182	ENSOPRG00000007084	-	65	98.182	Ochotona_princeps
ENSUAMG00000008789	TRNAU1AP	100	98.540	ENSODEG00000002970	TRNAU1AP	95	98.540	Octodon_degus
ENSUAMG00000008789	TRNAU1AP	82	59.414	ENSONIG00000004715	trnau1apa	94	59.664	Oreochromis_niloticus
ENSUAMG00000008789	TRNAU1AP	100	73.913	ENSOANG00000005325	-	95	73.913	Ornithorhynchus_anatinus
ENSUAMG00000008789	TRNAU1AP	100	76.364	ENSOCUG00000002353	-	95	76.364	Oryctolagus_cuniculus
ENSUAMG00000008789	TRNAU1AP	89	77.778	ENSOCUG00000006834	-	95	75.720	Oryctolagus_cuniculus
ENSUAMG00000008789	TRNAU1AP	100	97.445	ENSOCUG00000011704	-	95	97.445	Oryctolagus_cuniculus
ENSUAMG00000008789	TRNAU1AP	98	59.041	ENSORLG00000010428	trnau1apa	92	56.940	Oryzias_latipes
ENSUAMG00000008789	TRNAU1AP	98	58.156	ENSORLG00020000926	trnau1ap	92	56.940	Oryzias_latipes_hni
ENSUAMG00000008789	TRNAU1AP	98	58.156	ENSORLG00015009858	trnau1ap	92	56.940	Oryzias_latipes_hsok
ENSUAMG00000008789	TRNAU1AP	98	59.220	ENSOMEG00000007873	trnau1apa	92	56.228	Oryzias_melastigma
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSOGAG00000002274	TRNAU1AP	95	99.270	Otolemur_garnettii
ENSUAMG00000008789	TRNAU1AP	100	98.905	ENSOARG00000002843	TRNAU1AP	95	98.905	Ovis_aries
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSPPAG00000033927	TRNAU1AP	95	99.635	Pan_paniscus
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSPPRG00000004416	TRNAU1AP	95	99.635	Panthera_pardus
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSPTIG00000016677	TRNAU1AP	95	99.635	Panthera_tigris_altaica
ENSUAMG00000008789	TRNAU1AP	98	80.812	ENSPTRG00000000434	-	97	79.336	Pan_troglodytes
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSPANG00000016019	TRNAU1AP	95	99.270	Papio_anubis
ENSUAMG00000008789	TRNAU1AP	95	74.699	ENSPKIG00000022205	-	92	78.205	Paramormyrops_kingsleyae
ENSUAMG00000008789	TRNAU1AP	95	58.824	ENSPKIG00000015511	trnau1apa	89	56.985	Paramormyrops_kingsleyae
ENSUAMG00000008789	TRNAU1AP	100	94.891	ENSPSIG00000006864	TRNAU1AP	100	94.891	Pelodiscus_sinensis
ENSUAMG00000008789	TRNAU1AP	96	61.049	ENSPMGG00000023893	trnau1apa	89	59.774	Periophthalmus_magnuspinnatus
ENSUAMG00000008789	TRNAU1AP	100	98.540	ENSPEMG00000007877	Trnau1ap	95	98.540	Peromyscus_maniculatus_bairdii
ENSUAMG00000008789	TRNAU1AP	59	60.843	ENSPMAG00000000592	trnau1apa	91	60.843	Petromyzon_marinus
ENSUAMG00000008789	TRNAU1AP	77	62.264	ENSPMAG00000005934	trnau1apa	94	59.906	Petromyzon_marinus
ENSUAMG00000008789	TRNAU1AP	96	56.679	ENSPFOG00000008100	trnau1apa	90	57.401	Poecilia_formosa
ENSUAMG00000008789	TRNAU1AP	96	56.679	ENSPLAG00000010236	trnau1apa	93	57.401	Poecilia_latipinna
ENSUAMG00000008789	TRNAU1AP	96	58.555	ENSPMEG00000016387	trnau1apa	88	57.401	Poecilia_mexicana
ENSUAMG00000008789	TRNAU1AP	96	53.585	ENSPREG00000019821	trnau1apa	82	67.105	Poecilia_reticulata
ENSUAMG00000008789	TRNAU1AP	93	86.434	ENSPPYG00000001639	-	100	86.434	Pongo_abelii
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSPCOG00000027712	-	100	98.870	Propithecus_coquereli
ENSUAMG00000008789	TRNAU1AP	99	82.784	ENSPCOG00000023470	-	97	82.784	Propithecus_coquereli
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSPVAG00000017214	TRNAU1AP	95	99.635	Pteropus_vampyrus
ENSUAMG00000008789	TRNAU1AP	99	58.305	ENSPNYG00000010130	trnau1apa	94	59.247	Pundamilia_nyererei
ENSUAMG00000008789	TRNAU1AP	96	55.147	ENSPNAG00000024905	trnau1apa	87	54.307	Pygocentrus_nattereri
ENSUAMG00000008789	TRNAU1AP	94	89.922	ENSRNOG00000055344	Trnau1ap	88	89.922	Rattus_norvegicus
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSRBIG00000029083	TRNAU1AP	95	99.635	Rhinopithecus_bieti
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSRROG00000029128	TRNAU1AP	95	99.635	Rhinopithecus_roxellana
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSSBOG00000021299	TRNAU1AP	95	99.635	Saimiri_boliviensis_boliviensis
ENSUAMG00000008789	TRNAU1AP	100	94.161	ENSSHAG00000008108	TRNAU1AP	95	94.161	Sarcophilus_harrisii
ENSUAMG00000008789	TRNAU1AP	99	53.691	ENSSMAG00000020851	trnau1apa	95	57.143	Scophthalmus_maximus
ENSUAMG00000008789	TRNAU1AP	96	58.657	ENSSDUG00000011734	trnau1apa	90	57.244	Seriola_dumerili
ENSUAMG00000008789	TRNAU1AP	96	45.833	ENSSLDG00000012101	trnau1apa	88	50.000	Seriola_lalandi_dorsalis
ENSUAMG00000008789	TRNAU1AP	100	98.175	ENSSARG00000007536	TRNAU1AP	99	98.175	Sorex_araneus
ENSUAMG00000008789	TRNAU1AP	99	85.714	ENSSPUG00000010400	-	95	85.714	Sphenodon_punctatus
ENSUAMG00000008789	TRNAU1AP	64	82.386	ENSSPUG00000010415	-	100	82.386	Sphenodon_punctatus
ENSUAMG00000008789	TRNAU1AP	99	58.503	ENSSPAG00000005029	trnau1apa	94	57.770	Stegastes_partitus
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSSSCG00000030284	TRNAU1AP	100	99.435	Sus_scrofa
ENSUAMG00000008789	TRNAU1AP	100	93.796	ENSTGUG00000000735	-	99	93.796	Taeniopygia_guttata
ENSUAMG00000008789	TRNAU1AP	71	53.061	ENSTGUG00000005908	-	100	53.061	Taeniopygia_guttata
ENSUAMG00000008789	TRNAU1AP	99	58.966	ENSTRUG00000003352	trnau1apa	94	58.276	Takifugu_rubripes
ENSUAMG00000008789	TRNAU1AP	99	57.192	ENSTNIG00000006129	trnau1apa	94	57.192	Tetraodon_nigroviridis
ENSUAMG00000008789	TRNAU1AP	89	87.755	ENSTBEG00000008049	-	100	87.755	Tupaia_belangeri
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSTTRG00000001854	TRNAU1AP	95	99.270	Tursiops_truncatus
ENSUAMG00000008789	TRNAU1AP	100	99.635	ENSUMAG00000011068	TRNAU1AP	100	99.435	Ursus_maritimus
ENSUAMG00000008789	TRNAU1AP	89	99.592	ENSVPAG00000006778	TRNAU1AP	84	99.592	Vicugna_pacos
ENSUAMG00000008789	TRNAU1AP	100	99.270	ENSVVUG00000012518	TRNAU1AP	89	99.270	Vulpes_vulpes
ENSUAMG00000008789	TRNAU1AP	96	55.596	ENSXMAG00000017361	trnau1apa	90	57.401	Xiphophorus_maculatus