EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000008860 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 55765 bases
Position: chrLZNR01001028.1:117001-172765
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000010830	RRM_1	PF00076.22	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000012173	SCAF4-201	3751	-	ENSUAMP00000010830	1113 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000008860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000008860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000008860	SCAF4	100	94.587	ENSG00000156304	SCAF4	100	94.587	Homo_sapiens
ENSUAMG00000008860	SCAF4	74	95.892	ENSAMEG00000014987	SCAF4	100	95.892	Ailuropoda_melanoleuca
ENSUAMG00000008860	SCAF4	99	75.308	ENSAPLG00000002509	SCAF4	59	83.385	Anas_platyrhynchos
ENSUAMG00000008860	SCAF4	63	65.584	ENSACAG00000002569	SCAF4	52	84.756	Anolis_carolinensis
ENSUAMG00000008860	SCAF4	100	90.592	ENSANAG00000037494	SCAF4	100	90.679	Aotus_nancymaae
ENSUAMG00000008860	SCAF4	93	51.244	ENSAMXG00000008585	scaf4a	60	62.840	Astyanax_mexicanus
ENSUAMG00000008860	SCAF4	100	92.388	ENSBTAG00000018855	SCAF4	100	92.388	Bos_taurus
ENSUAMG00000008860	SCAF4	100	90.688	ENSCJAG00000008993	SCAF4	99	92.695	Callithrix_jacchus
ENSUAMG00000008860	SCAF4	99	96.536	ENSCAFG00000008863	SCAF4	99	96.536	Canis_familiaris
ENSUAMG00000008860	SCAF4	99	93.310	ENSCAFG00020026019	SCAF4	100	96.208	Canis_lupus_dingo
ENSUAMG00000008860	SCAF4	100	91.696	ENSCHIG00000008385	SCAF4	100	91.783	Capra_hircus
ENSUAMG00000008860	SCAF4	91	91.686	ENSTSYG00000011344	SCAF4	98	91.647	Carlito_syrichta
ENSUAMG00000008860	SCAF4	100	89.974	ENSCPOG00000012443	SCAF4	100	90.413	Cavia_porcellus
ENSUAMG00000008860	SCAF4	100	91.004	ENSCCAG00000033727	SCAF4	100	91.179	Cebus_capucinus
ENSUAMG00000008860	SCAF4	100	91.059	ENSCATG00000030379	SCAF4	100	91.233	Cercocebus_atys
ENSUAMG00000008860	SCAF4	99	88.097	ENSCLAG00000006298	SCAF4	100	87.576	Chinchilla_lanigera
ENSUAMG00000008860	SCAF4	100	90.964	ENSCSAG00000009438	SCAF4	100	90.791	Chlorocebus_sabaeus
ENSUAMG00000008860	SCAF4	100	91.361	ENSCANG00000029847	SCAF4	100	91.623	Colobus_angolensis_palliatus
ENSUAMG00000008860	SCAF4	66	86.753	ENSCGRG00001020821	Scaf4	65	86.883	Cricetulus_griseus_chok1gshd
ENSUAMG00000008860	SCAF4	67	85.935	ENSCGRG00000014360	Scaf4	100	79.351	Cricetulus_griseus_crigri
ENSUAMG00000008860	SCAF4	79	53.493	ENSCSEG00000019549	scaf4a	51	56.151	Cynoglossus_semilaevis
ENSUAMG00000008860	SCAF4	88	50.245	ENSDARG00000077093	scaf4a	56	60.796	Danio_rerio
ENSUAMG00000008860	SCAF4	100	89.386	ENSDNOG00000019014	SCAF4	94	89.561	Dasypus_novemcinctus
ENSUAMG00000008860	SCAF4	96	78.818	ENSETEG00000000583	SCAF4	99	78.636	Echinops_telfairi
ENSUAMG00000008860	SCAF4	100	95.351	ENSEASG00005007756	SCAF4	100	95.351	Equus_asinus_asinus
ENSUAMG00000008860	SCAF4	100	95.180	ENSECAG00000014248	SCAF4	100	95.180	Equus_caballus
ENSUAMG00000008860	SCAF4	58	52.862	ENSELUG00000002779	SCAF8	61	68.841	Esox_lucius
ENSUAMG00000008860	SCAF4	100	95.626	ENSFCAG00000002228	SCAF4	100	95.626	Felis_catus
ENSUAMG00000008860	SCAF4	99	86.776	ENSFDAG00000017780	SCAF4	100	87.035	Fukomys_damarensis
ENSUAMG00000008860	SCAF4	60	59.058	ENSFHEG00000007634	scaf4b	52	78.417	Fundulus_heteroclitus
ENSUAMG00000008860	SCAF4	100	76.512	ENSGALG00000033965	SCAF4	59	83.614	Gallus_gallus
ENSUAMG00000008860	SCAF4	93	90.358	ENSGGOG00000015557	SCAF4	100	93.598	Gorilla_gorilla
ENSUAMG00000008860	SCAF4	100	88.985	ENSHGLG00000010582	SCAF4	100	89.332	Heterocephalus_glaber_female
ENSUAMG00000008860	SCAF4	99	88.850	ENSHGLG00100009441	SCAF4	100	89.289	Heterocephalus_glaber_male
ENSUAMG00000008860	SCAF4	99	85.247	ENSSTOG00000004450	SCAF4	100	84.982	Ictidomys_tridecemlineatus
ENSUAMG00000008860	SCAF4	99	86.926	ENSJJAG00000019447	Scaf4	99	87.279	Jaculus_jaculus
ENSUAMG00000008860	SCAF4	61	60.000	ENSKMAG00000005742	scaf4b	54	73.885	Kryptolebias_marmoratus
ENSUAMG00000008860	SCAF4	96	60.866	ENSLACG00000013913	SCAF4	59	68.553	Latimeria_chalumnae
ENSUAMG00000008860	SCAF4	95	57.573	ENSLOCG00000009162	scaf4a	59	66.964	Lepisosteus_oculatus
ENSUAMG00000008860	SCAF4	99	91.615	ENSLAFG00000010710	SCAF4	100	91.792	Loxodonta_africana
ENSUAMG00000008860	SCAF4	100	90.649	ENSMFAG00000037668	SCAF4	100	90.736	Macaca_fascicularis
ENSUAMG00000008860	SCAF4	100	90.563	ENSMMUG00000001712	SCAF4	100	90.649	Macaca_mulatta
ENSUAMG00000008860	SCAF4	100	90.484	ENSMNEG00000032966	SCAF4	100	90.398	Macaca_nemestrina
ENSUAMG00000008860	SCAF4	99	90.639	ENSMLEG00000039674	SCAF4	100	91.076	Mandrillus_leucophaeus
ENSUAMG00000008860	SCAF4	99	76.237	ENSMGAG00000014515	SCAF4	59	83.540	Meleagris_gallopavo
ENSUAMG00000008860	SCAF4	99	85.702	ENSMAUG00000013307	Scaf4	100	86.158	Mesocricetus_auratus
ENSUAMG00000008860	SCAF4	100	91.944	ENSMICG00000005256	SCAF4	100	91.681	Microcebus_murinus
ENSUAMG00000008860	SCAF4	98	88.079	ENSMOCG00000012087	Scaf4	99	84.917	Microtus_ochrogaster
ENSUAMG00000008860	SCAF4	63	88.051	ENSMODG00000021040	SCAF4	100	82.968	Monodelphis_domestica
ENSUAMG00000008860	SCAF4	100	86.008	MGP_CAROLIEiJ_G0020944	Scaf4	95	86.340	Mus_caroli
ENSUAMG00000008860	SCAF4	100	85.419	ENSMUSG00000022983	Scaf4	95	86.010	Mus_musculus
ENSUAMG00000008860	SCAF4	98	85.829	MGP_PahariEiJ_G0016649	Scaf4	100	82.178	Mus_pahari
ENSUAMG00000008860	SCAF4	100	81.183	MGP_SPRETEiJ_G0021850	Scaf4	100	83.290	Mus_spretus
ENSUAMG00000008860	SCAF4	100	93.674	ENSMPUG00000001078	SCAF4	100	93.674	Mustela_putorius_furo
ENSUAMG00000008860	SCAF4	99	76.406	ENSMLUG00000011472	SCAF4	79	81.630	Myotis_lucifugus
ENSUAMG00000008860	SCAF4	99	87.413	ENSNGAG00000005214	Scaf4	99	88.421	Nannospalax_galili
ENSUAMG00000008860	SCAF4	100	92.515	ENSNLEG00000003569	SCAF4	100	92.515	Nomascus_leucogenys
ENSUAMG00000008860	SCAF4	84	82.500	ENSOPRG00000007016	SCAF4	77	85.377	Ochotona_princeps
ENSUAMG00000008860	SCAF4	100	86.461	ENSODEG00000002718	SCAF4	100	86.290	Octodon_degus
ENSUAMG00000008860	SCAF4	71	59.635	ENSONIG00000004687	scaf4a	51	74.390	Oreochromis_niloticus
ENSUAMG00000008860	SCAF4	100	90.468	ENSOCUG00000008336	SCAF4	100	90.203	Oryctolagus_cuniculus
ENSUAMG00000008860	SCAF4	99	80.381	ENSOGAG00000014653	SCAF4	94	92.035	Otolemur_garnettii
ENSUAMG00000008860	SCAF4	99	91.182	ENSOARG00000013894	SCAF4	99	90.893	Ovis_aries
ENSUAMG00000008860	SCAF4	100	92.689	ENSPPAG00000028535	SCAF4	100	92.689	Pan_paniscus
ENSUAMG00000008860	SCAF4	99	95.668	ENSPPRG00000000635	SCAF4	100	95.668	Panthera_pardus
ENSUAMG00000008860	SCAF4	99	92.192	ENSPTIG00000021578	SCAF4	99	88.344	Panthera_tigris_altaica
ENSUAMG00000008860	SCAF4	100	92.689	ENSPTRG00000013848	SCAF4	100	92.689	Pan_troglodytes
ENSUAMG00000008860	SCAF4	100	92.135	ENSPANG00000017332	SCAF4	100	92.135	Papio_anubis
ENSUAMG00000008860	SCAF4	66	63.852	ENSPKIG00000022408	scaf4a	90	66.567	Paramormyrops_kingsleyae
ENSUAMG00000008860	SCAF4	99	76.216	ENSPSIG00000014242	SCAF4	57	84.137	Pelodiscus_sinensis
ENSUAMG00000008860	SCAF4	99	85.960	ENSPCIG00000028183	SCAF4	91	84.783	Phascolarctos_cinereus
ENSUAMG00000008860	SCAF4	55	56.318	ENSPREG00000013510	scaf4b	58	66.327	Poecilia_reticulata
ENSUAMG00000008860	SCAF4	100	92.522	ENSPPYG00000011355	SCAF4	100	92.522	Pongo_abelii
ENSUAMG00000008860	SCAF4	100	91.391	ENSPCOG00000018710	SCAF4	100	91.217	Propithecus_coquereli
ENSUAMG00000008860	SCAF4	100	94.019	ENSPVAG00000005220	SCAF4	100	94.019	Pteropus_vampyrus
ENSUAMG00000008860	SCAF4	50	61.624	ENSPNYG00000010526	scaf4b	54	75.974	Pundamilia_nyererei
ENSUAMG00000008860	SCAF4	76	58.708	ENSPNAG00000016892	scaf4a	60	64.072	Pygocentrus_nattereri
ENSUAMG00000008860	SCAF4	98	86.096	ENSRNOG00000002104	Scaf4	95	83.968	Rattus_norvegicus
ENSUAMG00000008860	SCAF4	99	89.673	ENSRBIG00000040007	SCAF4	61	90.411	Rhinopithecus_bieti
ENSUAMG00000008860	SCAF4	100	91.972	ENSRROG00000029488	SCAF4	100	91.965	Rhinopithecus_roxellana
ENSUAMG00000008860	SCAF4	63	86.486	ENSSHAG00000001581	SCAF4	100	82.058	Sarcophilus_harrisii
ENSUAMG00000008860	SCAF4	87	48.077	ENSSFOG00015006338	scaf4a	54	58.333	Scleropages_formosus
ENSUAMG00000008860	SCAF4	65	60.000	ENSSMAG00000003738	scaf4b	51	78.417	Scophthalmus_maximus
ENSUAMG00000008860	SCAF4	100	87.837	ENSSARG00000009994	SCAF4	100	87.315	Sorex_araneus
ENSUAMG00000008860	SCAF4	100	93.744	ENSSSCG00000021023	SCAF4	100	93.656	Sus_scrofa
ENSUAMG00000008860	SCAF4	74	70.270	ENSTGUG00000013464	SCAF4	57	85.050	Taeniopygia_guttata
ENSUAMG00000008860	SCAF4	99	92.635	ENSTTRG00000010963	SCAF4	100	92.369	Tursiops_truncatus
ENSUAMG00000008860	SCAF4	99	94.648	ENSUMAG00000016962	SCAF4	100	94.648	Ursus_maritimus
ENSUAMG00000008860	SCAF4	99	96.610	ENSVVUG00000002953	SCAF4	100	96.610	Vulpes_vulpes
ENSUAMG00000008860	SCAF4	99	57.998	ENSXETG00000007351	scaf4	63	62.625	Xenopus_tropicalis