EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000009305 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 23638 bases
Position: chrLZNR01008265.1:369-24006
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000011472	NMD3	PF04981.13	5.1e-80	1	1
ENSUAMP00000011473	NMD3	PF04981.13	5.1e-80	1	1
ENSUAMP00000011421	NMD3	PF04981.13	5.7e-80	1	1
ENSUAMP00000011420	NMD3	PF04981.13	5.9e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000012895	-	1660	-	ENSUAMP00000011472	404 (aa)	-	-
ENSUAMT00000012840	-	1287	-	ENSUAMP00000011420	428 (aa)	-	-
ENSUAMT00000012841	-	1269	-	ENSUAMP00000011421	422 (aa)	-	-
ENSUAMT00000012896	-	2017	-	ENSUAMP00000011473	404 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000009305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000009305's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000009305	-	99	96.517	ENSG00000169251	NMD3	100	96.789	Homo_sapiens
ENSUAMG00000009305	-	99	77.612	ENSAPOG00000022912	nmd3	82	76.399	Acanthochromis_polyacanthus
ENSUAMG00000009305	-	99	99.007	ENSAMEG00000001584	NMD3	84	95.283	Ailuropoda_melanoleuca
ENSUAMG00000009305	-	99	71.891	ENSACIG00000015196	nmd3	81	70.803	Amphilophus_citrinellus
ENSUAMG00000009305	-	99	77.363	ENSAOCG00000009086	nmd3	82	76.156	Amphiprion_ocellaris
ENSUAMG00000009305	-	99	77.363	ENSAPEG00000000329	nmd3	82	76.156	Amphiprion_percula
ENSUAMG00000009305	-	99	77.612	ENSATEG00000014351	nmd3	80	77.612	Anabas_testudineus
ENSUAMG00000009305	-	99	76.866	ENSAPLG00000014786	NMD3	80	76.866	Anas_platyrhynchos
ENSUAMG00000009305	-	99	82.090	ENSACAG00000007349	NMD3	82	80.779	Anolis_carolinensis
ENSUAMG00000009305	-	99	95.771	ENSANAG00000026434	NMD3	81	95.771	Aotus_nancymaae
ENSUAMG00000009305	-	99	78.607	ENSACLG00000015520	nmd3	82	77.372	Astatotilapia_calliptera
ENSUAMG00000009305	-	99	78.109	ENSAMXG00000014415	nmd3	80	78.109	Astyanax_mexicanus
ENSUAMG00000009305	-	99	94.527	ENSBTAG00000016228	NMD3	80	94.527	Bos_taurus
ENSUAMG00000009305	-	97	53.807	WBGene00012030	T25G3.3	78	54.271	Caenorhabditis_elegans
ENSUAMG00000009305	-	99	95.274	ENSCJAG00000002900	NMD3	79	95.274	Callithrix_jacchus
ENSUAMG00000009305	-	99	96.020	ENSCAFG00000014352	NMD3	82	92.435	Canis_familiaris
ENSUAMG00000009305	-	99	96.517	ENSCAFG00020021145	NMD3	84	92.908	Canis_lupus_dingo
ENSUAMG00000009305	-	99	95.274	ENSCHIG00000016015	NMD3	80	95.274	Capra_hircus
ENSUAMG00000009305	-	99	95.522	ENSTSYG00000002155	NMD3	80	95.522	Carlito_syrichta
ENSUAMG00000009305	-	90	94.521	ENSCAPG00000017861	NMD3	85	94.521	Cavia_aperea
ENSUAMG00000009305	-	99	95.274	ENSCPOG00000005953	NMD3	86	95.274	Cavia_porcellus
ENSUAMG00000009305	-	99	95.771	ENSCCAG00000037460	NMD3	80	95.771	Cebus_capucinus
ENSUAMG00000009305	-	99	96.766	ENSCATG00000030022	NMD3	80	96.766	Cercocebus_atys
ENSUAMG00000009305	-	99	94.776	ENSCLAG00000003155	NMD3	100	86.842	Chinchilla_lanigera
ENSUAMG00000009305	-	99	96.766	ENSCSAG00000012333	NMD3	80	96.766	Chlorocebus_sabaeus
ENSUAMG00000009305	-	75	93.443	ENSCHOG00000001240	NMD3	60	93.443	Choloepus_hoffmanni
ENSUAMG00000009305	-	99	82.836	ENSCPBG00000018318	NMD3	80	82.836	Chrysemys_picta_bellii
ENSUAMG00000009305	-	97	56.853	ENSCING00000002129	-	78	56.853	Ciona_intestinalis
ENSUAMG00000009305	-	86	56.447	ENSCSAVG00000001120	-	78	56.447	Ciona_savignyi
ENSUAMG00000009305	-	99	90.050	ENSCANG00000042939	NMD3	75	90.050	Colobus_angolensis_palliatus
ENSUAMG00000009305	-	99	76.119	ENSCGRG00001001792	Nmd3	77	76.119	Cricetulus_griseus_chok1gshd
ENSUAMG00000009305	-	96	95.361	ENSCGRG00000007947	Nmd3	78	95.361	Cricetulus_griseus_crigri
ENSUAMG00000009305	-	99	76.617	ENSCSEG00000017954	nmd3	82	75.426	Cynoglossus_semilaevis
ENSUAMG00000009305	-	94	78.100	ENSCVAG00000004672	nmd3	80	78.100	Cyprinodon_variegatus
ENSUAMG00000009305	-	99	76.866	ENSDARG00000015676	nmd3	80	76.866	Danio_rerio
ENSUAMG00000009305	-	99	94.030	ENSDNOG00000045222	NMD3	80	94.030	Dasypus_novemcinctus
ENSUAMG00000009305	-	93	93.103	ENSDORG00000005716	Nmd3	100	86.842	Dipodomys_ordii
ENSUAMG00000009305	-	96	55.754	FBgn0023542	Nmd3	77	55.087	Drosophila_melanogaster
ENSUAMG00000009305	-	99	79.353	ENSETEG00000003168	NMD3	80	79.353	Echinops_telfairi
ENSUAMG00000009305	-	86	61.671	ENSEBUG00000014316	nmd3	76	61.671	Eptatretus_burgeri
ENSUAMG00000009305	-	99	96.766	ENSEASG00005018672	NMD3	80	96.766	Equus_asinus_asinus
ENSUAMG00000009305	-	99	96.766	ENSECAG00000000188	NMD3	79	96.766	Equus_caballus
ENSUAMG00000009305	-	96	65.116	ENSEEUG00000010642	-	82	65.116	Erinaceus_europaeus
ENSUAMG00000009305	-	99	74.627	ENSELUG00000024123	nmd3	82	73.479	Esox_lucius
ENSUAMG00000009305	-	99	97.761	ENSFCAG00000022867	NMD3	84	94.090	Felis_catus
ENSUAMG00000009305	-	92	81.452	ENSFALG00000008711	NMD3	80	80.052	Ficedula_albicollis
ENSUAMG00000009305	-	96	80.928	ENSFDAG00000012197	-	88	79.849	Fukomys_damarensis
ENSUAMG00000009305	-	99	95.025	ENSFDAG00000013724	-	80	95.025	Fukomys_damarensis
ENSUAMG00000009305	-	99	76.119	ENSFHEG00000000415	nmd3	82	74.939	Fundulus_heteroclitus
ENSUAMG00000009305	-	96	76.744	ENSGMOG00000009675	nmd3	81	75.505	Gadus_morhua
ENSUAMG00000009305	-	99	80.100	ENSGALG00000009533	NMD3	80	80.100	Gallus_gallus
ENSUAMG00000009305	-	99	76.866	ENSGAFG00000012798	nmd3	78	75.669	Gambusia_affinis
ENSUAMG00000009305	-	99	76.617	ENSGACG00000010028	nmd3	82	75.426	Gasterosteus_aculeatus
ENSUAMG00000009305	-	99	82.587	ENSGAGG00000006556	NMD3	82	81.509	Gopherus_agassizii
ENSUAMG00000009305	-	98	80.808	ENSGGOG00000028590	-	82	79.798	Gorilla_gorilla
ENSUAMG00000009305	-	99	96.766	ENSGGOG00000007157	NMD3	80	96.766	Gorilla_gorilla
ENSUAMG00000009305	-	99	78.607	ENSHBUG00000001781	nmd3	82	77.372	Haplochromis_burtoni
ENSUAMG00000009305	-	99	74.129	ENSHGLG00000010477	-	80	74.129	Heterocephalus_glaber_female
ENSUAMG00000009305	-	99	94.279	ENSHGLG00000014451	-	80	94.279	Heterocephalus_glaber_female
ENSUAMG00000009305	-	99	74.627	ENSHGLG00100001042	-	80	74.627	Heterocephalus_glaber_male
ENSUAMG00000009305	-	99	94.279	ENSHGLG00100006613	-	80	94.279	Heterocephalus_glaber_male
ENSUAMG00000009305	-	99	77.861	ENSHCOG00000004292	nmd3	74	77.861	Hippocampus_comes
ENSUAMG00000009305	-	99	78.109	ENSIPUG00000005073	nmd3	84	75.177	Ictalurus_punctatus
ENSUAMG00000009305	-	99	96.269	ENSSTOG00000001899	NMD3	80	96.269	Ictidomys_tridecemlineatus
ENSUAMG00000009305	-	96	94.832	ENSJJAG00000019759	Nmd3	79	94.832	Jaculus_jaculus
ENSUAMG00000009305	-	99	78.109	ENSKMAG00000020427	nmd3	82	76.886	Kryptolebias_marmoratus
ENSUAMG00000009305	-	99	77.861	ENSLBEG00000022216	nmd3	84	76.642	Labrus_bergylta
ENSUAMG00000009305	-	99	78.856	ENSLACG00000005731	NMD3	95	76.794	Latimeria_chalumnae
ENSUAMG00000009305	-	99	79.353	ENSLOCG00000003561	nmd3	80	79.353	Lepisosteus_oculatus
ENSUAMG00000009305	-	99	94.045	ENSLAFG00000007231	NMD3	82	92.718	Loxodonta_africana
ENSUAMG00000009305	-	99	96.766	ENSMFAG00000040934	NMD3	80	96.766	Macaca_fascicularis
ENSUAMG00000009305	-	99	96.766	ENSMMUG00000009564	NMD3	76	96.766	Macaca_mulatta
ENSUAMG00000009305	-	99	96.766	ENSMNEG00000034626	NMD3	80	96.766	Macaca_nemestrina
ENSUAMG00000009305	-	85	95.614	ENSMLEG00000002741	NMD3	77	95.614	Mandrillus_leucophaeus
ENSUAMG00000009305	-	99	77.363	ENSMAMG00000012427	nmd3	82	76.156	Mastacembelus_armatus
ENSUAMG00000009305	-	99	78.607	ENSMZEG00005016888	nmd3	82	77.372	Maylandia_zebra
ENSUAMG00000009305	-	99	80.348	ENSMGAG00000010498	NMD3	80	80.348	Meleagris_gallopavo
ENSUAMG00000009305	-	99	95.274	ENSMAUG00000000633	Nmd3	80	95.274	Mesocricetus_auratus
ENSUAMG00000009305	-	99	96.020	ENSMICG00000049196	NMD3	80	96.020	Microcebus_murinus
ENSUAMG00000009305	-	99	93.766	ENSMOCG00000005180	Nmd3	80	93.766	Microtus_ochrogaster
ENSUAMG00000009305	-	99	77.171	ENSMMOG00000012765	nmd3	80	77.171	Mola_mola
ENSUAMG00000009305	-	84	75.802	ENSMODG00000016296	NMD3	79	68.370	Monodelphis_domestica
ENSUAMG00000009305	-	99	78.607	ENSMALG00000009256	nmd3	82	77.372	Monopterus_albus
ENSUAMG00000009305	-	99	95.025	MGP_CAROLIEiJ_G0025069	Nmd3	100	88.158	Mus_caroli
ENSUAMG00000009305	-	99	94.527	ENSMUSG00000027787	Nmd3	100	88.158	Mus_musculus
ENSUAMG00000009305	-	99	94.279	MGP_PahariEiJ_G0026512	Nmd3	100	89.474	Mus_pahari
ENSUAMG00000009305	-	99	94.776	MGP_SPRETEiJ_G0026011	Nmd3	100	88.158	Mus_spretus
ENSUAMG00000009305	-	99	98.010	ENSMPUG00000002955	NMD3	84	94.326	Mustela_putorius_furo
ENSUAMG00000009305	-	96	90.000	ENSMLUG00000000701	NMD3	77	90.000	Myotis_lucifugus
ENSUAMG00000009305	-	99	96.269	ENSNGAG00000012307	Nmd3	80	96.269	Nannospalax_galili
ENSUAMG00000009305	-	99	78.607	ENSNBRG00000003324	nmd3	82	77.372	Neolamprologus_brichardi
ENSUAMG00000009305	-	99	97.015	ENSNLEG00000004655	NMD3	80	97.015	Nomascus_leucogenys
ENSUAMG00000009305	-	74	58.730	ENSOPRG00000007690	-	60	58.730	Ochotona_princeps
ENSUAMG00000009305	-	99	95.025	ENSODEG00000006270	NMD3	80	95.025	Octodon_degus
ENSUAMG00000009305	-	99	79.353	ENSONIG00000003643	nmd3	82	78.102	Oreochromis_niloticus
ENSUAMG00000009305	-	99	97.264	ENSOCUG00000017454	NMD3	80	97.264	Oryctolagus_cuniculus
ENSUAMG00000009305	-	99	76.617	ENSORLG00000006279	nmd3	82	75.426	Oryzias_latipes
ENSUAMG00000009305	-	99	76.368	ENSORLG00020003843	nmd3	82	75.182	Oryzias_latipes_hni
ENSUAMG00000009305	-	99	76.119	ENSORLG00015006379	nmd3	82	74.939	Oryzias_latipes_hsok
ENSUAMG00000009305	-	99	78.109	ENSOMEG00000012144	nmd3	82	76.886	Oryzias_melastigma
ENSUAMG00000009305	-	99	94.776	ENSOGAG00000014910	NMD3	82	93.187	Otolemur_garnettii
ENSUAMG00000009305	-	99	94.789	ENSOARG00000001883	NMD3	80	93.204	Ovis_aries
ENSUAMG00000009305	-	99	96.766	ENSPPAG00000043829	NMD3	80	96.766	Pan_paniscus
ENSUAMG00000009305	-	99	98.010	ENSPPRG00000000724	NMD3	83	94.326	Panthera_pardus
ENSUAMG00000009305	-	99	97.264	ENSPTIG00000016761	NMD3	84	93.617	Panthera_tigris_altaica
ENSUAMG00000009305	-	99	96.517	ENSPTRG00000015586	NMD3	80	96.517	Pan_troglodytes
ENSUAMG00000009305	-	99	96.766	ENSPANG00000006665	NMD3	76	96.766	Papio_anubis
ENSUAMG00000009305	-	99	77.363	ENSPKIG00000009928	nmd3	82	76.156	Paramormyrops_kingsleyae
ENSUAMG00000009305	-	99	83.085	ENSPSIG00000007591	NMD3	80	83.085	Pelodiscus_sinensis
ENSUAMG00000009305	-	99	72.637	ENSPMGG00000014015	nmd3	79	72.637	Periophthalmus_magnuspinnatus
ENSUAMG00000009305	-	99	95.274	ENSPEMG00000021880	Nmd3	80	95.274	Peromyscus_maniculatus_bairdii
ENSUAMG00000009305	-	99	83.085	ENSPCIG00000020869	NMD3	87	83.085	Phascolarctos_cinereus
ENSUAMG00000009305	-	99	77.612	ENSPFOG00000012103	nmd3	82	76.399	Poecilia_formosa
ENSUAMG00000009305	-	99	77.861	ENSPLAG00000008087	nmd3	82	76.642	Poecilia_latipinna
ENSUAMG00000009305	-	99	77.612	ENSPMEG00000008506	nmd3	82	76.399	Poecilia_mexicana
ENSUAMG00000009305	-	99	77.861	ENSPREG00000001848	nmd3	82	76.642	Poecilia_reticulata
ENSUAMG00000009305	-	99	96.766	ENSPPYG00000014263	NMD3	80	96.766	Pongo_abelii
ENSUAMG00000009305	-	99	80.100	ENSPCAG00000009851	NMD3	89	78.589	Procavia_capensis
ENSUAMG00000009305	-	81	97.479	ENSPVAG00000003301	NMD3	65	97.479	Pteropus_vampyrus
ENSUAMG00000009305	-	99	78.358	ENSPNYG00000006778	nmd3	82	77.129	Pundamilia_nyererei
ENSUAMG00000009305	-	99	78.109	ENSPNAG00000009442	nmd3	84	75.414	Pygocentrus_nattereri
ENSUAMG00000009305	-	99	94.279	ENSRNOG00000009310	Nmd3	80	94.279	Rattus_norvegicus
ENSUAMG00000009305	-	99	90.796	ENSRBIG00000040379	NMD3	79	90.796	Rhinopithecus_bieti
ENSUAMG00000009305	-	99	96.517	ENSRROG00000036181	NMD3	80	96.517	Rhinopithecus_roxellana
ENSUAMG00000009305	-	96	47.179	YHR170W	NMD3	73	47.179	Saccharomyces_cerevisiae
ENSUAMG00000009305	-	99	94.724	ENSSBOG00000024021	NMD3	80	93.797	Saimiri_boliviensis_boliviensis
ENSUAMG00000009305	-	99	78.818	ENSSHAG00000016044	NMD3	82	77.590	Sarcophilus_harrisii
ENSUAMG00000009305	-	99	76.866	ENSSFOG00015003609	nmd3	80	76.866	Scleropages_formosus
ENSUAMG00000009305	-	99	75.373	ENSSMAG00000012887	nmd3	82	74.209	Scophthalmus_maximus
ENSUAMG00000009305	-	99	77.861	ENSSDUG00000023721	nmd3	82	76.642	Seriola_dumerili
ENSUAMG00000009305	-	99	77.861	ENSSLDG00000006565	nmd3	82	76.642	Seriola_lalandi_dorsalis
ENSUAMG00000009305	-	96	94.574	ENSSARG00000010402	NMD3	79	94.574	Sorex_araneus
ENSUAMG00000009305	-	99	81.095	ENSSPUG00000018791	NMD3	81	81.095	Sphenodon_punctatus
ENSUAMG00000009305	-	99	77.612	ENSSPAG00000014328	nmd3	80	77.612	Stegastes_partitus
ENSUAMG00000009305	-	99	95.522	ENSSSCG00000022952	NMD3	84	91.962	Sus_scrofa
ENSUAMG00000009305	-	89	78.453	ENSTGUG00000015141	-	78	78.453	Taeniopygia_guttata
ENSUAMG00000009305	-	99	79.602	ENSTGUG00000011140	-	80	79.602	Taeniopygia_guttata
ENSUAMG00000009305	-	99	76.617	ENSTRUG00000005958	nmd3	80	76.617	Takifugu_rubripes
ENSUAMG00000009305	-	99	70.324	ENSTBEG00000011783	-	80	70.324	Tupaia_belangeri
ENSUAMG00000009305	-	99	88.557	ENSTTRG00000012938	NMD3	80	88.557	Tursiops_truncatus
ENSUAMG00000009305	-	99	99.751	ENSUMAG00000011070	NMD3	85	95.981	Ursus_maritimus
ENSUAMG00000009305	-	99	95.522	ENSVPAG00000008779	NMD3	80	95.522	Vicugna_pacos
ENSUAMG00000009305	-	99	97.512	ENSVVUG00000023055	NMD3	85	93.853	Vulpes_vulpes
ENSUAMG00000009305	-	99	81.592	ENSXETG00000027727	nmd3	80	81.592	Xenopus_tropicalis
ENSUAMG00000009305	-	61	67.857	ENSXCOG00000012490	nmd3	59	69.388	Xiphophorus_couchianus
ENSUAMG00000009305	-	99	77.612	ENSXMAG00000018406	nmd3	82	76.399	Xiphophorus_maculatus