EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000009600 (Gene tree)
Gene ID: -
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 94838 bases
Position: chrLZNR01005080.1:24781-119618
Accession: 17575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000011829	RRM_5	PF13893.6	3.2e-07	1	2
ENSUAMP00000011829	RRM_5	PF13893.6	3.2e-07	2	2
ENSUAMP00000011829	RRM_1	PF00076.22	1.9e-43	1	4
ENSUAMP00000011829	RRM_1	PF00076.22	1.9e-43	2	4
ENSUAMP00000011829	RRM_1	PF00076.22	1.9e-43	3	4
ENSUAMP00000011829	RRM_1	PF00076.22	1.9e-43	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000013299	SPEN-201	13818	-	ENSUAMP00000011829	3674 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000009600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000009600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000009600	SPEN	100	88.390	ENSG00000065526	SPEN	99	99.663	Homo_sapiens
ENSUAMG00000009600	SPEN	92	81.868	ENSAPOG00000009853	-	91	74.906	Acanthochromis_polyacanthus
ENSUAMG00000009600	SPEN	76	76.263	ENSAPOG00000011411	si:ch1073-335m2.2	77	76.804	Acanthochromis_polyacanthus
ENSUAMG00000009600	SPEN	100	97.714	ENSAMEG00000011817	SPEN	100	97.714	Ailuropoda_melanoleuca
ENSUAMG00000009600	SPEN	73	77.778	ENSAOCG00000008077	si:ch1073-335m2.2	88	77.778	Amphiprion_ocellaris
ENSUAMG00000009600	SPEN	92	81.868	ENSAOCG00000014505	-	67	81.868	Amphiprion_ocellaris
ENSUAMG00000009600	SPEN	92	81.868	ENSAPEG00000010288	-	67	81.868	Amphiprion_percula
ENSUAMG00000009600	SPEN	81	77.778	ENSAPEG00000013515	si:ch1073-335m2.2	89	77.778	Amphiprion_percula
ENSUAMG00000009600	SPEN	96	82.584	ENSATEG00000005627	-	82	82.418	Anabas_testudineus
ENSUAMG00000009600	SPEN	79	84.024	ENSATEG00000007674	si:ch1073-335m2.2	65	84.024	Anabas_testudineus
ENSUAMG00000009600	SPEN	96	63.686	ENSACAG00000013761	SPEN	100	63.912	Anolis_carolinensis
ENSUAMG00000009600	SPEN	99	87.168	ENSANAG00000034428	SPEN	99	87.219	Aotus_nancymaae
ENSUAMG00000009600	SPEN	94	81.461	ENSACLG00000016922	-	67	78.283	Astatotilapia_calliptera
ENSUAMG00000009600	SPEN	64	84.795	ENSACLG00000021433	si:ch1073-335m2.2	67	84.795	Astatotilapia_calliptera
ENSUAMG00000009600	SPEN	96	83.240	ENSAMXG00000012485	spen	99	47.911	Astyanax_mexicanus
ENSUAMG00000009600	SPEN	100	89.532	ENSBTAG00000018729	SPEN	100	89.641	Bos_taurus
ENSUAMG00000009600	SPEN	100	86.981	ENSCJAG00000008527	SPEN	100	87.085	Callithrix_jacchus
ENSUAMG00000009600	SPEN	88	93.181	ENSCAFG00000016132	-	97	96.395	Canis_familiaris
ENSUAMG00000009600	SPEN	100	89.967	ENSCHIG00000025070	SPEN	100	90.076	Capra_hircus
ENSUAMG00000009600	SPEN	92	86.621	ENSTSYG00000036016	SPEN	99	86.773	Carlito_syrichta
ENSUAMG00000009600	SPEN	99	82.507	ENSCAPG00000013803	SPEN	100	80.223	Cavia_aperea
ENSUAMG00000009600	SPEN	99	80.978	ENSCPOG00000014036	SPEN	100	80.842	Cavia_porcellus
ENSUAMG00000009600	SPEN	100	82.771	ENSCCAG00000020258	SPEN	99	85.661	Cebus_capucinus
ENSUAMG00000009600	SPEN	95	100.000	ENSCATG00000015079	SPEN	99	99.265	Cercocebus_atys
ENSUAMG00000009600	SPEN	99	81.980	ENSCLAG00000002018	SPEN	100	81.898	Chinchilla_lanigera
ENSUAMG00000009600	SPEN	100	88.516	ENSCSAG00000000841	SPEN	100	88.242	Chlorocebus_sabaeus
ENSUAMG00000009600	SPEN	97	72.126	ENSCPBG00000010477	SPEN	100	72.348	Chrysemys_picta_bellii
ENSUAMG00000009600	SPEN	99	86.862	ENSCANG00000034547	SPEN	99	86.781	Colobus_angolensis_palliatus
ENSUAMG00000009600	SPEN	99	80.607	ENSCGRG00001007725	Spen	100	80.390	Cricetulus_griseus_chok1gshd
ENSUAMG00000009600	SPEN	99	79.701	ENSCGRG00000010581	Spen	100	79.184	Cricetulus_griseus_crigri
ENSUAMG00000009600	SPEN	82	84.270	ENSCSEG00000003915	-	96	83.889	Cynoglossus_semilaevis
ENSUAMG00000009600	SPEN	84	60.764	ENSCVAG00000009075	si:ch1073-335m2.2	68	85.380	Cyprinodon_variegatus
ENSUAMG00000009600	SPEN	96	45.686	ENSCVAG00000016346	-	99	46.003	Cyprinodon_variegatus
ENSUAMG00000009600	SPEN	77	67.511	ENSDARG00000074332	si:ch1073-335m2.2	82	74.500	Danio_rerio
ENSUAMG00000009600	SPEN	94	66.667	ENSDARG00000074245	spen	100	88.889	Danio_rerio
ENSUAMG00000009600	SPEN	100	87.466	ENSDNOG00000041948	SPEN	100	87.331	Dasypus_novemcinctus
ENSUAMG00000009600	SPEN	99	79.542	ENSDORG00000023909	Spen	99	79.679	Dipodomys_ordii
ENSUAMG00000009600	SPEN	67	97.479	ENSETEG00000016692	-	67	97.490	Echinops_telfairi
ENSUAMG00000009600	SPEN	96	100.000	ENSEASG00005015911	SPEN	99	100.000	Equus_asinus_asinus
ENSUAMG00000009600	SPEN	96	100.000	ENSECAG00000008833	SPEN	99	100.000	Equus_caballus
ENSUAMG00000009600	SPEN	71	93.023	ENSEEUG00000010255	SPEN	76	93.023	Erinaceus_europaeus
ENSUAMG00000009600	SPEN	64	79.781	ENSELUG00000007726	si:ch1073-335m2.2	93	79.781	Esox_lucius
ENSUAMG00000009600	SPEN	99	81.545	ENSFDAG00000010212	SPEN	100	81.702	Fukomys_damarensis
ENSUAMG00000009600	SPEN	59	83.041	ENSFHEG00000004544	si:ch1073-335m2.2	64	83.041	Fundulus_heteroclitus
ENSUAMG00000009600	SPEN	85	81.006	ENSGMOG00000008156	si:ch1073-335m2.2	69	81.006	Gadus_morhua
ENSUAMG00000009600	SPEN	83	67.470	ENSGMOG00000008397	-	64	77.949	Gadus_morhua
ENSUAMG00000009600	SPEN	78	84.615	ENSGAFG00000021570	si:ch1073-335m2.2	77	84.615	Gambusia_affinis
ENSUAMG00000009600	SPEN	96	45.029	ENSGAFG00000015819	-	91	74.157	Gambusia_affinis
ENSUAMG00000009600	SPEN	75	70.476	ENSGACG00000001176	si:ch1073-335m2.2	82	81.765	Gasterosteus_aculeatus
ENSUAMG00000009600	SPEN	96	47.004	ENSGACG00000005341	-	70	58.384	Gasterosteus_aculeatus
ENSUAMG00000009600	SPEN	97	97.456	ENSGAGG00000020785	SPEN	100	97.456	Gopherus_agassizii
ENSUAMG00000009600	SPEN	100	88.546	ENSGGOG00000012041	SPEN	100	88.407	Gorilla_gorilla
ENSUAMG00000009600	SPEN	80	84.795	ENSHBUG00000023253	si:ch1073-335m2.2	68	84.795	Haplochromis_burtoni
ENSUAMG00000009600	SPEN	94	81.461	ENSHBUG00000020626	-	68	78.283	Haplochromis_burtoni
ENSUAMG00000009600	SPEN	100	81.957	ENSHGLG00000019259	SPEN	100	81.776	Heterocephalus_glaber_female
ENSUAMG00000009600	SPEN	88	85.189	ENSHGLG00100019294	SPEN	95	85.189	Heterocephalus_glaber_male
ENSUAMG00000009600	SPEN	70	42.882	ENSHCOG00000006004	si:ch1073-335m2.2	60	49.523	Hippocampus_comes
ENSUAMG00000009600	SPEN	77	74.211	ENSIPUG00000018212	si:ch1073-335m2.2	87	74.211	Ictalurus_punctatus
ENSUAMG00000009600	SPEN	96	82.778	ENSIPUG00000021668	spen	69	81.967	Ictalurus_punctatus
ENSUAMG00000009600	SPEN	99	87.086	ENSSTOG00000021428	SPEN	100	88.071	Ictidomys_tridecemlineatus
ENSUAMG00000009600	SPEN	100	82.812	ENSJJAG00000010882	Spen	100	83.028	Jaculus_jaculus
ENSUAMG00000009600	SPEN	63	83.626	ENSKMAG00000021725	si:ch1073-335m2.2	65	83.626	Kryptolebias_marmoratus
ENSUAMG00000009600	SPEN	96	80.899	ENSKMAG00000003882	-	69	56.257	Kryptolebias_marmoratus
ENSUAMG00000009600	SPEN	77	84.483	ENSLBEG00000019129	-	59	84.483	Labrus_bergylta
ENSUAMG00000009600	SPEN	73	72.500	ENSLBEG00000020855	si:ch1073-335m2.2	60	81.657	Labrus_bergylta
ENSUAMG00000009600	SPEN	89	95.652	ENSLACG00000003258	SPEN	97	95.652	Latimeria_chalumnae
ENSUAMG00000009600	SPEN	100	52.598	ENSLOCG00000007896	si:ch1073-335m2.2	99	54.039	Lepisosteus_oculatus
ENSUAMG00000009600	SPEN	99	87.974	ENSLAFG00000004524	SPEN	100	88.110	Loxodonta_africana
ENSUAMG00000009600	SPEN	100	88.309	ENSMFAG00000041974	SPEN	100	88.224	Macaca_fascicularis
ENSUAMG00000009600	SPEN	100	88.281	ENSMMUG00000008026	SPEN	100	88.197	Macaca_mulatta
ENSUAMG00000009600	SPEN	100	88.309	ENSMNEG00000042402	SPEN	100	88.224	Macaca_nemestrina
ENSUAMG00000009600	SPEN	100	87.903	ENSMLEG00000039293	SPEN	99	87.818	Mandrillus_leucophaeus
ENSUAMG00000009600	SPEN	89	73.659	ENSMAMG00000023870	si:ch1073-335m2.2	65	84.431	Mastacembelus_armatus
ENSUAMG00000009600	SPEN	64	84.795	ENSMZEG00005011762	si:ch1073-335m2.2	67	84.795	Maylandia_zebra
ENSUAMG00000009600	SPEN	85	67.742	ENSMZEG00005021491	-	63	78.283	Maylandia_zebra
ENSUAMG00000009600	SPEN	98	82.764	ENSMAUG00000008318	Spen	99	82.771	Mesocricetus_auratus
ENSUAMG00000009600	SPEN	100	88.668	ENSMICG00000030994	SPEN	100	88.505	Microcebus_murinus
ENSUAMG00000009600	SPEN	100	80.265	ENSMOCG00000016083	Spen	100	80.545	Microtus_ochrogaster
ENSUAMG00000009600	SPEN	51	79.070	ENSMMOG00000021742	si:ch1073-335m2.2	58	81.006	Mola_mola
ENSUAMG00000009600	SPEN	97	71.314	ENSMODG00000003411	SPEN	100	71.057	Monodelphis_domestica
ENSUAMG00000009600	SPEN	96	82.022	ENSMALG00000008625	-	99	46.532	Monopterus_albus
ENSUAMG00000009600	SPEN	100	79.491	MGP_CAROLIEiJ_G0026745	Spen	100	79.675	Mus_caroli
ENSUAMG00000009600	SPEN	100	79.162	ENSMUSG00000040761	Spen	100	79.519	Mus_musculus
ENSUAMG00000009600	SPEN	100	78.994	MGP_PahariEiJ_G0029076	Spen	100	79.329	Mus_pahari
ENSUAMG00000009600	SPEN	100	79.552	MGP_SPRETEiJ_G0027724	Spen	100	79.843	Mus_spretus
ENSUAMG00000009600	SPEN	98	94.471	ENSMPUG00000016317	SPEN	100	94.526	Mustela_putorius_furo
ENSUAMG00000009600	SPEN	94	88.963	ENSMLUG00000010144	SPEN	99	94.129	Myotis_lucifugus
ENSUAMG00000009600	SPEN	100	78.101	ENSNGAG00000000641	Spen	95	84.206	Nannospalax_galili
ENSUAMG00000009600	SPEN	80	68.548	ENSNBRG00000022090	-	61	78.788	Neolamprologus_brichardi
ENSUAMG00000009600	SPEN	59	84.795	ENSNBRG00000005733	si:ch1073-335m2.2	64	84.795	Neolamprologus_brichardi
ENSUAMG00000009600	SPEN	99	88.202	ENSNLEG00000007652	SPEN	99	88.226	Nomascus_leucogenys
ENSUAMG00000009600	SPEN	87	92.708	ENSMEUG00000002422	SPEN	91	92.708	Notamacropus_eugenii
ENSUAMG00000009600	SPEN	93	90.441	ENSOPRG00000015800	SPEN	93	90.441	Ochotona_princeps
ENSUAMG00000009600	SPEN	100	80.395	ENSODEG00000016644	SPEN	100	79.698	Octodon_degus
ENSUAMG00000009600	SPEN	93	68.145	ENSONIG00000006573	-	99	81.273	Oreochromis_niloticus
ENSUAMG00000009600	SPEN	99	83.423	ENSOCUG00000010840	SPEN	99	83.320	Oryctolagus_cuniculus
ENSUAMG00000009600	SPEN	67	82.222	ENSORLG00000028894	-	92	82.222	Oryzias_latipes
ENSUAMG00000009600	SPEN	81	82.222	ENSORLG00020007735	-	62	82.222	Oryzias_latipes_hni
ENSUAMG00000009600	SPEN	69	82.609	ENSORLG00015005537	si:ch1073-335m2.2	84	82.609	Oryzias_latipes_hsok
ENSUAMG00000009600	SPEN	91	82.222	ENSORLG00015022085	-	66	82.222	Oryzias_latipes_hsok
ENSUAMG00000009600	SPEN	70	82.822	ENSOMEG00000004509	si:ch1073-335m2.2	86	82.456	Oryzias_melastigma
ENSUAMG00000009600	SPEN	88	84.483	ENSOMEG00000007639	-	92	84.483	Oryzias_melastigma
ENSUAMG00000009600	SPEN	100	88.331	ENSOGAG00000025110	SPEN	100	88.304	Otolemur_garnettii
ENSUAMG00000009600	SPEN	99	89.167	ENSOARG00000008477	SPEN	99	89.222	Ovis_aries
ENSUAMG00000009600	SPEN	99	88.216	ENSPPAG00000035690	SPEN	100	88.271	Pan_paniscus
ENSUAMG00000009600	SPEN	100	88.305	ENSPTRG00000000210	SPEN	100	88.360	Pan_troglodytes
ENSUAMG00000009600	SPEN	100	87.064	ENSPANG00000006293	SPEN	100	86.979	Papio_anubis
ENSUAMG00000009600	SPEN	94	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	67	100.000	Paramormyrops_kingsleyae
ENSUAMG00000009600	SPEN	83	86.667	ENSPKIG00000002617	SPEN	91	81.111	Paramormyrops_kingsleyae
ENSUAMG00000009600	SPEN	96	69.667	ENSPSIG00000008026	SPEN	100	69.581	Pelodiscus_sinensis
ENSUAMG00000009600	SPEN	99	80.649	ENSPEMG00000022997	Spen	100	80.621	Peromyscus_maniculatus_bairdii
ENSUAMG00000009600	SPEN	59	85.799	ENSPFOG00000017986	si:ch1073-335m2.2	64	85.799	Poecilia_formosa
ENSUAMG00000009600	SPEN	69	85.799	ENSPLAG00000016625	si:ch1073-335m2.2	86	85.799	Poecilia_latipinna
ENSUAMG00000009600	SPEN	55	85.799	ENSPMEG00000002674	si:ch1073-335m2.2	64	85.799	Poecilia_mexicana
ENSUAMG00000009600	SPEN	96	45.146	ENSPMEG00000006764	-	91	73.783	Poecilia_mexicana
ENSUAMG00000009600	SPEN	96	45.262	ENSPREG00000010399	-	97	84.483	Poecilia_reticulata
ENSUAMG00000009600	SPEN	73	85.799	ENSPREG00000005357	si:ch1073-335m2.2	86	85.799	Poecilia_reticulata
ENSUAMG00000009600	SPEN	100	88.600	ENSPPYG00000001834	SPEN	100	88.651	Pongo_abelii
ENSUAMG00000009600	SPEN	88	91.459	ENSPCAG00000009543	SPEN	92	86.787	Procavia_capensis
ENSUAMG00000009600	SPEN	100	87.884	ENSPCOG00000021735	SPEN	100	87.748	Propithecus_coquereli
ENSUAMG00000009600	SPEN	84	96.277	ENSPVAG00000013794	SPEN	84	96.277	Pteropus_vampyrus
ENSUAMG00000009600	SPEN	64	84.795	ENSPNYG00000009042	si:ch1073-335m2.2	67	84.795	Pundamilia_nyererei
ENSUAMG00000009600	SPEN	94	81.461	ENSPNYG00000012379	-	67	78.283	Pundamilia_nyererei
ENSUAMG00000009600	SPEN	96	84.181	ENSPNAG00000020795	spen	86	78.195	Pygocentrus_nattereri
ENSUAMG00000009600	SPEN	81	80.114	ENSPNAG00000011452	si:ch1073-335m2.2	89	80.114	Pygocentrus_nattereri
ENSUAMG00000009600	SPEN	99	79.689	ENSRNOG00000033556	Spen	100	79.580	Rattus_norvegicus
ENSUAMG00000009600	SPEN	99	88.469	ENSRBIG00000039654	SPEN	100	88.329	Rhinopithecus_bieti
ENSUAMG00000009600	SPEN	99	88.380	ENSRROG00000035686	SPEN	100	88.183	Rhinopithecus_roxellana
ENSUAMG00000009600	SPEN	99	85.468	ENSSBOG00000028770	SPEN	99	85.409	Saimiri_boliviensis_boliviensis
ENSUAMG00000009600	SPEN	97	71.141	ENSSHAG00000004960	SPEN	99	93.561	Sarcophilus_harrisii
ENSUAMG00000009600	SPEN	85	84.737	ENSSFOG00015010267	si:ch1073-335m2.2	100	84.737	Scleropages_formosus
ENSUAMG00000009600	SPEN	84	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	96	91.954	Scleropages_formosus
ENSUAMG00000009600	SPEN	82	76.650	ENSSMAG00000000125	si:ch1073-335m2.2	68	79.348	Scophthalmus_maximus
ENSUAMG00000009600	SPEN	96	82.022	ENSSMAG00000008996	-	69	57.481	Scophthalmus_maximus
ENSUAMG00000009600	SPEN	96	82.584	ENSSDUG00000003476	-	91	75.836	Seriola_dumerili
ENSUAMG00000009600	SPEN	82	84.211	ENSSDUG00000008416	si:ch1073-335m2.2	68	84.211	Seriola_dumerili
ENSUAMG00000009600	SPEN	78	84.211	ENSSLDG00000023347	si:ch1073-335m2.2	70	84.211	Seriola_lalandi_dorsalis
ENSUAMG00000009600	SPEN	96	82.584	ENSSLDG00000012950	-	91	75.836	Seriola_lalandi_dorsalis
ENSUAMG00000009600	SPEN	86	66.848	ENSSPUG00000001866	-	100	66.958	Sphenodon_punctatus
ENSUAMG00000009600	SPEN	93	76.884	ENSSPAG00000012454	si:ch1073-335m2.2	68	77.436	Stegastes_partitus
ENSUAMG00000009600	SPEN	96	81.461	ENSSPAG00000006014	-	91	74.906	Stegastes_partitus
ENSUAMG00000009600	SPEN	85	90.423	ENSSSCG00000034484	SPEN	99	90.175	Sus_scrofa
ENSUAMG00000009600	SPEN	96	44.667	ENSTRUG00000024350	-	99	45.193	Takifugu_rubripes
ENSUAMG00000009600	SPEN	93	77.559	ENSTNIG00000010907	-	70	77.805	Tetraodon_nigroviridis
ENSUAMG00000009600	SPEN	77	93.458	ENSTBEG00000003628	SPEN	77	96.923	Tupaia_belangeri
ENSUAMG00000009600	SPEN	79	96.317	ENSTTRG00000015704	SPEN	79	97.436	Tursiops_truncatus
ENSUAMG00000009600	SPEN	100	97.640	ENSUMAG00000021641	SPEN	100	97.640	Ursus_maritimus
ENSUAMG00000009600	SPEN	96	100.000	ENSVVUG00000028951	SPEN	99	100.000	Vulpes_vulpes
ENSUAMG00000009600	SPEN	97	56.833	ENSXETG00000023114	SPEN	99	56.863	Xenopus_tropicalis
ENSUAMG00000009600	SPEN	66	84.615	ENSXCOG00000004516	si:ch1073-335m2.2	75	84.615	Xiphophorus_couchianus
ENSUAMG00000009600	SPEN	73	60.000	ENSXMAG00000029887	si:ch1073-335m2.2	77	84.615	Xiphophorus_maculatus
ENSUAMG00000009600	SPEN	96	45.097	ENSXMAG00000021384	-	90	72.453	Xiphophorus_maculatus