EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000009653 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 15286 bases
Position: chrLZNR01000016.1:97171-112456
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000011907	zf-C2H2	PF00096.26	9.8e-13	1	2
ENSUAMP00000011907	zf-C2H2	PF00096.26	9.8e-13	2	2
ENSUAMP00000011907	zf-met	PF12874.7	8.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000013382	PRDM12-201	1086	-	ENSUAMP00000011907	361 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000009653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000009653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000009653	PRDM12	68	42.222	ENSUAMG00000009994	PRDM5	84	44.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000009653	PRDM12	97	98.281	ENSG00000130711	PRDM12	95	98.281	Homo_sapiens
ENSUAMG00000009653	PRDM12	96	65.352	ENSAPOG00000018234	-	93	66.860	Acanthochromis_polyacanthus
ENSUAMG00000009653	PRDM12	90	80.580	ENSAPOG00000016051	prdm12b	90	80.580	Acanthochromis_polyacanthus
ENSUAMG00000009653	PRDM12	89	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSUAMG00000009653	PRDM12	96	77.027	ENSACIG00000005193	-	91	80.290	Amphilophus_citrinellus
ENSUAMG00000009653	PRDM12	92	79.827	ENSACIG00000019578	prdm12b	93	79.943	Amphilophus_citrinellus
ENSUAMG00000009653	PRDM12	90	82.111	ENSAOCG00000015040	prdm12b	92	80.286	Amphiprion_ocellaris
ENSUAMG00000009653	PRDM12	90	82.840	ENSAPEG00000015092	prdm12b	92	80.980	Amphiprion_percula
ENSUAMG00000009653	PRDM12	90	79.464	ENSAPEG00000022849	-	89	78.363	Amphiprion_percula
ENSUAMG00000009653	PRDM12	93	80.938	ENSATEG00000014595	-	96	82.371	Anabas_testudineus
ENSUAMG00000009653	PRDM12	94	98.529	ENSANAG00000020616	PRDM12	100	98.529	Aotus_nancymaae
ENSUAMG00000009653	PRDM12	90	81.579	ENSACLG00000007631	-	87	81.579	Astatotilapia_calliptera
ENSUAMG00000009653	PRDM12	94	81.287	ENSACLG00000011876	prdm12b	92	82.440	Astatotilapia_calliptera
ENSUAMG00000009653	PRDM12	96	80.172	ENSAMXG00000008540	PRDM12	90	84.356	Astyanax_mexicanus
ENSUAMG00000009653	PRDM12	91	88.323	ENSAMXG00000033665	prdm12b	90	88.623	Astyanax_mexicanus
ENSUAMG00000009653	PRDM12	97	98.854	ENSBTAG00000023797	PRDM12	97	98.854	Bos_taurus
ENSUAMG00000009653	PRDM12	97	98.567	ENSCJAG00000020540	PRDM12	97	98.567	Callithrix_jacchus
ENSUAMG00000009653	PRDM12	85	98.039	ENSCAFG00000023076	PRDM12	95	98.039	Canis_familiaris
ENSUAMG00000009653	PRDM12	97	99.140	ENSCAFG00020024046	PRDM12	96	99.140	Canis_lupus_dingo
ENSUAMG00000009653	PRDM12	97	99.140	ENSCHIG00000025005	PRDM12	96	99.140	Capra_hircus
ENSUAMG00000009653	PRDM12	87	98.083	ENSCPOG00000005901	PRDM12	95	98.083	Cavia_porcellus
ENSUAMG00000009653	PRDM12	97	98.567	ENSCCAG00000037485	PRDM12	96	98.567	Cebus_capucinus
ENSUAMG00000009653	PRDM12	97	98.567	ENSCATG00000020327	PRDM12	96	98.567	Cercocebus_atys
ENSUAMG00000009653	PRDM12	93	97.904	ENSCLAG00000005499	PRDM12	92	97.904	Chinchilla_lanigera
ENSUAMG00000009653	PRDM12	97	98.567	ENSCSAG00000014756	PRDM12	96	98.567	Chlorocebus_sabaeus
ENSUAMG00000009653	PRDM12	94	92.669	ENSCPBG00000022628	PRDM12	94	93.413	Chrysemys_picta_bellii
ENSUAMG00000009653	PRDM12	97	98.281	ENSCGRG00001015005	Prdm12	95	98.281	Cricetulus_griseus_chok1gshd
ENSUAMG00000009653	PRDM12	91	77.778	ENSCVAG00000000944	-	90	77.778	Cyprinodon_variegatus
ENSUAMG00000009653	PRDM12	91	82.544	ENSCVAG00000017166	prdm12b	92	82.111	Cyprinodon_variegatus
ENSUAMG00000009653	PRDM12	93	86.297	ENSDARG00000007430	prdm12b	93	86.257	Danio_rerio
ENSUAMG00000009653	PRDM12	96	97.708	ENSDNOG00000042302	PRDM12	96	97.708	Dasypus_novemcinctus
ENSUAMG00000009653	PRDM12	89	62.678	ENSEBUG00000016780	prdm12b	78	64.103	Eptatretus_burgeri
ENSUAMG00000009653	PRDM12	97	98.567	ENSEASG00005008472	PRDM12	96	98.567	Equus_asinus_asinus
ENSUAMG00000009653	PRDM12	97	98.281	ENSECAG00000005933	PRDM12	96	98.281	Equus_caballus
ENSUAMG00000009653	PRDM12	90	83.333	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSUAMG00000009653	PRDM12	93	83.908	ENSELUG00000009905	prdm12b	91	85.417	Esox_lucius
ENSUAMG00000009653	PRDM12	97	99.140	ENSFCAG00000043086	PRDM12	96	99.140	Felis_catus
ENSUAMG00000009653	PRDM12	94	92.962	ENSFALG00000001445	PRDM12	84	93.713	Ficedula_albicollis
ENSUAMG00000009653	PRDM12	90	82.789	ENSFHEG00000003944	prdm12b	92	81.686	Fundulus_heteroclitus
ENSUAMG00000009653	PRDM12	96	75.134	ENSFHEG00000007746	-	88	80.236	Fundulus_heteroclitus
ENSUAMG00000009653	PRDM12	92	82.282	ENSGMOG00000011797	prdm12b	94	82.282	Gadus_morhua
ENSUAMG00000009653	PRDM12	94	92.962	ENSGALG00000003895	PRDM12	94	93.713	Gallus_gallus
ENSUAMG00000009653	PRDM12	92	82.596	ENSGAFG00000010827	prdm12b	90	82.596	Gambusia_affinis
ENSUAMG00000009653	PRDM12	94	81.375	ENSGACG00000016713	prdm12b	91	83.432	Gasterosteus_aculeatus
ENSUAMG00000009653	PRDM12	94	92.962	ENSGAGG00000014083	PRDM12	94	93.713	Gopherus_agassizii
ENSUAMG00000009653	PRDM12	97	97.994	ENSGGOG00000010568	PRDM12	95	97.994	Gorilla_gorilla
ENSUAMG00000009653	PRDM12	94	79.603	ENSHBUG00000022878	prdm12b	93	80.692	Haplochromis_burtoni
ENSUAMG00000009653	PRDM12	90	81.579	ENSHBUG00000022537	-	80	81.579	Haplochromis_burtoni
ENSUAMG00000009653	PRDM12	97	96.562	ENSHGLG00000013939	PRDM12	96	96.562	Heterocephalus_glaber_female
ENSUAMG00000009653	PRDM12	96	74.022	ENSHCOG00000021167	-	95	76.176	Hippocampus_comes
ENSUAMG00000009653	PRDM12	90	81.287	ENSHCOG00000003663	prdm12b	89	80.516	Hippocampus_comes
ENSUAMG00000009653	PRDM12	91	87.425	ENSIPUG00000017053	prdm12b	91	87.425	Ictalurus_punctatus
ENSUAMG00000009653	PRDM12	94	79.592	ENSIPUG00000019544	PRDM12	90	82.317	Ictalurus_punctatus
ENSUAMG00000009653	PRDM12	93	99.405	ENSSTOG00000005986	PRDM12	88	99.405	Ictidomys_tridecemlineatus
ENSUAMG00000009653	PRDM12	91	99.091	ENSJJAG00000005424	Prdm12	100	99.091	Jaculus_jaculus
ENSUAMG00000009653	PRDM12	95	77.429	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSUAMG00000009653	PRDM12	91	78.492	ENSKMAG00000016921	prdm12b	89	78.771	Kryptolebias_marmoratus
ENSUAMG00000009653	PRDM12	90	83.832	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSUAMG00000009653	PRDM12	90	81.306	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSUAMG00000009653	PRDM12	94	89.706	ENSLACG00000017560	PRDM12	94	90.390	Latimeria_chalumnae
ENSUAMG00000009653	PRDM12	92	86.431	ENSLOCG00000005429	prdm12b	93	86.726	Lepisosteus_oculatus
ENSUAMG00000009653	PRDM12	96	97.443	ENSLAFG00000006979	PRDM12	94	97.443	Loxodonta_africana
ENSUAMG00000009653	PRDM12	96	98.563	ENSMFAG00000040322	PRDM12	95	98.563	Macaca_fascicularis
ENSUAMG00000009653	PRDM12	97	98.567	ENSMNEG00000037234	PRDM12	96	98.567	Macaca_nemestrina
ENSUAMG00000009653	PRDM12	90	81.250	ENSMAMG00000018988	-	86	81.250	Mastacembelus_armatus
ENSUAMG00000009653	PRDM12	91	82.405	ENSMAMG00000013212	prdm12b	90	83.383	Mastacembelus_armatus
ENSUAMG00000009653	PRDM12	90	81.579	ENSMZEG00005000415	PRDM12	86	81.579	Maylandia_zebra
ENSUAMG00000009653	PRDM12	94	92.962	ENSMGAG00000005438	PRDM12	94	93.713	Meleagris_gallopavo
ENSUAMG00000009653	PRDM12	97	96.275	ENSMAUG00000013040	Prdm12	96	96.275	Mesocricetus_auratus
ENSUAMG00000009653	PRDM12	97	98.571	ENSMICG00000015480	PRDM12	97	98.571	Microcebus_murinus
ENSUAMG00000009653	PRDM12	95	97.953	ENSMOCG00000021026	Prdm12	93	97.953	Microtus_ochrogaster
ENSUAMG00000009653	PRDM12	94	95.015	ENSMODG00000012108	PRDM12	94	95.808	Monodelphis_domestica
ENSUAMG00000009653	PRDM12	94	68.678	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSUAMG00000009653	PRDM12	97	97.994	MGP_CAROLIEiJ_G0023414	Prdm12	96	97.994	Mus_caroli
ENSUAMG00000009653	PRDM12	97	97.994	ENSMUSG00000079466	Prdm12	96	97.994	Mus_musculus
ENSUAMG00000009653	PRDM12	97	97.994	MGP_PahariEiJ_G0024871	Prdm12	96	97.994	Mus_pahari
ENSUAMG00000009653	PRDM12	97	97.994	MGP_SPRETEiJ_G0024331	Prdm12	96	97.994	Mus_spretus
ENSUAMG00000009653	PRDM12	91	98.471	ENSNGAG00000018480	Prdm12	94	98.485	Nannospalax_galili
ENSUAMG00000009653	PRDM12	92	80.172	ENSNBRG00000006727	prdm12b	93	80.000	Neolamprologus_brichardi
ENSUAMG00000009653	PRDM12	96	74.302	ENSNBRG00000024312	-	95	76.608	Neolamprologus_brichardi
ENSUAMG00000009653	PRDM12	94	84.164	ENSMEUG00000003828	PRDM12	94	84.731	Notamacropus_eugenii
ENSUAMG00000009653	PRDM12	91	98.788	ENSOPRG00000008680	PRDM12	100	98.788	Ochotona_princeps
ENSUAMG00000009653	PRDM12	95	97.376	ENSODEG00000016282	PRDM12	64	97.376	Octodon_degus
ENSUAMG00000009653	PRDM12	57	95.588	ENSOANG00000001043	PRDM12	91	96.954	Ornithorhynchus_anatinus
ENSUAMG00000009653	PRDM12	87	93.610	ENSOCUG00000008241	PRDM12	98	94.754	Oryctolagus_cuniculus
ENSUAMG00000009653	PRDM12	94	79.552	ENSORLG00000007114	prdm12b	92	80.980	Oryzias_latipes
ENSUAMG00000009653	PRDM12	90	79.765	ENSORLG00000017558	-	87	80.352	Oryzias_latipes
ENSUAMG00000009653	PRDM12	90	79.532	ENSORLG00020013167	-	87	80.117	Oryzias_latipes_hni
ENSUAMG00000009653	PRDM12	91	80.692	ENSORLG00020019565	prdm12b	91	80.692	Oryzias_latipes_hni
ENSUAMG00000009653	PRDM12	91	80.403	ENSORLG00015007621	prdm12b	92	80.403	Oryzias_latipes_hsok
ENSUAMG00000009653	PRDM12	90	79.765	ENSORLG00015003435	-	87	80.352	Oryzias_latipes_hsok
ENSUAMG00000009653	PRDM12	91	78.348	ENSOMEG00000007762	-	94	78.632	Oryzias_melastigma
ENSUAMG00000009653	PRDM12	99	76.596	ENSOMEG00000004134	prdm12b	91	80.286	Oryzias_melastigma
ENSUAMG00000009653	PRDM12	92	100.000	ENSOGAG00000007557	PRDM12	100	100.000	Otolemur_garnettii
ENSUAMG00000009653	PRDM12	80	98.606	ENSPPAG00000031506	-	97	98.606	Pan_paniscus
ENSUAMG00000009653	PRDM12	96	89.368	ENSPPRG00000023024	PRDM12	86	91.045	Panthera_pardus
ENSUAMG00000009653	PRDM12	97	98.281	ENSPTRG00000021475	PRDM12	95	98.281	Pan_troglodytes
ENSUAMG00000009653	PRDM12	97	98.281	ENSPTRG00000043324	-	95	98.281	Pan_troglodytes
ENSUAMG00000009653	PRDM12	97	98.567	ENSPANG00000025967	PRDM12	96	98.567	Papio_anubis
ENSUAMG00000009653	PRDM12	94	78.348	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSUAMG00000009653	PRDM12	92	85.345	ENSPKIG00000007228	prdm12b	94	85.632	Paramormyrops_kingsleyae
ENSUAMG00000009653	PRDM12	94	92.082	ENSPSIG00000006739	PRDM12	94	92.814	Pelodiscus_sinensis
ENSUAMG00000009653	PRDM12	92	80.952	ENSPMGG00000002356	-	88	80.655	Periophthalmus_magnuspinnatus
ENSUAMG00000009653	PRDM12	91	83.136	ENSPMGG00000008867	prdm12b	92	82.507	Periophthalmus_magnuspinnatus
ENSUAMG00000009653	PRDM12	96	96.232	ENSPEMG00000009969	Prdm12	94	96.232	Peromyscus_maniculatus_bairdii
ENSUAMG00000009653	PRDM12	94	95.308	ENSPCIG00000024119	PRDM12	94	96.108	Phascolarctos_cinereus
ENSUAMG00000009653	PRDM12	92	82.216	ENSPFOG00000019841	prdm12b	93	82.216	Poecilia_formosa
ENSUAMG00000009653	PRDM12	91	83.333	ENSPLAG00000016626	prdm12b	90	82.891	Poecilia_latipinna
ENSUAMG00000009653	PRDM12	89	82.371	ENSPMEG00000016698	prdm12b	89	82.371	Poecilia_mexicana
ENSUAMG00000009653	PRDM12	91	83.186	ENSPREG00000015073	prdm12b	89	82.749	Poecilia_reticulata
ENSUAMG00000009653	PRDM12	93	74.644	ENSPREG00000003211	-	90	77.982	Poecilia_reticulata
ENSUAMG00000009653	PRDM12	97	96.562	ENSPPYG00000019694	PRDM12	95	98.802	Pongo_abelii
ENSUAMG00000009653	PRDM12	97	98.854	ENSPCOG00000022255	PRDM12	95	98.854	Propithecus_coquereli
ENSUAMG00000009653	PRDM12	97	98.281	ENSPVAG00000001511	PRDM12	95	98.281	Pteropus_vampyrus
ENSUAMG00000009653	PRDM12	90	81.579	ENSPNYG00000013589	-	86	81.579	Pundamilia_nyererei
ENSUAMG00000009653	PRDM12	94	78.873	ENSPNYG00000009607	prdm12b	93	79.943	Pundamilia_nyererei
ENSUAMG00000009653	PRDM12	90	80.909	ENSPNAG00000013396	PRDM12	88	80.547	Pygocentrus_nattereri
ENSUAMG00000009653	PRDM12	91	88.922	ENSPNAG00000024532	prdm12b	91	88.922	Pygocentrus_nattereri
ENSUAMG00000009653	PRDM12	97	97.994	ENSRNOG00000009218	Prdm12	96	97.994	Rattus_norvegicus
ENSUAMG00000009653	PRDM12	88	99.369	ENSRBIG00000042712	PRDM12	91	96.960	Rhinopithecus_bieti
ENSUAMG00000009653	PRDM12	89	99.377	ENSRROG00000043554	PRDM12	100	99.377	Rhinopithecus_roxellana
ENSUAMG00000009653	PRDM12	94	94.444	ENSSHAG00000015972	PRDM12	94	95.224	Sarcophilus_harrisii
ENSUAMG00000009653	PRDM12	91	79.772	ENSSMAG00000003754	prdm12b	90	80.342	Scophthalmus_maximus
ENSUAMG00000009653	PRDM12	94	80.814	ENSSDUG00000019071	-	90	83.486	Seriola_dumerili
ENSUAMG00000009653	PRDM12	95	77.898	ENSSDUG00000023498	prdm12b	90	81.214	Seriola_dumerili
ENSUAMG00000009653	PRDM12	95	78.261	ENSSLDG00000009557	prdm12b	90	81.924	Seriola_lalandi_dorsalis
ENSUAMG00000009653	PRDM12	96	79.943	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSUAMG00000009653	PRDM12	94	92.375	ENSSPUG00000013424	PRDM12	94	93.114	Sphenodon_punctatus
ENSUAMG00000009653	PRDM12	90	81.871	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSUAMG00000009653	PRDM12	90	72.566	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSUAMG00000009653	PRDM12	97	99.140	ENSSSCG00000005703	PRDM12	96	99.140	Sus_scrofa
ENSUAMG00000009653	PRDM12	90	84.036	ENSTRUG00000018659	prdm12b	92	82.405	Takifugu_rubripes
ENSUAMG00000009653	PRDM12	96	77.591	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSUAMG00000009653	PRDM12	96	76.816	ENSTNIG00000005859	-	92	80.909	Tetraodon_nigroviridis
ENSUAMG00000009653	PRDM12	91	83.481	ENSTNIG00000009020	prdm12b	91	83.235	Tetraodon_nigroviridis
ENSUAMG00000009653	PRDM12	92	100.000	ENSVVUG00000027662	PRDM12	79	100.000	Vulpes_vulpes
ENSUAMG00000009653	PRDM12	91	83.036	ENSXCOG00000002836	prdm12b	91	82.596	Xiphophorus_couchianus
ENSUAMG00000009653	PRDM12	91	80.294	ENSXMAG00000028012	-	88	80.294	Xiphophorus_maculatus
ENSUAMG00000009653	PRDM12	91	82.544	ENSXMAG00000005537	prdm12b	91	82.111	Xiphophorus_maculatus