EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSUAMG00000009994 (Gene tree)
Gene ID
-
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Ursus_americanus
Status
putative
Strand
Plus strand
Length
139772 bases
Position
chrLZNR01009244.1:14371-154142
Accession
9349
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSUAMP00000012324zf-C2H2PF00096.265.8e-4517
ENSUAMP00000012324zf-C2H2PF00096.265.8e-4527
ENSUAMP00000012324zf-C2H2PF00096.265.8e-4537
ENSUAMP00000012324zf-C2H2PF00096.265.8e-4547
ENSUAMP00000012324zf-C2H2PF00096.265.8e-4557
ENSUAMP00000012324zf-C2H2PF00096.265.8e-4567
ENSUAMP00000012324zf-C2H2PF00096.265.8e-4577
ENSUAMP00000012325zf-C2H2PF00096.264.8e-3517
ENSUAMP00000012325zf-C2H2PF00096.264.8e-3527
ENSUAMP00000012325zf-C2H2PF00096.264.8e-3537
ENSUAMP00000012325zf-C2H2PF00096.264.8e-3547
ENSUAMP00000012325zf-C2H2PF00096.264.8e-3557
ENSUAMP00000012325zf-C2H2PF00096.264.8e-3567
ENSUAMP00000012325zf-C2H2PF00096.264.8e-3577
ENSUAMP00000012324zf-metPF12874.79.6e-2013
ENSUAMP00000012324zf-metPF12874.79.6e-2023
ENSUAMP00000012324zf-metPF12874.79.6e-2033
ENSUAMP00000012325zf-metPF12874.76.4e-1613
ENSUAMP00000012325zf-metPF12874.76.4e-1623
ENSUAMP00000012325zf-metPF12874.76.4e-1633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSUAMT00000013849PRDM5-2011740-ENSUAMP00000012324579 (aa)--
ENSUAMT00000013850PRDM5-2021188-ENSUAMP00000012325395 (aa)--
Gene Model
Click here to download ENSUAMG00000009994's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000009994's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSUAMG00000009994PRDM56836.879ENSUAMG00000018832PRDM105633.858
ENSUAMG00000009994PRDM57139.545ENSUAMG00000017632ZFP19139.545
ENSUAMG00000009994PRDM56733.010ENSUAMG00000015014PATZ15331.953
ENSUAMG00000009994PRDM56933.645ENSUAMG00000011329ZFAT5333.645
ENSUAMG00000009994PRDM58939.823ENSUAMG00000013694ZNF2349441.964
ENSUAMG00000009994PRDM56240.265ENSUAMG00000013693ZNF2267340.265
ENSUAMG00000009994PRDM56137.156ENSUAMG00000027415-8537.156
ENSUAMG00000009994PRDM57437.255ENSUAMG00000027191-9337.255
ENSUAMG00000009994PRDM56137.970ENSUAMG00000005458ZNF2356940.708
ENSUAMG00000009994PRDM56836.864ENSUAMG00000019652-8736.364
ENSUAMG00000009994PRDM56141.518ENSUAMG00000016706-8736.286
ENSUAMG00000009994PRDM58444.737ENSUAMG00000009653PRDM126842.222
ENSUAMG00000009994PRDM56538.562ENSUAMG00000010469ZNF5827638.562
ENSUAMG00000009994PRDM57140.175ENSUAMG00000028270-9240.175
ENSUAMG00000009994PRDM56939.823ENSUAMG00000004827-5539.823
ENSUAMG00000009994PRDM55731.325ENSUAMG00000019888ZNF7846534.568
ENSUAMG00000009994PRDM56535.789ENSUAMG00000023864ZNF5747135.789
ENSUAMG00000009994PRDM56947.458ENSUAMG00000015472ZNF2367147.458
ENSUAMG00000009994PRDM56138.679ENSUAMG00000001062-9938.679
ENSUAMG00000009994PRDM57539.367ENSUAMG00000004882-7539.367
ENSUAMG00000009994PRDM57534.259ENSUAMG00000014479ZNF3177935.465
ENSUAMG00000009994PRDM56235.556ENSUAMG00000020030SNAI35235.556
ENSUAMG00000009994PRDM56036.364ENSUAMG00000000212-7936.364
ENSUAMG00000009994PRDM56037.611ENSUAMG00000017817-9837.611
ENSUAMG00000009994PRDM56539.367ENSUAMG00000010517-7439.367
ENSUAMG00000009994PRDM56039.381ENSUAMG00000026246ZNF4548139.381
ENSUAMG00000009994PRDM56238.865ENSUAMG00000027381-9638.865
ENSUAMG00000009994PRDM57040.323ENSUAMG00000027384-9139.381
ENSUAMG00000009994PRDM57630.204ENSUAMG00000011794ZNF5265531.325
ENSUAMG00000009994PRDM56736.527ENSUAMG00000024556ZNF6527640.000
ENSUAMG00000009994PRDM56140.659ENSUAMG00000014942SNAI26240.659
ENSUAMG00000009994PRDM56137.313ENSUAMG00000012111ZFP647830.435
ENSUAMG00000009994PRDM57330.000ENSUAMG00000008738ZNF6466530.000
ENSUAMG00000009994PRDM56141.071ENSUAMG00000021858-5441.071
ENSUAMG00000009994PRDM57639.301ENSUAMG00000005918-9039.301
ENSUAMG00000009994PRDM56939.823ENSUAMG00000022172-5439.823
ENSUAMG00000009994PRDM58234.711ENSUAMG00000016827ZNF3198734.711
ENSUAMG00000009994PRDM56336.646ENSUAMG00000004622MAZ7739.623
ENSUAMG00000009994PRDM57939.462ENSUAMG00000012109ZNF6587339.381
ENSUAMG00000009994PRDM56344.828ENSUAMG00000020195ZNF6285944.828
ENSUAMG00000009994PRDM55637.143ENSUAMG00000019189GTF3A7237.500
ENSUAMG00000009994PRDM56140.708ENSUAMG00000014969ZNF1127736.937
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSUAMG00000009994PRDM58496.681ENSG00000138738PRDM59397.436Homo_sapiens
ENSUAMG00000009994PRDM57787.607ENSAPOG00000023220prdm59587.607Acanthochromis_polyacanthus
ENSUAMG00000009994PRDM58092.961ENSAMEG00000003050PRDM59999.127Ailuropoda_melanoleuca
ENSUAMG00000009994PRDM57687.607ENSACIG00000000406prdm59487.607Amphilophus_citrinellus
ENSUAMG00000009994PRDM57687.179ENSAOCG00000014806prdm59587.179Amphiprion_ocellaris
ENSUAMG00000009994PRDM59369.697ENSAPEG00000016846prdm59569.551Amphiprion_percula
ENSUAMG00000009994PRDM57787.607ENSATEG00000013829prdm59587.607Anabas_testudineus
ENSUAMG00000009994PRDM57789.316ENSAPLG00000013828PRDM59989.316Anas_platyrhynchos
ENSUAMG00000009994PRDM57789.316ENSACAG00000012999PRDM59589.316Anolis_carolinensis
ENSUAMG00000009994PRDM58496.581ENSANAG00000027411PRDM59396.581Aotus_nancymaae
ENSUAMG00000009994PRDM57687.607ENSACLG00000017996prdm59587.607Astatotilapia_calliptera
ENSUAMG00000009994PRDM56587.607ENSAMXG00000041864prdm58887.607Astyanax_mexicanus
ENSUAMG00000009994PRDM57797.436ENSBTAG00000012111PRDM59597.436Bos_taurus
ENSUAMG00000009994PRDM58497.009ENSCJAG00000003133PRDM59397.009Callithrix_jacchus
ENSUAMG00000009994PRDM57299.497ENSCAFG00000004179PRDM59998.291Canis_familiaris
ENSUAMG00000009994PRDM58497.325ENSCAFG00020017685PRDM59597.436Canis_lupus_dingo
ENSUAMG00000009994PRDM58495.267ENSCHIG00000018772PRDM59597.436Capra_hircus
ENSUAMG00000009994PRDM58495.354ENSTSYG00000009630PRDM59596.154Carlito_syrichta
ENSUAMG00000009994PRDM58889.706ENSCAPG00000015217PRDM510089.706Cavia_aperea
ENSUAMG00000009994PRDM58496.154ENSCPOG00000012883PRDM59997.351Cavia_porcellus
ENSUAMG00000009994PRDM58497.009ENSCCAG00000023157PRDM59397.009Cebus_capucinus
ENSUAMG00000009994PRDM58497.436ENSCATG00000042510PRDM59299.130Cercocebus_atys
ENSUAMG00000009994PRDM58496.154ENSCLAG00000005392PRDM59997.020Chinchilla_lanigera
ENSUAMG00000009994PRDM58495.679ENSCSAG00000003729PRDM59397.436Chlorocebus_sabaeus
ENSUAMG00000009994PRDM58493.651ENSCHOG00000007801PRDM58581.373Choloepus_hoffmanni
ENSUAMG00000009994PRDM57789.744ENSCPBG00000024735PRDM59589.744Chrysemys_picta_bellii
ENSUAMG00000009994PRDM58497.436ENSCANG00000036807PRDM59397.436Colobus_angolensis_palliatus
ENSUAMG00000009994PRDM58496.154ENSCGRG00001010581Prdm59396.154Cricetulus_griseus_chok1gshd
ENSUAMG00000009994PRDM57895.767ENSCGRG00000010996-9795.767Cricetulus_griseus_crigri
ENSUAMG00000009994PRDM57686.325ENSCSEG00000019979prdm59586.325Cynoglossus_semilaevis
ENSUAMG00000009994PRDM59367.568ENSCVAG00000013692prdm59576.068Cyprinodon_variegatus
ENSUAMG00000009994PRDM57786.325ENSDARG00000006288prdm59586.325Danio_rerio
ENSUAMG00000009994PRDM58089.047ENSDNOG00000002009PRDM59995.745Dasypus_novemcinctus
ENSUAMG00000009994PRDM58496.154ENSDORG00000007739Prdm59197.020Dipodomys_ordii
ENSUAMG00000009994PRDM58488.189ENSETEG00000020268PRDM58888.189Echinops_telfairi
ENSUAMG00000009994PRDM57980.162ENSEBUG00000004301prdm59480.162Eptatretus_burgeri
ENSUAMG00000009994PRDM58497.436ENSEASG00005018365PRDM59597.436Equus_asinus_asinus
ENSUAMG00000009994PRDM59072.099ENSECAG00000024747-9284.488Equus_caballus
ENSUAMG00000009994PRDM58497.495ENSECAG00000011516PRDM58599.559Equus_caballus
ENSUAMG00000009994PRDM57794.444ENSEEUG00000010306PRDM59594.444Erinaceus_europaeus
ENSUAMG00000009994PRDM57788.696ENSELUG00000005894prdm58888.696Esox_lucius
ENSUAMG00000009994PRDM58498.451ENSFCAG00000025656PRDM59597.531Felis_catus
ENSUAMG00000009994PRDM58268.966ENSFALG00000008381PRDM59068.966Ficedula_albicollis
ENSUAMG00000009994PRDM58496.581ENSFDAG00000021361PRDM59396.581Fukomys_damarensis
ENSUAMG00000009994PRDM57687.607ENSFHEG00000013040prdm59587.607Fundulus_heteroclitus
ENSUAMG00000009994PRDM58493.443ENSGMOG00000012038prdm58893.443Gadus_morhua
ENSUAMG00000009994PRDM57788.889ENSGALG00000011963PRDM59588.889Gallus_gallus
ENSUAMG00000009994PRDM59370.833ENSGAFG00000019233prdm59383.806Gambusia_affinis
ENSUAMG00000009994PRDM57791.414ENSGAGG00000020362PRDM59391.414Gopherus_agassizii
ENSUAMG00000009994PRDM58497.436ENSGGOG00000013562PRDM59397.436Gorilla_gorilla
ENSUAMG00000009994PRDM57687.607ENSHBUG00000023375prdm59587.607Haplochromis_burtoni
ENSUAMG00000009994PRDM59483.700ENSHGLG00000003010PRDM59583.700Heterocephalus_glaber_female
ENSUAMG00000009994PRDM58496.154ENSHGLG00100003696PRDM59396.154Heterocephalus_glaber_male
ENSUAMG00000009994PRDM57787.179ENSHCOG00000012131prdm59587.179Hippocampus_comes
ENSUAMG00000009994PRDM57787.607ENSIPUG00000001248prdm59587.607Ictalurus_punctatus
ENSUAMG00000009994PRDM58492.735ENSSTOG00000004741PRDM59994.371Ictidomys_tridecemlineatus
ENSUAMG00000009994PRDM58495.726ENSJJAG00000011464Prdm59995.726Jaculus_jaculus
ENSUAMG00000009994PRDM57687.179ENSKMAG00000013663prdm59587.179Kryptolebias_marmoratus
ENSUAMG00000009994PRDM57787.179ENSLBEG00000022736prdm59587.179Labrus_bergylta
ENSUAMG00000009994PRDM57189.744ENSLACG00000009187PRDM59989.744Latimeria_chalumnae
ENSUAMG00000009994PRDM57786.325ENSLOCG00000009778prdm59586.325Lepisosteus_oculatus
ENSUAMG00000009994PRDM58496.296ENSLAFG00000006532PRDM59597.436Loxodonta_africana
ENSUAMG00000009994PRDM58497.436ENSMFAG00000045845PRDM59299.130Macaca_fascicularis
ENSUAMG00000009994PRDM58497.436ENSMMUG00000003249PRDM59397.436Macaca_mulatta
ENSUAMG00000009994PRDM58497.436ENSMNEG00000019018PRDM59299.130Macaca_nemestrina
ENSUAMG00000009994PRDM58496.460ENSMLEG00000023145PRDM59699.500Mandrillus_leucophaeus
ENSUAMG00000009994PRDM57788.745ENSMAMG00000013419prdm59588.745Mastacembelus_armatus
ENSUAMG00000009994PRDM57687.607ENSMZEG00005020645prdm59587.607Maylandia_zebra
ENSUAMG00000009994PRDM57788.889ENSMGAG00000010710PRDM59988.889Meleagris_gallopavo
ENSUAMG00000009994PRDM58496.154ENSMAUG00000006768Prdm59396.154Mesocricetus_auratus
ENSUAMG00000009994PRDM58596.154ENSMICG00000001459PRDM59496.154Microcebus_murinus
ENSUAMG00000009994PRDM58496.154ENSMOCG00000016267Prdm59396.154Microtus_ochrogaster
ENSUAMG00000009994PRDM57686.325ENSMMOG00000006035prdm59586.325Mola_mola
ENSUAMG00000009994PRDM57688.034ENSMODG00000018942PRDM59588.034Monodelphis_domestica
ENSUAMG00000009994PRDM58573.511ENSMALG00000013934prdm59480.342Monopterus_albus
ENSUAMG00000009994PRDM58496.154MGP_CAROLIEiJ_G0028463Prdm59696.154Mus_caroli
ENSUAMG00000009994PRDM58495.726ENSMUSG00000029913Prdm59395.726Mus_musculus
ENSUAMG00000009994PRDM58496.154MGP_PahariEiJ_G0022203Prdm59396.154Mus_pahari
ENSUAMG00000009994PRDM58495.726MGP_SPRETEiJ_G0029467Prdm59395.726Mus_spretus
ENSUAMG00000009994PRDM58491.683ENSMPUG00000017415PRDM59597.009Mustela_putorius_furo
ENSUAMG00000009994PRDM58282.437ENSMLUG00000006097PRDM59882.437Myotis_lucifugus
ENSUAMG00000009994PRDM58496.581ENSNGAG00000018317Prdm59196.689Nannospalax_galili
ENSUAMG00000009994PRDM59368.421ENSNBRG00000004976prdm59567.987Neolamprologus_brichardi
ENSUAMG00000009994PRDM58497.436ENSNLEG00000009107PRDM59397.436Nomascus_leucogenys
ENSUAMG00000009994PRDM56591.034ENSMEUG00000006576-6591.034Notamacropus_eugenii
ENSUAMG00000009994PRDM58496.198ENSOPRG00000011066-8171.340Ochotona_princeps
ENSUAMG00000009994PRDM58496.581ENSODEG00000009133PRDM59297.351Octodon_degus
ENSUAMG00000009994PRDM57787.607ENSONIG00000003111prdm59587.607Oreochromis_niloticus
ENSUAMG00000009994PRDM57791.457ENSOANG00000015109PRDM59191.457Ornithorhynchus_anatinus
ENSUAMG00000009994PRDM57241.772ENSOANG00000006197-10041.772Ornithorhynchus_anatinus
ENSUAMG00000009994PRDM59282.206ENSOCUG00000013454PRDM59982.944Oryctolagus_cuniculus
ENSUAMG00000009994PRDM57687.179ENSORLG00000016247prdm59587.179Oryzias_latipes
ENSUAMG00000009994PRDM57687.179ENSORLG00020018051prdm59587.179Oryzias_latipes_hni
ENSUAMG00000009994PRDM57687.179ENSORLG00015013760prdm59587.179Oryzias_latipes_hsok
ENSUAMG00000009994PRDM57687.607ENSOMEG00000005143prdm59587.607Oryzias_melastigma
ENSUAMG00000009994PRDM57279.510ENSOGAG00000009996PRDM59779.029Otolemur_garnettii
ENSUAMG00000009994PRDM57797.436ENSOARG00000015473PRDM510099.495Ovis_aries
ENSUAMG00000009994PRDM58496.681ENSPPAG00000043045PRDM510097.436Pan_paniscus
ENSUAMG00000009994PRDM58498.451ENSPPRG00000001020PRDM59597.531Panthera_pardus
ENSUAMG00000009994PRDM58498.230ENSPTIG00000010807PRDM59597.436Panthera_tigris_altaica
ENSUAMG00000009994PRDM58497.436ENSPTRG00000016403PRDM59397.436Pan_troglodytes
ENSUAMG00000009994PRDM58497.436ENSPANG00000023612PRDM59299.130Papio_anubis
ENSUAMG00000009994PRDM59046.964ENSPKIG00000015492prdm59351.992Paramormyrops_kingsleyae
ENSUAMG00000009994PRDM57789.744ENSPSIG00000013505PRDM59589.744Pelodiscus_sinensis
ENSUAMG00000009994PRDM57780.769ENSPMGG00000012622prdm59481.818Periophthalmus_magnuspinnatus
ENSUAMG00000009994PRDM55973.932ENSPMAG00000005248prdm510065.013Petromyzon_marinus
ENSUAMG00000009994PRDM58473.469ENSPFOG00000018630prdm59186.667Poecilia_formosa
ENSUAMG00000009994PRDM57787.607ENSPLAG00000014148prdm59587.607Poecilia_latipinna
ENSUAMG00000009994PRDM57687.607ENSPMEG00000018002prdm59587.607Poecilia_mexicana
ENSUAMG00000009994PRDM57687.607ENSPREG00000018366prdm59587.607Poecilia_reticulata
ENSUAMG00000009994PRDM57797.436ENSPPYG00000015031PRDM59397.436Pongo_abelii
ENSUAMG00000009994PRDM58482.398ENSPCAG00000011671PRDM59985.470Procavia_capensis
ENSUAMG00000009994PRDM58596.154ENSPCOG00000022828PRDM59098.492Propithecus_coquereli
ENSUAMG00000009994PRDM57794.017ENSPVAG00000012309PRDM59994.017Pteropus_vampyrus
ENSUAMG00000009994PRDM57687.607ENSPNYG00000012194prdm59587.607Pundamilia_nyererei
ENSUAMG00000009994PRDM57483.333ENSPNAG00000023191-9983.333Pygocentrus_nattereri
ENSUAMG00000009994PRDM57787.607ENSPNAG00000026181prdm59587.607Pygocentrus_nattereri
ENSUAMG00000009994PRDM58489.506ENSRNOG00000023679Prdm59495.726Rattus_norvegicus
ENSUAMG00000009994PRDM58497.436ENSRBIG00000041307PRDM59497.436Rhinopithecus_bieti
ENSUAMG00000009994PRDM58484.579ENSRROG00000035343PRDM59682.743Rhinopithecus_roxellana
ENSUAMG00000009994PRDM58497.009ENSSBOG00000022100PRDM59397.009Saimiri_boliviensis_boliviensis
ENSUAMG00000009994PRDM56989.868ENSSHAG00000003250PRDM510089.868Sarcophilus_harrisii
ENSUAMG00000009994PRDM57686.752ENSSFOG00015020478prdm59586.752Scleropages_formosus
ENSUAMG00000009994PRDM57787.179ENSSMAG00000018844prdm59587.179Scophthalmus_maximus
ENSUAMG00000009994PRDM57788.362ENSSDUG00000020397prdm59587.607Seriola_dumerili
ENSUAMG00000009994PRDM57787.607ENSSLDG00000013353prdm59587.607Seriola_lalandi_dorsalis
ENSUAMG00000009994PRDM591100.000ENSSARG00000014129-59100.000Sorex_araneus
ENSUAMG00000009994PRDM58983.824ENSSPUG00000009941PRDM59588.462Sphenodon_punctatus
ENSUAMG00000009994PRDM57787.179ENSSPAG00000013866prdm59587.179Stegastes_partitus
ENSUAMG00000009994PRDM58496.914ENSSSCG00000009101PRDM59597.436Sus_scrofa
ENSUAMG00000009994PRDM57789.316ENSTGUG00000001920PRDM59989.316Taeniopygia_guttata
ENSUAMG00000009994PRDM57686.752ENSTRUG00000013850prdm59586.752Takifugu_rubripes
ENSUAMG00000009994PRDM59453.819ENSTNIG00000005901prdm59553.646Tetraodon_nigroviridis
ENSUAMG00000009994PRDM58498.333ENSTBEG00000015386PRDM58598.333Tupaia_belangeri
ENSUAMG00000009994PRDM58490.522ENSTTRG00000010996PRDM59597.009Tursiops_truncatus
ENSUAMG00000009994PRDM58598.778ENSUMAG00000003733PRDM59998.778Ursus_maritimus
ENSUAMG00000009994PRDM58484.913ENSVPAG00000007435PRDM59884.913Vicugna_pacos
ENSUAMG00000009994PRDM58291.485ENSVVUG00000013192PRDM59997.436Vulpes_vulpes
ENSUAMG00000009994PRDM57779.487ENSXETG00000002101prdm59579.487Xenopus_tropicalis
ENSUAMG00000009994PRDM57687.607ENSXCOG00000008567prdm59587.607Xiphophorus_couchianus
ENSUAMG00000009994PRDM58083.806ENSXMAG00000013825prdm59587.607Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us