EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000010045 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 8318 bases
Position: chrLZNR01004479.1:22-8339
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000012410	tRNA_int_end_N2	PF12928.7	1.2e-16	1	1
ENSUAMP00000012408	tRNA_int_end_N2	PF12928.7	7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000013940	TSEN54-201	2098	-	ENSUAMP00000012408	429 (aa)	-	-
ENSUAMT00000013942	TSEN54-202	507	-	ENSUAMP00000012410	168 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000010045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000010045's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000010045	TSEN54	99	84.746	ENSG00000182173	TSEN54	100	93.056	Homo_sapiens
ENSUAMG00000010045	TSEN54	99	42.657	ENSAPOG00000009659	tsen54	99	42.424	Acanthochromis_polyacanthus
ENSUAMG00000010045	TSEN54	100	98.601	ENSAMEG00000009414	TSEN54	81	98.601	Ailuropoda_melanoleuca
ENSUAMG00000010045	TSEN54	58	63.918	ENSACIG00000010899	-	52	63.918	Amphilophus_citrinellus
ENSUAMG00000010045	TSEN54	99	43.056	ENSAOCG00000000152	tsen54	79	42.045	Amphiprion_ocellaris
ENSUAMG00000010045	TSEN54	99	42.361	ENSAPEG00000018931	tsen54	78	41.364	Amphiprion_percula
ENSUAMG00000010045	TSEN54	99	41.531	ENSATEG00000019860	tsen54	81	40.460	Anabas_testudineus
ENSUAMG00000010045	TSEN54	100	49.884	ENSAPLG00000009419	TSEN54	94	49.884	Anas_platyrhynchos
ENSUAMG00000010045	TSEN54	86	62.162	ENSACAG00000006714	TSEN54	81	48.055	Anolis_carolinensis
ENSUAMG00000010045	TSEN54	100	82.558	ENSANAG00000024061	TSEN54	80	82.558	Aotus_nancymaae
ENSUAMG00000010045	TSEN54	99	41.591	ENSACLG00000019800	tsen54	80	41.876	Astatotilapia_calliptera
ENSUAMG00000010045	TSEN54	85	61.268	ENSAMXG00000006546	tsen54	80	43.590	Astyanax_mexicanus
ENSUAMG00000010045	TSEN54	100	84.419	ENSBTAG00000000824	TSEN54	81	84.419	Bos_taurus
ENSUAMG00000010045	TSEN54	100	81.163	ENSCJAG00000014278	TSEN54	80	81.163	Callithrix_jacchus
ENSUAMG00000010045	TSEN54	100	92.093	ENSCAFG00000004798	TSEN54	81	92.093	Canis_familiaris
ENSUAMG00000010045	TSEN54	100	92.093	ENSCAFG00020000312	TSEN54	81	92.093	Canis_lupus_dingo
ENSUAMG00000010045	TSEN54	100	82.326	ENSCHIG00000019908	TSEN54	81	82.558	Capra_hircus
ENSUAMG00000010045	TSEN54	100	81.986	ENSTSYG00000037439	TSEN54	94	81.986	Carlito_syrichta
ENSUAMG00000010045	TSEN54	100	82.184	ENSCPOG00000004630	-	100	82.184	Cavia_porcellus
ENSUAMG00000010045	TSEN54	100	81.860	ENSCCAG00000036624	TSEN54	80	81.860	Cebus_capucinus
ENSUAMG00000010045	TSEN54	100	81.860	ENSCATG00000042877	TSEN54	80	81.860	Cercocebus_atys
ENSUAMG00000010045	TSEN54	100	77.907	ENSCLAG00000002924	TSEN54	80	77.907	Chinchilla_lanigera
ENSUAMG00000010045	TSEN54	100	81.860	ENSCSAG00000004809	TSEN54	81	81.860	Chlorocebus_sabaeus
ENSUAMG00000010045	TSEN54	99	51.276	ENSCPBG00000028071	TSEN54	81	51.508	Chrysemys_picta_bellii
ENSUAMG00000010045	TSEN54	100	80.465	ENSCANG00000028053	TSEN54	100	79.891	Colobus_angolensis_palliatus
ENSUAMG00000010045	TSEN54	100	76.279	ENSCGRG00001020029	Tsen54	81	76.279	Cricetulus_griseus_chok1gshd
ENSUAMG00000010045	TSEN54	100	76.279	ENSCGRG00000016289	Tsen54	96	76.279	Cricetulus_griseus_crigri
ENSUAMG00000010045	TSEN54	99	39.041	ENSCSEG00000020586	tsen54	99	38.073	Cynoglossus_semilaevis
ENSUAMG00000010045	TSEN54	58	57.732	ENSCVAG00000006741	-	74	57.732	Cyprinodon_variegatus
ENSUAMG00000010045	TSEN54	99	43.925	ENSDARG00000036844	tsen54	99	44.159	Danio_rerio
ENSUAMG00000010045	TSEN54	100	82.558	ENSDNOG00000018452	TSEN54	81	82.558	Dasypus_novemcinctus
ENSUAMG00000010045	TSEN54	100	78.140	ENSDORG00000004073	Tsen54	81	78.605	Dipodomys_ordii
ENSUAMG00000010045	TSEN54	99	30.562	ENSEBUG00000005203	TSEN54	79	30.562	Eptatretus_burgeri
ENSUAMG00000010045	TSEN54	100	86.512	ENSEASG00005000579	TSEN54	81	86.512	Equus_asinus_asinus
ENSUAMG00000010045	TSEN54	100	85.814	ENSECAG00000004924	TSEN54	81	85.814	Equus_caballus
ENSUAMG00000010045	TSEN54	100	82.093	ENSEEUG00000008467	TSEN54	94	82.093	Erinaceus_europaeus
ENSUAMG00000010045	TSEN54	99	41.463	ENSELUG00000017703	tsen54	75	41.020	Esox_lucius
ENSUAMG00000010045	TSEN54	100	92.093	ENSFCAG00000023712	TSEN54	81	92.093	Felis_catus
ENSUAMG00000010045	TSEN54	100	49.078	ENSFALG00000001119	TSEN54	81	49.885	Ficedula_albicollis
ENSUAMG00000010045	TSEN54	100	80.465	ENSFDAG00000019090	TSEN54	93	80.465	Fukomys_damarensis
ENSUAMG00000010045	TSEN54	99	43.794	ENSFHEG00000005470	tsen54	80	44.028	Fundulus_heteroclitus
ENSUAMG00000010045	TSEN54	78	45.133	ENSGMOG00000013146	tsen54	73	45.133	Gadus_morhua
ENSUAMG00000010045	TSEN54	100	44.851	ENSGALG00000047163	TSEN54	84	44.851	Gallus_gallus
ENSUAMG00000010045	TSEN54	99	43.619	ENSGAFG00000005111	tsen54	80	44.084	Gambusia_affinis
ENSUAMG00000010045	TSEN54	99	41.230	ENSGACG00000014987	tsen54	82	40.319	Gasterosteus_aculeatus
ENSUAMG00000010045	TSEN54	100	51.826	ENSGAGG00000006825	TSEN54	81	51.598	Gopherus_agassizii
ENSUAMG00000010045	TSEN54	100	81.395	ENSGGOG00000009417	TSEN54	84	81.395	Gorilla_gorilla
ENSUAMG00000010045	TSEN54	83	56.738	ENSHBUG00000018296	tsen54	99	37.002	Haplochromis_burtoni
ENSUAMG00000010045	TSEN54	100	80.930	ENSHGLG00000007979	TSEN54	81	80.930	Heterocephalus_glaber_female
ENSUAMG00000010045	TSEN54	100	80.930	ENSHGLG00100005497	TSEN54	81	80.930	Heterocephalus_glaber_male
ENSUAMG00000010045	TSEN54	99	42.290	ENSHCOG00000007481	tsen54	99	41.355	Hippocampus_comes
ENSUAMG00000010045	TSEN54	99	39.269	ENSIPUG00000000590	tsen54	79	39.269	Ictalurus_punctatus
ENSUAMG00000010045	TSEN54	100	76.047	ENSSTOG00000012883	TSEN54	81	76.047	Ictidomys_tridecemlineatus
ENSUAMG00000010045	TSEN54	100	77.546	ENSJJAG00000007365	Tsen54	81	77.546	Jaculus_jaculus
ENSUAMG00000010045	TSEN54	99	43.946	ENSKMAG00000006944	tsen54	81	43.049	Kryptolebias_marmoratus
ENSUAMG00000010045	TSEN54	80	60.000	ENSLBEG00000004199	tsen54	80	40.596	Labrus_bergylta
ENSUAMG00000010045	TSEN54	100	42.342	ENSLACG00000009497	TSEN54	84	42.342	Latimeria_chalumnae
ENSUAMG00000010045	TSEN54	79	65.414	ENSLOCG00000011191	tsen54	81	44.000	Lepisosteus_oculatus
ENSUAMG00000010045	TSEN54	100	83.256	ENSLAFG00000011655	TSEN54	81	83.256	Loxodonta_africana
ENSUAMG00000010045	TSEN54	100	83.708	ENSMFAG00000000712	TSEN54	100	83.708	Macaca_fascicularis
ENSUAMG00000010045	TSEN54	100	83.146	ENSMMUG00000022123	TSEN54	100	83.146	Macaca_mulatta
ENSUAMG00000010045	TSEN54	100	83.708	ENSMNEG00000029199	TSEN54	100	83.708	Macaca_nemestrina
ENSUAMG00000010045	TSEN54	100	81.860	ENSMLEG00000044168	TSEN54	83	81.860	Mandrillus_leucophaeus
ENSUAMG00000010045	TSEN54	99	41.458	ENSMAMG00000019773	tsen54	80	42.369	Mastacembelus_armatus
ENSUAMG00000010045	TSEN54	99	41.591	ENSMZEG00005000884	tsen54	80	41.876	Maylandia_zebra
ENSUAMG00000010045	TSEN54	100	46.682	ENSMGAG00000009556	TSEN54	81	46.682	Meleagris_gallopavo
ENSUAMG00000010045	TSEN54	100	76.744	ENSMAUG00000016838	Tsen54	81	76.744	Mesocricetus_auratus
ENSUAMG00000010045	TSEN54	100	81.860	ENSMICG00000044012	TSEN54	80	81.860	Microcebus_murinus
ENSUAMG00000010045	TSEN54	100	77.907	ENSMOCG00000021585	Tsen54	81	77.907	Microtus_ochrogaster
ENSUAMG00000010045	TSEN54	88	50.000	ENSMMOG00000020189	tsen54	81	38.673	Mola_mola
ENSUAMG00000010045	TSEN54	100	66.893	ENSMODG00000007438	TSEN54	80	66.893	Monodelphis_domestica
ENSUAMG00000010045	TSEN54	99	40.950	ENSMALG00000020573	tsen54	81	40.455	Monopterus_albus
ENSUAMG00000010045	TSEN54	100	75.116	MGP_CAROLIEiJ_G0017417	Tsen54	81	75.116	Mus_caroli
ENSUAMG00000010045	TSEN54	100	75.814	ENSMUSG00000020781	Tsen54	81	75.814	Mus_musculus
ENSUAMG00000010045	TSEN54	100	74.651	MGP_PahariEiJ_G0018547	Tsen54	81	74.651	Mus_pahari
ENSUAMG00000010045	TSEN54	100	75.814	MGP_SPRETEiJ_G0018262	Tsen54	81	75.814	Mus_spretus
ENSUAMG00000010045	TSEN54	100	91.628	ENSMPUG00000013870	TSEN54	81	91.628	Mustela_putorius_furo
ENSUAMG00000010045	TSEN54	100	84.651	ENSMLUG00000015298	TSEN54	81	84.651	Myotis_lucifugus
ENSUAMG00000010045	TSEN54	100	79.070	ENSNGAG00000015673	Tsen54	81	79.070	Nannospalax_galili
ENSUAMG00000010045	TSEN54	90	88.742	ENSNLEG00000001071	-	99	88.742	Nomascus_leucogenys
ENSUAMG00000010045	TSEN54	100	64.733	ENSMEUG00000011908	TSEN54	91	64.733	Notamacropus_eugenii
ENSUAMG00000010045	TSEN54	100	71.860	ENSOPRG00000012513	TSEN54	80	71.860	Ochotona_princeps
ENSUAMG00000010045	TSEN54	91	81.250	ENSODEG00000010059	-	99	79.885	Octodon_degus
ENSUAMG00000010045	TSEN54	99	41.723	ENSONIG00000009543	tsen54	80	41.270	Oreochromis_niloticus
ENSUAMG00000010045	TSEN54	57	74.737	ENSOANG00000030893	-	66	73.585	Ornithorhynchus_anatinus
ENSUAMG00000010045	TSEN54	100	73.427	ENSOCUG00000009875	TSEN54	79	73.427	Oryctolagus_cuniculus
ENSUAMG00000010045	TSEN54	99	42.488	ENSORLG00000000852	tsen54	80	41.549	Oryzias_latipes
ENSUAMG00000010045	TSEN54	90	56.863	ENSORLG00020018221	tsen54	89	41.315	Oryzias_latipes_hni
ENSUAMG00000010045	TSEN54	93	52.866	ENSORLG00015009413	tsen54	99	52.866	Oryzias_latipes_hsok
ENSUAMG00000010045	TSEN54	99	41.958	ENSOMEG00000014402	tsen54	77	41.026	Oryzias_melastigma
ENSUAMG00000010045	TSEN54	100	76.279	ENSOGAG00000001442	TSEN54	81	76.279	Otolemur_garnettii
ENSUAMG00000010045	TSEN54	100	84.651	ENSOARG00000010361	TSEN54	94	84.651	Ovis_aries
ENSUAMG00000010045	TSEN54	100	80.465	ENSPPAG00000043519	TSEN54	85	80.930	Pan_paniscus
ENSUAMG00000010045	TSEN54	100	91.628	ENSPPRG00000009162	TSEN54	81	91.628	Panthera_pardus
ENSUAMG00000010045	TSEN54	100	90.000	ENSPTIG00000019312	TSEN54	90	90.000	Panthera_tigris_altaica
ENSUAMG00000010045	TSEN54	99	84.746	ENSPTRG00000009646	TSEN54	99	84.746	Pan_troglodytes
ENSUAMG00000010045	TSEN54	99	84.181	ENSPANG00000020133	TSEN54	98	84.181	Papio_anubis
ENSUAMG00000010045	TSEN54	100	45.067	ENSPKIG00000023018	tsen54	100	45.291	Paramormyrops_kingsleyae
ENSUAMG00000010045	TSEN54	99	52.546	ENSPSIG00000012807	TSEN54	99	52.546	Pelodiscus_sinensis
ENSUAMG00000010045	TSEN54	99	33.487	ENSPMGG00000019578	tsen54	84	32.949	Periophthalmus_magnuspinnatus
ENSUAMG00000010045	TSEN54	100	77.907	ENSPEMG00000014857	Tsen54	81	77.907	Peromyscus_maniculatus_bairdii
ENSUAMG00000010045	TSEN54	99	44.495	ENSPFOG00000022740	tsen54	80	44.954	Poecilia_formosa
ENSUAMG00000010045	TSEN54	99	44.573	ENSPLAG00000014847	tsen54	80	45.035	Poecilia_latipinna
ENSUAMG00000010045	TSEN54	99	44.342	ENSPMEG00000022876	tsen54	80	44.804	Poecilia_mexicana
ENSUAMG00000010045	TSEN54	99	43.488	ENSPREG00000013090	tsen54	80	43.023	Poecilia_reticulata
ENSUAMG00000010045	TSEN54	100	74.186	ENSPPYG00000008629	TSEN54	88	75.349	Pongo_abelii
ENSUAMG00000010045	TSEN54	94	70.370	ENSPCAG00000002093	TSEN54	79	70.370	Procavia_capensis
ENSUAMG00000010045	TSEN54	100	86.014	ENSPCOG00000027880	TSEN54	81	86.014	Propithecus_coquereli
ENSUAMG00000010045	TSEN54	100	88.372	ENSPVAG00000008446	TSEN54	81	88.372	Pteropus_vampyrus
ENSUAMG00000010045	TSEN54	99	42.494	ENSPNYG00000010217	tsen54	99	40.972	Pundamilia_nyererei
ENSUAMG00000010045	TSEN54	99	44.037	ENSPNAG00000003770	tsen54	80	44.037	Pygocentrus_nattereri
ENSUAMG00000010045	TSEN54	100	76.512	ENSRNOG00000004598	Tsen54	81	76.512	Rattus_norvegicus
ENSUAMG00000010045	TSEN54	100	81.395	ENSRBIG00000043040	TSEN54	100	80.435	Rhinopithecus_bieti
ENSUAMG00000010045	TSEN54	100	81.395	ENSRROG00000030797	TSEN54	81	81.395	Rhinopithecus_roxellana
ENSUAMG00000010045	TSEN54	100	77.907	ENSSBOG00000013543	TSEN54	79	77.907	Saimiri_boliviensis_boliviensis
ENSUAMG00000010045	TSEN54	100	66.059	ENSSHAG00000018127	TSEN54	80	66.059	Sarcophilus_harrisii
ENSUAMG00000010045	TSEN54	100	44.647	ENSSFOG00015004093	tsen54	100	44.647	Scleropages_formosus
ENSUAMG00000010045	TSEN54	82	57.971	ENSSMAG00000012449	tsen54	96	41.216	Scophthalmus_maximus
ENSUAMG00000010045	TSEN54	99	42.922	ENSSDUG00000021506	tsen54	81	41.743	Seriola_dumerili
ENSUAMG00000010045	TSEN54	99	42.466	ENSSLDG00000016303	tsen54	81	41.284	Seriola_lalandi_dorsalis
ENSUAMG00000010045	TSEN54	78	61.832	ENSSPUG00000008988	TSEN54	77	47.384	Sphenodon_punctatus
ENSUAMG00000010045	TSEN54	71	59.459	ENSSPAG00000008047	tsen54	77	59.459	Stegastes_partitus
ENSUAMG00000010045	TSEN54	99	42.529	ENSSPAG00000008098	-	77	59.459	Stegastes_partitus
ENSUAMG00000010045	TSEN54	100	88.605	ENSSSCG00000036852	TSEN54	90	88.605	Sus_scrofa
ENSUAMG00000010045	TSEN54	100	49.535	ENSTGUG00000008548	TSEN54	94	49.535	Taeniopygia_guttata
ENSUAMG00000010045	TSEN54	88	54.305	ENSTRUG00000004230	tsen54	79	38.642	Takifugu_rubripes
ENSUAMG00000010045	TSEN54	67	64.286	ENSTNIG00000011281	tsen54	81	40.961	Tetraodon_nigroviridis
ENSUAMG00000010045	TSEN54	100	88.631	ENSTTRG00000015828	TSEN54	94	88.631	Tursiops_truncatus
ENSUAMG00000010045	TSEN54	100	99.534	ENSUMAG00000008979	TSEN54	100	99.534	Ursus_maritimus
ENSUAMG00000010045	TSEN54	100	91.628	ENSVVUG00000011411	TSEN54	82	91.628	Vulpes_vulpes
ENSUAMG00000010045	TSEN54	99	44.138	ENSXETG00000012532	tsen54	80	44.138	Xenopus_tropicalis
ENSUAMG00000010045	TSEN54	99	42.396	ENSXCOG00000018245	tsen54	99	42.627	Xiphophorus_couchianus
ENSUAMG00000010045	TSEN54	99	44.780	ENSXMAG00000018818	tsen54	80	45.012	Xiphophorus_maculatus