EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000010266 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 7000 bases
Position: chrLZNR01001716.1:70997-77996
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000012689	ECR1_N	PF14382.6	5e-09	1	1
ENSUAMP00000012688	ECR1_N	PF14382.6	6.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000014251	EXOSC1-202	465	-	ENSUAMP00000012689	154 (aa)	-	-
ENSUAMT00000014250	EXOSC1-201	540	-	ENSUAMP00000012688	179 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000010266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000010266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000010266	EXOSC1	100	83.240	ENSG00000171311	EXOSC1	100	80.000	Homo_sapiens
ENSUAMG00000010266	EXOSC1	98	64.398	ENSAPOG00000007822	exosc1	98	64.398	Acanthochromis_polyacanthus
ENSUAMG00000010266	EXOSC1	100	83.077	ENSAMEG00000000129	EXOSC1	100	83.077	Ailuropoda_melanoleuca
ENSUAMG00000010266	EXOSC1	96	63.298	ENSACIG00000018956	exosc1	92	63.298	Amphilophus_citrinellus
ENSUAMG00000010266	EXOSC1	98	64.398	ENSAOCG00000010699	exosc1	98	64.398	Amphiprion_ocellaris
ENSUAMG00000010266	EXOSC1	91	62.874	ENSAPEG00000012690	exosc1	96	62.874	Amphiprion_percula
ENSUAMG00000010266	EXOSC1	98	67.045	ENSATEG00000018683	exosc1	98	67.045	Anabas_testudineus
ENSUAMG00000010266	EXOSC1	99	70.984	ENSACAG00000002101	EXOSC1	99	70.984	Anolis_carolinensis
ENSUAMG00000010266	EXOSC1	100	84.358	ENSANAG00000034669	EXOSC1	100	84.358	Aotus_nancymaae
ENSUAMG00000010266	EXOSC1	97	67.241	ENSACLG00000021243	exosc1	97	67.241	Astatotilapia_calliptera
ENSUAMG00000010266	EXOSC1	98	68.750	ENSAMXG00000011116	exosc1	98	68.750	Astyanax_mexicanus
ENSUAMG00000010266	EXOSC1	100	84.456	ENSBTAG00000012699	EXOSC1	100	84.456	Bos_taurus
ENSUAMG00000010266	EXOSC1	91	30.102	WBGene00012966	exos-1	90	30.102	Caenorhabditis_elegans
ENSUAMG00000010266	EXOSC1	100	84.358	ENSCJAG00000016586	EXOSC1	100	84.358	Callithrix_jacchus
ENSUAMG00000010266	EXOSC1	100	82.564	ENSCAFG00000009068	EXOSC1	94	82.564	Canis_familiaris
ENSUAMG00000010266	EXOSC1	100	82.564	ENSCAFG00020006002	EXOSC1	94	82.564	Canis_lupus_dingo
ENSUAMG00000010266	EXOSC1	100	82.564	ENSCHIG00000015253	EXOSC1	100	82.564	Capra_hircus
ENSUAMG00000010266	EXOSC1	100	83.871	ENSTSYG00000000760	EXOSC1	100	83.871	Carlito_syrichta
ENSUAMG00000010266	EXOSC1	100	83.799	ENSCPOG00000001173	EXOSC1	100	83.799	Cavia_porcellus
ENSUAMG00000010266	EXOSC1	100	59.355	ENSCCAG00000023986	EXOSC1	100	59.355	Cebus_capucinus
ENSUAMG00000010266	EXOSC1	100	83.240	ENSCATG00000034114	EXOSC1	100	83.240	Cercocebus_atys
ENSUAMG00000010266	EXOSC1	100	84.358	ENSCLAG00000002463	EXOSC1	100	84.358	Chinchilla_lanigera
ENSUAMG00000010266	EXOSC1	100	79.487	ENSCSAG00000005870	EXOSC1	100	79.487	Chlorocebus_sabaeus
ENSUAMG00000010266	EXOSC1	96	68.817	ENSCHOG00000006477	EXOSC1	100	68.817	Choloepus_hoffmanni
ENSUAMG00000010266	EXOSC1	95	47.340	ENSCING00000022734	-	89	47.340	Ciona_intestinalis
ENSUAMG00000010266	EXOSC1	95	49.198	ENSCSAVG00000010865	-	95	49.198	Ciona_savignyi
ENSUAMG00000010266	EXOSC1	100	83.240	ENSCANG00000034159	EXOSC1	100	83.240	Colobus_angolensis_palliatus
ENSUAMG00000010266	EXOSC1	100	84.516	ENSCGRG00001000335	Exosc1	100	84.516	Cricetulus_griseus_chok1gshd
ENSUAMG00000010266	EXOSC1	100	84.516	ENSCGRG00000011602	Exosc1	100	84.516	Cricetulus_griseus_crigri
ENSUAMG00000010266	EXOSC1	97	59.639	ENSCSEG00000007895	exosc1	95	59.639	Cynoglossus_semilaevis
ENSUAMG00000010266	EXOSC1	98	60.714	ENSCVAG00000016748	exosc1	98	60.714	Cyprinodon_variegatus
ENSUAMG00000010266	EXOSC1	98	65.445	ENSDARG00000059841	exosc1	98	65.445	Danio_rerio
ENSUAMG00000010266	EXOSC1	73	76.351	ENSDNOG00000007983	EXOSC1	100	76.351	Dasypus_novemcinctus
ENSUAMG00000010266	EXOSC1	100	83.240	ENSDORG00000016528	Exosc1	100	83.240	Dipodomys_ordii
ENSUAMG00000010266	EXOSC1	94	38.660	FBgn0032346	Csl4	92	38.660	Drosophila_melanogaster
ENSUAMG00000010266	EXOSC1	100	80.513	ENSETEG00000002469	-	100	80.513	Echinops_telfairi
ENSUAMG00000010266	EXOSC1	97	52.332	ENSEBUG00000008164	exosc1	97	52.332	Eptatretus_burgeri
ENSUAMG00000010266	EXOSC1	100	72.872	ENSEASG00005008684	EXOSC1	100	72.872	Equus_asinus_asinus
ENSUAMG00000010266	EXOSC1	50	71.951	ENSECAG00000010621	EXOSC1	51	71.951	Equus_caballus
ENSUAMG00000010266	EXOSC1	100	81.026	ENSEEUG00000005647	EXOSC1	100	81.026	Erinaceus_europaeus
ENSUAMG00000010266	EXOSC1	97	62.424	ENSELUG00000017369	exosc1	97	62.424	Esox_lucius
ENSUAMG00000010266	EXOSC1	100	83.077	ENSFCAG00000040563	EXOSC1	100	80.663	Felis_catus
ENSUAMG00000010266	EXOSC1	100	68.205	ENSFALG00000008450	EXOSC1	100	68.205	Ficedula_albicollis
ENSUAMG00000010266	EXOSC1	100	83.077	ENSFDAG00000000846	EXOSC1	100	83.077	Fukomys_damarensis
ENSUAMG00000010266	EXOSC1	98	60.714	ENSFHEG00000009154	exosc1	98	60.714	Fundulus_heteroclitus
ENSUAMG00000010266	EXOSC1	98	64.398	ENSGMOG00000008993	exosc1	98	64.398	Gadus_morhua
ENSUAMG00000010266	EXOSC1	100	67.059	ENSGALG00000039917	EXOSC1	100	67.059	Gallus_gallus
ENSUAMG00000010266	EXOSC1	98	60.714	ENSGAFG00000010265	exosc1	94	60.714	Gambusia_affinis
ENSUAMG00000010266	EXOSC1	98	64.921	ENSGACG00000018936	exosc1	98	64.921	Gasterosteus_aculeatus
ENSUAMG00000010266	EXOSC1	100	70.256	ENSGAGG00000019192	EXOSC1	100	70.256	Gopherus_agassizii
ENSUAMG00000010266	EXOSC1	100	77.647	ENSGGOG00000003099	EXOSC1	100	77.647	Gorilla_gorilla
ENSUAMG00000010266	EXOSC1	98	64.398	ENSHBUG00000017857	exosc1	98	64.398	Haplochromis_burtoni
ENSUAMG00000010266	EXOSC1	100	85.475	ENSHGLG00000016927	EXOSC1	100	85.475	Heterocephalus_glaber_female
ENSUAMG00000010266	EXOSC1	100	85.475	ENSHGLG00100012208	EXOSC1	100	85.475	Heterocephalus_glaber_male
ENSUAMG00000010266	EXOSC1	98	63.351	ENSHCOG00000019882	exosc1	98	63.351	Hippocampus_comes
ENSUAMG00000010266	EXOSC1	99	66.102	ENSIPUG00000007685	exosc1	99	66.102	Ictalurus_punctatus
ENSUAMG00000010266	EXOSC1	100	84.516	ENSSTOG00000006615	EXOSC1	100	84.516	Ictidomys_tridecemlineatus
ENSUAMG00000010266	EXOSC1	100	82.051	ENSJJAG00000013311	Exosc1	100	82.051	Jaculus_jaculus
ENSUAMG00000010266	EXOSC1	98	63.021	ENSKMAG00000001202	exosc1	81	63.021	Kryptolebias_marmoratus
ENSUAMG00000010266	EXOSC1	98	68.000	ENSLBEG00000011448	exosc1	98	68.000	Labrus_bergylta
ENSUAMG00000010266	EXOSC1	98	66.038	ENSLOCG00000003776	exosc1	99	66.038	Lepisosteus_oculatus
ENSUAMG00000010266	EXOSC1	100	82.051	ENSLAFG00000015983	EXOSC1	100	82.051	Loxodonta_africana
ENSUAMG00000010266	EXOSC1	100	83.240	ENSMFAG00000001493	EXOSC1	100	83.240	Macaca_fascicularis
ENSUAMG00000010266	EXOSC1	100	83.240	ENSMMUG00000020028	EXOSC1	100	83.240	Macaca_mulatta
ENSUAMG00000010266	EXOSC1	100	80.000	ENSMNEG00000029816	EXOSC1	100	80.000	Macaca_nemestrina
ENSUAMG00000010266	EXOSC1	100	83.240	ENSMLEG00000027643	EXOSC1	100	83.240	Mandrillus_leucophaeus
ENSUAMG00000010266	EXOSC1	98	64.921	ENSMAMG00000012200	exosc1	98	64.921	Mastacembelus_armatus
ENSUAMG00000010266	EXOSC1	97	67.241	ENSMZEG00005007042	exosc1	97	67.241	Maylandia_zebra
ENSUAMG00000010266	EXOSC1	100	78.824	ENSMAUG00000020462	-	100	78.824	Mesocricetus_auratus
ENSUAMG00000010266	EXOSC1	100	83.799	ENSMICG00000007664	EXOSC1	100	83.799	Microcebus_murinus
ENSUAMG00000010266	EXOSC1	100	84.516	ENSMOCG00000006004	-	100	84.516	Microtus_ochrogaster
ENSUAMG00000010266	EXOSC1	97	81.522	ENSMOCG00000017124	-	97	81.522	Microtus_ochrogaster
ENSUAMG00000010266	EXOSC1	99	65.730	ENSMMOG00000021403	exosc1	99	65.730	Mola_mola
ENSUAMG00000010266	EXOSC1	100	76.531	ENSMODG00000004213	EXOSC1	100	76.531	Monodelphis_domestica
ENSUAMG00000010266	EXOSC1	94	64.130	ENSMALG00000007061	exosc1	92	64.130	Monopterus_albus
ENSUAMG00000010266	EXOSC1	100	85.161	MGP_CAROLIEiJ_G0022959	Exosc1	100	85.161	Mus_caroli
ENSUAMG00000010266	EXOSC1	100	84.516	ENSMUSG00000034321	Exosc1	100	84.516	Mus_musculus
ENSUAMG00000010266	EXOSC1	100	84.516	MGP_PahariEiJ_G0014449	Exosc1	100	84.516	Mus_pahari
ENSUAMG00000010266	EXOSC1	100	85.161	MGP_SPRETEiJ_G0023880	Exosc1	100	85.161	Mus_spretus
ENSUAMG00000010266	EXOSC1	100	83.077	ENSMPUG00000017044	EXOSC1	100	83.077	Mustela_putorius_furo
ENSUAMG00000010266	EXOSC1	100	81.538	ENSMLUG00000009228	EXOSC1	100	81.538	Myotis_lucifugus
ENSUAMG00000010266	EXOSC1	100	79.487	ENSNGAG00000022033	Exosc1	100	79.487	Nannospalax_galili
ENSUAMG00000010266	EXOSC1	98	67.045	ENSNBRG00000024007	exosc1	98	67.045	Neolamprologus_brichardi
ENSUAMG00000010266	EXOSC1	100	83.240	ENSNLEG00000013872	EXOSC1	100	83.240	Nomascus_leucogenys
ENSUAMG00000010266	EXOSC1	100	81.026	ENSOPRG00000005065	EXOSC1	100	81.026	Ochotona_princeps
ENSUAMG00000010266	EXOSC1	100	84.916	ENSODEG00000016709	EXOSC1	100	84.916	Octodon_degus
ENSUAMG00000010266	EXOSC1	98	64.398	ENSONIG00000017683	exosc1	98	64.398	Oreochromis_niloticus
ENSUAMG00000010266	EXOSC1	53	91.358	ENSOANG00000006563	EXOSC1	64	91.358	Ornithorhynchus_anatinus
ENSUAMG00000010266	EXOSC1	100	75.897	ENSOCUG00000026461	-	100	75.897	Oryctolagus_cuniculus
ENSUAMG00000010266	EXOSC1	100	80.612	ENSOCUG00000011898	-	100	80.612	Oryctolagus_cuniculus
ENSUAMG00000010266	EXOSC1	98	63.542	ENSORLG00000011595	exosc1	98	63.542	Oryzias_latipes
ENSUAMG00000010266	EXOSC1	98	63.542	ENSORLG00020005831	exosc1	98	63.542	Oryzias_latipes_hni
ENSUAMG00000010266	EXOSC1	98	63.542	ENSORLG00015004317	exosc1	98	63.542	Oryzias_latipes_hsok
ENSUAMG00000010266	EXOSC1	98	68.182	ENSOMEG00000013907	exosc1	98	68.182	Oryzias_melastigma
ENSUAMG00000010266	EXOSC1	100	81.026	ENSOGAG00000016259	EXOSC1	100	81.026	Otolemur_garnettii
ENSUAMG00000010266	EXOSC1	100	82.564	ENSOARG00000010136	EXOSC1	100	82.564	Ovis_aries
ENSUAMG00000010266	EXOSC1	100	83.756	ENSPPAG00000039842	EXOSC1	100	83.756	Pan_paniscus
ENSUAMG00000010266	EXOSC1	100	83.077	ENSPPRG00000023366	EXOSC1	100	83.077	Panthera_pardus
ENSUAMG00000010266	EXOSC1	100	83.077	ENSPTIG00000017701	EXOSC1	100	83.077	Panthera_tigris_altaica
ENSUAMG00000010266	EXOSC1	100	83.240	ENSPTRG00000002808	EXOSC1	100	83.240	Pan_troglodytes
ENSUAMG00000010266	EXOSC1	100	83.240	ENSPANG00000021324	EXOSC1	100	83.240	Papio_anubis
ENSUAMG00000010266	EXOSC1	98	65.445	ENSPKIG00000016037	exosc1	98	65.445	Paramormyrops_kingsleyae
ENSUAMG00000010266	EXOSC1	53	90.123	ENSPSIG00000013571	EXOSC1	65	90.123	Pelodiscus_sinensis
ENSUAMG00000010266	EXOSC1	97	59.036	ENSPMGG00000014002	exosc1	98	59.036	Periophthalmus_magnuspinnatus
ENSUAMG00000010266	EXOSC1	100	84.516	ENSPEMG00000010710	-	100	84.516	Peromyscus_maniculatus_bairdii
ENSUAMG00000010266	EXOSC1	95	56.150	ENSPMAG00000000195	exosc1	95	56.150	Petromyzon_marinus
ENSUAMG00000010266	EXOSC1	100	77.436	ENSPCIG00000002210	EXOSC1	99	77.436	Phascolarctos_cinereus
ENSUAMG00000010266	EXOSC1	98	59.898	ENSPFOG00000006755	exosc1	94	59.898	Poecilia_formosa
ENSUAMG00000010266	EXOSC1	98	60.204	ENSPLAG00000005880	exosc1	98	60.204	Poecilia_latipinna
ENSUAMG00000010266	EXOSC1	98	59.898	ENSPMEG00000015598	exosc1	94	59.898	Poecilia_mexicana
ENSUAMG00000010266	EXOSC1	98	56.395	ENSPREG00000000405	exosc1	93	56.395	Poecilia_reticulata
ENSUAMG00000010266	EXOSC1	100	79.487	ENSPPYG00000002531	EXOSC1	100	79.487	Pongo_abelii
ENSUAMG00000010266	EXOSC1	100	81.026	ENSPCAG00000009135	EXOSC1	100	81.026	Procavia_capensis
ENSUAMG00000010266	EXOSC1	100	86.885	ENSPCOG00000027539	EXOSC1	100	86.885	Propithecus_coquereli
ENSUAMG00000010266	EXOSC1	100	82.051	ENSPVAG00000003372	EXOSC1	100	82.051	Pteropus_vampyrus
ENSUAMG00000010266	EXOSC1	98	64.398	ENSPNYG00000021745	exosc1	98	64.398	Pundamilia_nyererei
ENSUAMG00000010266	EXOSC1	98	64.921	ENSPNAG00000001944	exosc1	98	64.921	Pygocentrus_nattereri
ENSUAMG00000010266	EXOSC1	100	84.516	ENSRNOG00000048708	Exosc1	100	84.516	Rattus_norvegicus
ENSUAMG00000010266	EXOSC1	100	83.240	ENSRBIG00000035618	EXOSC1	100	83.240	Rhinopithecus_bieti
ENSUAMG00000010266	EXOSC1	100	83.240	ENSRROG00000032589	EXOSC1	100	83.240	Rhinopithecus_roxellana
ENSUAMG00000010266	EXOSC1	100	82.051	ENSSBOG00000000359	EXOSC1	100	82.051	Saimiri_boliviensis_boliviensis
ENSUAMG00000010266	EXOSC1	53	96.341	ENSSHAG00000018219	EXOSC1	100	72.789	Sarcophilus_harrisii
ENSUAMG00000010266	EXOSC1	98	66.667	ENSSFOG00015009069	exosc1	99	66.667	Scleropages_formosus
ENSUAMG00000010266	EXOSC1	97	62.632	ENSSFOG00015016289	-	98	62.632	Scleropages_formosus
ENSUAMG00000010266	EXOSC1	98	67.614	ENSSMAG00000003721	exosc1	98	67.614	Scophthalmus_maximus
ENSUAMG00000010266	EXOSC1	98	64.921	ENSSDUG00000002993	exosc1	98	64.921	Seriola_dumerili
ENSUAMG00000010266	EXOSC1	98	64.921	ENSSLDG00000025181	exosc1	98	64.921	Seriola_lalandi_dorsalis
ENSUAMG00000010266	EXOSC1	100	68.205	ENSSARG00000000162	EXOSC1	100	68.205	Sorex_araneus
ENSUAMG00000010266	EXOSC1	99	69.388	ENSSPUG00000012263	EXOSC1	99	69.388	Sphenodon_punctatus
ENSUAMG00000010266	EXOSC1	98	62.147	ENSSPAG00000016792	exosc1	82	62.147	Stegastes_partitus
ENSUAMG00000010266	EXOSC1	100	82.051	ENSSSCG00000010518	EXOSC1	91	82.051	Sus_scrofa
ENSUAMG00000010266	EXOSC1	98	65.625	ENSTGUG00000009692	EXOSC1	99	65.625	Taeniopygia_guttata
ENSUAMG00000010266	EXOSC1	97	58.730	ENSTRUG00000007706	exosc1	98	58.730	Takifugu_rubripes
ENSUAMG00000010266	EXOSC1	97	58.333	ENSTNIG00000014079	exosc1	97	58.333	Tetraodon_nigroviridis
ENSUAMG00000010266	EXOSC1	100	73.333	ENSTBEG00000006011	EXOSC1	100	73.333	Tupaia_belangeri
ENSUAMG00000010266	EXOSC1	94	82.065	ENSTTRG00000009887	EXOSC1	100	82.065	Tursiops_truncatus
ENSUAMG00000010266	EXOSC1	100	99.441	ENSUMAG00000022002	EXOSC1	100	99.441	Ursus_maritimus
ENSUAMG00000010266	EXOSC1	100	82.564	ENSVVUG00000023192	EXOSC1	63	82.564	Vulpes_vulpes
ENSUAMG00000010266	EXOSC1	98	65.104	ENSXETG00000003434	exosc1	99	65.104	Xenopus_tropicalis
ENSUAMG00000010266	EXOSC1	52	83.750	ENSXCOG00000014499	exosc1	62	83.750	Xiphophorus_couchianus
ENSUAMG00000010266	EXOSC1	98	56.395	ENSXMAG00000023382	exosc1	93	56.395	Xiphophorus_maculatus