EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000010388 (Gene tree)
Gene ID: -
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 27743 bases
Position: chrLZNR01007156.1:6639-34381
Accession: 30626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000012855	YTH	PF04146.15	2.6e-40	1	1
ENSUAMP00000012854	YTH	PF04146.15	2.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000014430	YTHDC1-202	2756	-	ENSUAMP00000012855	660 (aa)	-	-
ENSUAMT00000014429	YTHDC1-201	2810	-	ENSUAMP00000012854	678 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000010388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000010388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000010388	YTHDC1	100	97.349	ENSG00000083896	YTHDC1	100	94.595	Homo_sapiens
ENSUAMG00000010388	YTHDC1	61	60.241	ENSAPOG00000013997	ythdc1	57	63.221	Acanthochromis_polyacanthus
ENSUAMG00000010388	YTHDC1	100	99.853	ENSAMEG00000005688	YTHDC1	93	99.853	Ailuropoda_melanoleuca
ENSUAMG00000010388	YTHDC1	73	54.309	ENSACIG00000019728	ythdc1	62	60.048	Amphilophus_citrinellus
ENSUAMG00000010388	YTHDC1	61	61.927	ENSAOCG00000000239	ythdc1	59	67.464	Amphiprion_ocellaris
ENSUAMG00000010388	YTHDC1	53	66.391	ENSAPEG00000000618	ythdc1	53	68.946	Amphiprion_percula
ENSUAMG00000010388	YTHDC1	51	67.062	ENSATEG00000023007	ythdc1	59	67.196	Anabas_testudineus
ENSUAMG00000010388	YTHDC1	92	84.640	ENSAPLG00000009921	YTHDC1	86	86.240	Anas_platyrhynchos
ENSUAMG00000010388	YTHDC1	92	83.520	ENSACAG00000009697	YTHDC1	86	83.680	Anolis_carolinensis
ENSUAMG00000010388	YTHDC1	100	97.496	ENSANAG00000001522	YTHDC1	93	97.496	Aotus_nancymaae
ENSUAMG00000010388	YTHDC1	61	60.092	ENSACLG00000019371	ythdc1	59	66.133	Astatotilapia_calliptera
ENSUAMG00000010388	YTHDC1	92	64.377	ENSAMXG00000006978	ythdc1	85	65.055	Astyanax_mexicanus
ENSUAMG00000010388	YTHDC1	100	97.788	ENSBTAG00000015572	YTHDC1	93	97.788	Bos_taurus
ENSUAMG00000010388	YTHDC1	100	97.791	ENSCJAG00000009934	YTHDC1	93	97.791	Callithrix_jacchus
ENSUAMG00000010388	YTHDC1	100	99.411	ENSCAFG00000002821	YTHDC1	93	99.411	Canis_familiaris
ENSUAMG00000010388	YTHDC1	100	99.411	ENSCAFG00020027112	YTHDC1	93	99.411	Canis_lupus_dingo
ENSUAMG00000010388	YTHDC1	92	91.368	ENSCHIG00000004810	YTHDC1	87	91.340	Capra_hircus
ENSUAMG00000010388	YTHDC1	100	97.644	ENSTSYG00000011668	YTHDC1	93	97.644	Carlito_syrichta
ENSUAMG00000010388	YTHDC1	92	66.997	ENSCAPG00000008722	YTHDC1	84	65.635	Cavia_aperea
ENSUAMG00000010388	YTHDC1	100	89.396	ENSCPOG00000010929	YTHDC1	93	89.396	Cavia_porcellus
ENSUAMG00000010388	YTHDC1	100	97.496	ENSCCAG00000035754	YTHDC1	94	97.496	Cebus_capucinus
ENSUAMG00000010388	YTHDC1	100	97.579	ENSCATG00000036320	YTHDC1	93	97.579	Cercocebus_atys
ENSUAMG00000010388	YTHDC1	100	96.218	ENSCLAG00000005482	YTHDC1	94	96.218	Chinchilla_lanigera
ENSUAMG00000010388	YTHDC1	100	97.496	ENSCSAG00000005252	YTHDC1	93	97.496	Chlorocebus_sabaeus
ENSUAMG00000010388	YTHDC1	92	86.880	ENSCPBG00000021965	YTHDC1	90	87.040	Chrysemys_picta_bellii
ENSUAMG00000010388	YTHDC1	100	97.644	ENSCANG00000004769	YTHDC1	93	97.644	Colobus_angolensis_palliatus
ENSUAMG00000010388	YTHDC1	100	95.764	ENSCGRG00001000816	Ythdc1	93	95.764	Cricetulus_griseus_chok1gshd
ENSUAMG00000010388	YTHDC1	100	95.876	ENSCGRG00000009807	Ythdc1	94	95.876	Cricetulus_griseus_crigri
ENSUAMG00000010388	YTHDC1	61	60.793	ENSCSEG00000020404	ythdc1	59	66.667	Cynoglossus_semilaevis
ENSUAMG00000010388	YTHDC1	61	60.089	ENSCVAG00000022349	ythdc1	59	66.506	Cyprinodon_variegatus
ENSUAMG00000010388	YTHDC1	92	63.166	ENSDARG00000051953	ythdc1	58	79.115	Danio_rerio
ENSUAMG00000010388	YTHDC1	100	96.029	ENSDNOG00000004949	YTHDC1	93	96.029	Dasypus_novemcinctus
ENSUAMG00000010388	YTHDC1	100	97.198	ENSDORG00000013045	Ythdc1	94	97.198	Dipodomys_ordii
ENSUAMG00000010388	YTHDC1	76	100.000	ENSETEG00000001878	YTHDC1	63	100.000	Echinops_telfairi
ENSUAMG00000010388	YTHDC1	100	99.264	ENSEASG00005018383	YTHDC1	100	99.264	Equus_asinus_asinus
ENSUAMG00000010388	YTHDC1	100	98.822	ENSECAG00000018303	YTHDC1	100	98.822	Equus_caballus
ENSUAMG00000010388	YTHDC1	100	96.460	ENSEEUG00000015466	YTHDC1	93	96.460	Erinaceus_europaeus
ENSUAMG00000010388	YTHDC1	91	62.303	ENSELUG00000014029	ythdc1	85	62.893	Esox_lucius
ENSUAMG00000010388	YTHDC1	100	99.558	ENSFCAG00000026791	YTHDC1	93	99.558	Felis_catus
ENSUAMG00000010388	YTHDC1	64	89.679	ENSFALG00000006581	YTHDC1	78	97.449	Ficedula_albicollis
ENSUAMG00000010388	YTHDC1	100	96.613	ENSFDAG00000018560	YTHDC1	94	96.613	Fukomys_damarensis
ENSUAMG00000010388	YTHDC1	60	64.539	ENSGMOG00000018815	ythdc1	62	68.085	Gadus_morhua
ENSUAMG00000010388	YTHDC1	92	85.920	ENSGALG00000035906	YTHDC1	80	85.760	Gallus_gallus
ENSUAMG00000010388	YTHDC1	61	63.084	ENSGACG00000015486	ythdc1	57	62.774	Gasterosteus_aculeatus
ENSUAMG00000010388	YTHDC1	92	86.491	ENSGAGG00000007108	YTHDC1	86	85.466	Gopherus_agassizii
ENSUAMG00000010388	YTHDC1	100	97.428	ENSGGOG00000021958	YTHDC1	93	97.428	Gorilla_gorilla
ENSUAMG00000010388	YTHDC1	61	60.092	ENSHBUG00000019288	ythdc1	59	66.133	Haplochromis_burtoni
ENSUAMG00000010388	YTHDC1	100	96.218	ENSHGLG00000006319	-	93	96.218	Heterocephalus_glaber_female
ENSUAMG00000010388	YTHDC1	95	68.487	ENSHGLG00000003239	-	57	77.751	Heterocephalus_glaber_female
ENSUAMG00000010388	YTHDC1	100	95.315	ENSHGLG00100001556	-	94	94.469	Heterocephalus_glaber_male
ENSUAMG00000010388	YTHDC1	95	68.012	ENSHGLG00100008060	-	57	75.297	Heterocephalus_glaber_male
ENSUAMG00000010388	YTHDC1	51	61.972	ENSHCOG00000001520	ythdc1	75	59.352	Hippocampus_comes
ENSUAMG00000010388	YTHDC1	92	66.876	ENSIPUG00000018136	ythdc1	61	84.223	Ictalurus_punctatus
ENSUAMG00000010388	YTHDC1	100	96.361	ENSSTOG00000013652	YTHDC1	93	96.361	Ictidomys_tridecemlineatus
ENSUAMG00000010388	YTHDC1	92	90.429	ENSJJAG00000010268	Ythdc1	87	90.032	Jaculus_jaculus
ENSUAMG00000010388	YTHDC1	61	60.731	ENSKMAG00000006483	ythdc1	85	65.525	Kryptolebias_marmoratus
ENSUAMG00000010388	YTHDC1	60	63.725	ENSLBEG00000020831	ythdc1	65	65.122	Labrus_bergylta
ENSUAMG00000010388	YTHDC1	92	75.199	ENSLACG00000004893	YTHDC1	90	75.436	Latimeria_chalumnae
ENSUAMG00000010388	YTHDC1	92	72.684	ENSLOCG00000003045	ythdc1	84	89.183	Lepisosteus_oculatus
ENSUAMG00000010388	YTHDC1	100	95.051	ENSLAFG00000021592	YTHDC1	92	96.919	Loxodonta_africana
ENSUAMG00000010388	YTHDC1	100	97.579	ENSMFAG00000031927	YTHDC1	93	97.579	Macaca_fascicularis
ENSUAMG00000010388	YTHDC1	100	97.644	ENSMMUG00000002265	YTHDC1	94	97.579	Macaca_mulatta
ENSUAMG00000010388	YTHDC1	100	97.644	ENSMNEG00000033751	YTHDC1	93	97.644	Macaca_nemestrina
ENSUAMG00000010388	YTHDC1	100	97.644	ENSMLEG00000042147	YTHDC1	93	97.644	Mandrillus_leucophaeus
ENSUAMG00000010388	YTHDC1	60	62.350	ENSMAMG00000013122	ythdc1	58	66.587	Mastacembelus_armatus
ENSUAMG00000010388	YTHDC1	61	60.092	ENSMZEG00005023173	ythdc1	59	66.133	Maylandia_zebra
ENSUAMG00000010388	YTHDC1	92	84.000	ENSMGAG00000010391	YTHDC1	85	85.280	Meleagris_gallopavo
ENSUAMG00000010388	YTHDC1	100	92.931	ENSMAUG00000001286	Ythdc1	93	92.931	Mesocricetus_auratus
ENSUAMG00000010388	YTHDC1	100	97.644	ENSMICG00000034640	YTHDC1	93	96.507	Microcebus_murinus
ENSUAMG00000010388	YTHDC1	100	95.764	ENSMOCG00000020201	Ythdc1	93	95.764	Microtus_ochrogaster
ENSUAMG00000010388	YTHDC1	69	58.511	ENSMODG00000009173	-	88	62.319	Monodelphis_domestica
ENSUAMG00000010388	YTHDC1	96	51.380	ENSMODG00000010076	-	60	62.260	Monodelphis_domestica
ENSUAMG00000010388	YTHDC1	92	88.462	ENSMODG00000020754	-	85	88.141	Monodelphis_domestica
ENSUAMG00000010388	YTHDC1	85	69.932	ENSMODG00000014337	-	86	70.960	Monodelphis_domestica
ENSUAMG00000010388	YTHDC1	51	61.176	ENSMODG00000004117	-	92	63.259	Monodelphis_domestica
ENSUAMG00000010388	YTHDC1	54	67.925	ENSMALG00000013412	ythdc1	56	68.857	Monopterus_albus
ENSUAMG00000010388	YTHDC1	92	94.712	MGP_CAROLIEiJ_G0027347	Ythdc1	86	94.071	Mus_caroli
ENSUAMG00000010388	YTHDC1	92	93.429	ENSMUSG00000035851	Ythdc1	86	93.429	Mus_musculus
ENSUAMG00000010388	YTHDC1	92	93.750	MGP_PahariEiJ_G0017126	Ythdc1	86	93.750	Mus_pahari
ENSUAMG00000010388	YTHDC1	92	93.750	MGP_SPRETEiJ_G0028339	Ythdc1	86	93.750	Mus_spretus
ENSUAMG00000010388	YTHDC1	92	72.249	ENSMPUG00000001743	YTHDC1	53	99.739	Mustela_putorius_furo
ENSUAMG00000010388	YTHDC1	100	98.230	ENSMLUG00000016300	YTHDC1	94	98.230	Myotis_lucifugus
ENSUAMG00000010388	YTHDC1	58	91.601	ENSNGAG00000024000	Ythdc1	84	90.314	Nannospalax_galili
ENSUAMG00000010388	YTHDC1	61	60.890	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSUAMG00000010388	YTHDC1	100	95.918	ENSNLEG00000009202	YTHDC1	94	95.918	Nomascus_leucogenys
ENSUAMG00000010388	YTHDC1	76	81.940	ENSMEUG00000007128	YTHDC1	68	81.940	Notamacropus_eugenii
ENSUAMG00000010388	YTHDC1	75	98.017	ENSOPRG00000008986	YTHDC1	69	98.017	Ochotona_princeps
ENSUAMG00000010388	YTHDC1	100	95.575	ENSODEG00000001715	YTHDC1	93	95.575	Octodon_degus
ENSUAMG00000010388	YTHDC1	66	61.656	ENSONIG00000012651	ythdc1	58	69.176	Oreochromis_niloticus
ENSUAMG00000010388	YTHDC1	92	76.814	ENSOANG00000014398	YTHDC1	55	95.443	Ornithorhynchus_anatinus
ENSUAMG00000010388	YTHDC1	92	80.414	ENSOCUG00000015886	YTHDC1	56	95.960	Oryctolagus_cuniculus
ENSUAMG00000010388	YTHDC1	60	61.836	ENSORLG00000030544	ythdc1	61	68.856	Oryzias_latipes
ENSUAMG00000010388	YTHDC1	60	61.111	ENSORLG00020019316	ythdc1	61	68.856	Oryzias_latipes_hni
ENSUAMG00000010388	YTHDC1	60	62.500	ENSOMEG00000000551	ythdc1	61	65.450	Oryzias_melastigma
ENSUAMG00000010388	YTHDC1	100	96.907	ENSOGAG00000003362	YTHDC1	93	96.907	Otolemur_garnettii
ENSUAMG00000010388	YTHDC1	100	97.788	ENSOARG00000008633	YTHDC1	93	97.788	Ovis_aries
ENSUAMG00000010388	YTHDC1	100	97.277	ENSPPAG00000041315	YTHDC1	93	97.277	Pan_paniscus
ENSUAMG00000010388	YTHDC1	100	99.697	ENSPPRG00000011979	YTHDC1	93	99.697	Panthera_pardus
ENSUAMG00000010388	YTHDC1	100	99.394	ENSPTIG00000015527	YTHDC1	94	99.394	Panthera_tigris_altaica
ENSUAMG00000010388	YTHDC1	100	97.277	ENSPTRG00000016105	YTHDC1	93	97.277	Pan_troglodytes
ENSUAMG00000010388	YTHDC1	100	97.579	ENSPANG00000021590	YTHDC1	93	97.579	Papio_anubis
ENSUAMG00000010388	YTHDC1	92	67.767	ENSPKIG00000018497	ythdc1	85	68.025	Paramormyrops_kingsleyae
ENSUAMG00000010388	YTHDC1	92	86.240	ENSPSIG00000002782	YTHDC1	86	86.080	Pelodiscus_sinensis
ENSUAMG00000010388	YTHDC1	50	57.100	ENSPMGG00000000970	-	58	64.189	Periophthalmus_magnuspinnatus
ENSUAMG00000010388	YTHDC1	100	96.171	ENSPEMG00000013850	Ythdc1	94	96.171	Peromyscus_maniculatus_bairdii
ENSUAMG00000010388	YTHDC1	92	88.301	ENSPCIG00000006870	YTHDC1	85	87.981	Phascolarctos_cinereus
ENSUAMG00000010388	YTHDC1	61	60.000	ENSPFOG00000013404	ythdc1	60	65.385	Poecilia_formosa
ENSUAMG00000010388	YTHDC1	65	58.887	ENSPLAG00000011079	ythdc1	85	65.385	Poecilia_latipinna
ENSUAMG00000010388	YTHDC1	61	60.000	ENSPMEG00000009238	ythdc1	60	65.385	Poecilia_mexicana
ENSUAMG00000010388	YTHDC1	61	59.952	ENSPREG00000016973	ythdc1	59	60.302	Poecilia_reticulata
ENSUAMG00000010388	YTHDC1	93	97.634	ENSPPYG00000014726	YTHDC1	100	97.634	Pongo_abelii
ENSUAMG00000010388	YTHDC1	76	88.636	ENSPCAG00000009607	YTHDC1	70	88.182	Procavia_capensis
ENSUAMG00000010388	YTHDC1	100	92.890	ENSPCOG00000019105	YTHDC1	93	91.994	Propithecus_coquereli
ENSUAMG00000010388	YTHDC1	100	95.882	ENSPVAG00000015551	YTHDC1	93	95.882	Pteropus_vampyrus
ENSUAMG00000010388	YTHDC1	61	60.092	ENSPNYG00000011687	ythdc1	59	66.133	Pundamilia_nyererei
ENSUAMG00000010388	YTHDC1	92	68.858	ENSPNAG00000028365	ythdc1	85	68.955	Pygocentrus_nattereri
ENSUAMG00000010388	YTHDC1	92	91.009	ENSRNOG00000001996	Ythdc1	86	91.483	Rattus_norvegicus
ENSUAMG00000010388	YTHDC1	100	96.070	ENSRBIG00000028279	YTHDC1	94	96.070	Rhinopithecus_bieti
ENSUAMG00000010388	YTHDC1	100	97.644	ENSRROG00000035028	YTHDC1	93	97.644	Rhinopithecus_roxellana
ENSUAMG00000010388	YTHDC1	100	97.731	ENSSBOG00000022353	YTHDC1	93	97.731	Saimiri_boliviensis_boliviensis
ENSUAMG00000010388	YTHDC1	92	88.462	ENSSHAG00000002538	YTHDC1	91	88.284	Sarcophilus_harrisii
ENSUAMG00000010388	YTHDC1	91	69.025	ENSSFOG00015003298	ythdc1	60	86.493	Scleropages_formosus
ENSUAMG00000010388	YTHDC1	61	60.762	ENSSMAG00000009086	ythdc1	60	65.747	Scophthalmus_maximus
ENSUAMG00000010388	YTHDC1	60	61.501	ENSSDUG00000022008	ythdc1	59	67.048	Seriola_dumerili
ENSUAMG00000010388	YTHDC1	60	61.501	ENSSLDG00000007926	ythdc1	59	67.048	Seriola_lalandi_dorsalis
ENSUAMG00000010388	YTHDC1	85	99.133	ENSSARG00000010960	YTHDC1	100	99.133	Sorex_araneus
ENSUAMG00000010388	YTHDC1	92	82.643	ENSSPUG00000009357	YTHDC1	89	84.395	Sphenodon_punctatus
ENSUAMG00000010388	YTHDC1	61	62.844	ENSSPAG00000011449	ythdc1	59	67.661	Stegastes_partitus
ENSUAMG00000010388	YTHDC1	100	97.944	ENSSSCG00000035505	YTHDC1	100	96.807	Sus_scrofa
ENSUAMG00000010388	YTHDC1	92	86.080	ENSTGUG00000004452	-	85	85.920	Taeniopygia_guttata
ENSUAMG00000010388	YTHDC1	60	58.199	ENSTRUG00000010142	ythdc1	63	62.590	Takifugu_rubripes
ENSUAMG00000010388	YTHDC1	64	60.738	ENSTNIG00000013243	ythdc1	62	66.047	Tetraodon_nigroviridis
ENSUAMG00000010388	YTHDC1	92	86.699	ENSTBEG00000011546	YTHDC1	85	87.340	Tupaia_belangeri
ENSUAMG00000010388	YTHDC1	100	97.644	ENSTTRG00000005083	YTHDC1	93	97.644	Tursiops_truncatus
ENSUAMG00000010388	YTHDC1	100	84.218	ENSUMAG00000013668	YTHDC1	92	84.218	Ursus_maritimus
ENSUAMG00000010388	YTHDC1	100	97.576	ENSVPAG00000009040	YTHDC1	93	97.576	Vicugna_pacos
ENSUAMG00000010388	YTHDC1	100	99.558	ENSVVUG00000005387	YTHDC1	100	99.558	Vulpes_vulpes
ENSUAMG00000010388	YTHDC1	92	72.222	ENSXETG00000017960	ythdc1	85	70.984	Xenopus_tropicalis
ENSUAMG00000010388	YTHDC1	60	59.629	ENSXMAG00000005196	ythdc1	61	64.908	Xiphophorus_maculatus