EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000010424 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 13177 bases
Position: chrLZNR01003744.1:20978-34154
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000014962	tRNA-synt_1g	PF09334.11	6.5e-11	1	1
ENSUAMP00000014806	tRNA-synt_1g	PF09334.11	6.8e-11	1	1
ENSUAMP00000015098	tRNA-synt_1g	PF09334.11	1.3e-10	1	1
ENSUAMP00000015098	Anticodon_1	PF08264.13	3.6e-33	1	1
ENSUAMP00000014962	Anticodon_1	PF08264.13	2.7e-32	1	1
ENSUAMP00000014806	Anticodon_1	PF08264.13	2.7e-32	1	1
ENSUAMP00000014962	tRNA-synt_1	PF00133.22	3.6e-186	1	2
ENSUAMP00000014962	tRNA-synt_1	PF00133.22	3.6e-186	2	2
ENSUAMP00000014806	tRNA-synt_1	PF00133.22	3.9e-186	1	2
ENSUAMP00000014806	tRNA-synt_1	PF00133.22	3.9e-186	2	2
ENSUAMP00000015098	tRNA-synt_1	PF00133.22	1.3e-185	1	2
ENSUAMP00000015098	tRNA-synt_1	PF00133.22	1.3e-185	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000016774	VARS-202	3768	-	ENSUAMP00000014962	1255 (aa)	-	-
ENSUAMT00000016606	VARS-201	3792	-	ENSUAMP00000014806	1263 (aa)	-	-
ENSUAMT00000016930	VARS-203	3753	-	ENSUAMP00000015098	1250 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000010424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000010424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000010424	VARS	81	48.991	ENSUAMG00000026124	VARS2	99	50.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000010424	VARS	100	91.431	ENSG00000204394	VARS	100	98.851	Homo_sapiens
ENSUAMG00000010424	VARS	98	63.179	ENSAPOG00000020691	vars	99	62.780	Acanthochromis_polyacanthus
ENSUAMG00000010424	VARS	98	63.179	ENSAPOG00000020921	vars	99	62.780	Acanthochromis_polyacanthus
ENSUAMG00000010424	VARS	100	94.187	ENSAMEG00000006417	VARS	100	94.187	Ailuropoda_melanoleuca
ENSUAMG00000010424	VARS	100	63.735	ENSACIG00000013752	vars	100	63.672	Amphilophus_citrinellus
ENSUAMG00000010424	VARS	100	63.424	ENSAOCG00000002447	vars	100	62.383	Amphiprion_ocellaris
ENSUAMG00000010424	VARS	100	63.502	ENSAPEG00000010638	vars	99	63.297	Amphiprion_percula
ENSUAMG00000010424	VARS	100	62.510	ENSATEG00000020219	vars	100	62.353	Anabas_testudineus
ENSUAMG00000010424	VARS	90	68.718	ENSACAG00000029133	-	99	69.091	Anolis_carolinensis
ENSUAMG00000010424	VARS	100	91.588	ENSANAG00000015453	VARS	100	91.588	Aotus_nancymaae
ENSUAMG00000010424	VARS	100	63.166	ENSACLG00000025699	vars	97	63.101	Astatotilapia_calliptera
ENSUAMG00000010424	VARS	94	64.398	ENSAMXG00000017716	vars	95	64.398	Astyanax_mexicanus
ENSUAMG00000010424	VARS	100	91.352	ENSBTAG00000005631	VARS	100	91.352	Bos_taurus
ENSUAMG00000010424	VARS	100	91.431	ENSCJAG00000002604	VARS	100	91.431	Callithrix_jacchus
ENSUAMG00000010424	VARS	100	92.217	ENSCAFG00000000636	VARS	100	92.217	Canis_familiaris
ENSUAMG00000010424	VARS	94	91.946	ENSCAFG00020020790	VARS	96	91.946	Canis_lupus_dingo
ENSUAMG00000010424	VARS	100	91.509	ENSCHIG00000011008	VARS	100	91.569	Capra_hircus
ENSUAMG00000010424	VARS	100	91.038	ENSTSYG00000001567	VARS	100	91.038	Carlito_syrichta
ENSUAMG00000010424	VARS	90	88.101	ENSCAPG00000013736	VARS	98	88.101	Cavia_aperea
ENSUAMG00000010424	VARS	100	88.129	ENSCPOG00000000870	VARS	100	88.129	Cavia_porcellus
ENSUAMG00000010424	VARS	100	91.588	ENSCCAG00000035656	VARS	100	94.349	Cebus_capucinus
ENSUAMG00000010424	VARS	100	91.274	ENSCATG00000022394	VARS	100	91.274	Cercocebus_atys
ENSUAMG00000010424	VARS	88	85.826	ENSCLAG00000009470	VARS	92	85.826	Chinchilla_lanigera
ENSUAMG00000010424	VARS	100	91.352	ENSCSAG00000008784	VARS	100	91.352	Chlorocebus_sabaeus
ENSUAMG00000010424	VARS	76	72.962	ENSCPBG00000007943	VARS	96	72.962	Chrysemys_picta_bellii
ENSUAMG00000010424	VARS	100	91.352	ENSCANG00000033570	VARS	100	91.352	Colobus_angolensis_palliatus
ENSUAMG00000010424	VARS	100	89.230	ENSCGRG00001005686	Vars	100	89.230	Cricetulus_griseus_chok1gshd
ENSUAMG00000010424	VARS	92	83.943	ENSCGRG00000013352	Vars	78	83.943	Cricetulus_griseus_crigri
ENSUAMG00000010424	VARS	100	62.470	ENSCSEG00000019652	vars	100	62.549	Cynoglossus_semilaevis
ENSUAMG00000010424	VARS	100	63.764	ENSCVAG00000022398	vars	100	63.636	Cyprinodon_variegatus
ENSUAMG00000010424	VARS	100	63.191	ENSDARG00000044575	vars	100	63.142	Danio_rerio
ENSUAMG00000010424	VARS	83	90.292	ENSDORG00000016433	Vars	95	90.292	Dipodomys_ordii
ENSUAMG00000010424	VARS	69	84.211	ENSETEG00000003824	VARS	77	84.049	Echinops_telfairi
ENSUAMG00000010424	VARS	50	67.269	ENSEBUG00000007086	vars	84	66.149	Eptatretus_burgeri
ENSUAMG00000010424	VARS	57	58.799	ENSEBUG00000004637	vars	100	59.426	Eptatretus_burgeri
ENSUAMG00000010424	VARS	100	92.531	ENSEASG00005015673	VARS	100	92.531	Equus_asinus_asinus
ENSUAMG00000010424	VARS	100	91.595	ENSECAG00000014620	VARS	100	91.987	Equus_caballus
ENSUAMG00000010424	VARS	83	91.696	ENSEEUG00000004116	VARS	83	91.696	Erinaceus_europaeus
ENSUAMG00000010424	VARS	100	62.789	ENSELUG00000006550	vars	97	62.789	Esox_lucius
ENSUAMG00000010424	VARS	100	92.767	ENSFCAG00000004510	VARS	100	92.767	Felis_catus
ENSUAMG00000010424	VARS	82	87.411	ENSFDAG00000011401	VARS	100	87.335	Fukomys_damarensis
ENSUAMG00000010424	VARS	100	63.997	ENSFHEG00000010672	vars	100	63.869	Fundulus_heteroclitus
ENSUAMG00000010424	VARS	92	64.583	ENSGMOG00000014908	vars	97	64.750	Gadus_morhua
ENSUAMG00000010424	VARS	100	64.125	ENSGAFG00000021630	vars	100	63.997	Gambusia_affinis
ENSUAMG00000010424	VARS	92	64.578	ENSGACG00000009601	vars	98	64.096	Gasterosteus_aculeatus
ENSUAMG00000010424	VARS	53	62.725	ENSGAGG00000006508	-	94	63.293	Gopherus_agassizii
ENSUAMG00000010424	VARS	100	91.431	ENSGGOG00000011364	VARS	100	91.431	Gorilla_gorilla
ENSUAMG00000010424	VARS	100	63.166	ENSHBUG00000017151	vars	97	63.101	Haplochromis_burtoni
ENSUAMG00000010424	VARS	100	86.750	ENSHGLG00000011646	VARS	100	86.651	Heterocephalus_glaber_female
ENSUAMG00000010424	VARS	93	80.586	ENSHGLG00100018062	VARS	100	80.586	Heterocephalus_glaber_male
ENSUAMG00000010424	VARS	99	63.129	ENSHCOG00000012198	vars	99	63.219	Hippocampus_comes
ENSUAMG00000010424	VARS	100	63.658	ENSIPUG00000005218	vars	100	63.608	Ictalurus_punctatus
ENSUAMG00000010424	VARS	100	90.652	ENSSTOG00000013112	VARS	100	90.652	Ictidomys_tridecemlineatus
ENSUAMG00000010424	VARS	100	87.784	ENSJJAG00000019749	-	100	87.568	Jaculus_jaculus
ENSUAMG00000010424	VARS	100	71.542	ENSJJAG00000015343	-	100	71.940	Jaculus_jaculus
ENSUAMG00000010424	VARS	100	63.253	ENSKMAG00000009455	vars	100	63.253	Kryptolebias_marmoratus
ENSUAMG00000010424	VARS	100	62.077	ENSLBEG00000010341	vars	100	62.334	Labrus_bergylta
ENSUAMG00000010424	VARS	94	62.592	ENSLACG00000015232	VARS	99	62.490	Latimeria_chalumnae
ENSUAMG00000010424	VARS	100	64.692	ENSLOCG00000004240	vars	100	64.770	Lepisosteus_oculatus
ENSUAMG00000010424	VARS	100	90.376	ENSLAFG00000023090	VARS	100	90.063	Loxodonta_africana
ENSUAMG00000010424	VARS	100	91.274	ENSMFAG00000001032	VARS	100	91.274	Macaca_fascicularis
ENSUAMG00000010424	VARS	100	91.274	ENSMMUG00000006828	VARS	100	91.274	Macaca_mulatta
ENSUAMG00000010424	VARS	100	91.274	ENSMNEG00000042072	VARS	100	91.274	Macaca_nemestrina
ENSUAMG00000010424	VARS	100	91.352	ENSMLEG00000039307	VARS	100	91.352	Mandrillus_leucophaeus
ENSUAMG00000010424	VARS	100	63.178	ENSMAMG00000003949	vars	100	63.170	Mastacembelus_armatus
ENSUAMG00000010424	VARS	100	63.166	ENSMZEG00005018327	vars	100	62.774	Maylandia_zebra
ENSUAMG00000010424	VARS	100	88.994	ENSMAUG00000006715	Vars	100	88.994	Mesocricetus_auratus
ENSUAMG00000010424	VARS	100	90.409	ENSMICG00000003548	VARS	100	93.366	Microcebus_murinus
ENSUAMG00000010424	VARS	100	85.446	ENSMOCG00000015404	Vars	100	85.625	Microtus_ochrogaster
ENSUAMG00000010424	VARS	100	62.882	ENSMMOG00000015801	vars	100	62.725	Mola_mola
ENSUAMG00000010424	VARS	100	82.942	ENSMODG00000015204	-	100	82.942	Monodelphis_domestica
ENSUAMG00000010424	VARS	99	63.170	ENSMALG00000022532	vars	99	63.052	Monopterus_albus
ENSUAMG00000010424	VARS	100	89.358	MGP_CAROLIEiJ_G0021491	Vars	100	89.072	Mus_caroli
ENSUAMG00000010424	VARS	100	89.202	ENSMUSG00000007029	Vars	100	88.915	Mus_musculus
ENSUAMG00000010424	VARS	100	88.698	MGP_PahariEiJ_G0020486	Vars	100	88.522	Mus_pahari
ENSUAMG00000010424	VARS	100	89.280	MGP_SPRETEiJ_G0022396	Vars	100	88.994	Mus_spretus
ENSUAMG00000010424	VARS	100	93.396	ENSMPUG00000010821	VARS	100	93.396	Mustela_putorius_furo
ENSUAMG00000010424	VARS	78	90.130	ENSMLUG00000013126	VARS	100	90.149	Myotis_lucifugus
ENSUAMG00000010424	VARS	100	88.365	ENSNGAG00000012151	Vars	100	88.758	Nannospalax_galili
ENSUAMG00000010424	VARS	100	63.089	ENSNBRG00000020520	vars	100	63.023	Neolamprologus_brichardi
ENSUAMG00000010424	VARS	100	90.802	ENSNLEG00000006351	VARS	100	90.802	Nomascus_leucogenys
ENSUAMG00000010424	VARS	95	84.689	ENSMEUG00000011378	VARS	95	84.689	Notamacropus_eugenii
ENSUAMG00000010424	VARS	100	89.623	ENSOPRG00000003607	VARS	100	89.623	Ochotona_princeps
ENSUAMG00000010424	VARS	100	87.264	ENSODEG00000017681	VARS	100	86.953	Octodon_degus
ENSUAMG00000010424	VARS	100	62.886	ENSONIG00000013064	vars	99	66.262	Oreochromis_niloticus
ENSUAMG00000010424	VARS	77	75.445	ENSOANG00000005400	VARS	98	74.733	Ornithorhynchus_anatinus
ENSUAMG00000010424	VARS	100	87.940	ENSOCUG00000022463	VARS	100	88.038	Oryctolagus_cuniculus
ENSUAMG00000010424	VARS	100	63.482	ENSORLG00000013063	vars	100	63.405	Oryzias_latipes
ENSUAMG00000010424	VARS	100	63.713	ENSORLG00020003504	vars	100	64.081	Oryzias_latipes_hni
ENSUAMG00000010424	VARS	100	63.981	ENSORLG00015009001	vars	100	63.904	Oryzias_latipes_hsok
ENSUAMG00000010424	VARS	100	63.629	ENSOMEG00000015016	vars	100	63.552	Oryzias_melastigma
ENSUAMG00000010424	VARS	100	90.495	ENSOGAG00000007515	VARS	100	90.495	Otolemur_garnettii
ENSUAMG00000010424	VARS	100	91.667	ENSPPAG00000034012	VARS	100	91.667	Pan_paniscus
ENSUAMG00000010424	VARS	100	92.925	ENSPPRG00000014855	VARS	100	92.925	Panthera_pardus
ENSUAMG00000010424	VARS	85	92.435	ENSPTIG00000010462	VARS	95	92.532	Panthera_tigris_altaica
ENSUAMG00000010424	VARS	100	91.588	ENSPTRG00000017985	VARS	100	91.588	Pan_troglodytes
ENSUAMG00000010424	VARS	100	89.734	ENSPANG00000014565	VARS	100	89.734	Papio_anubis
ENSUAMG00000010424	VARS	100	62.519	ENSPKIG00000016304	vars	100	62.394	Paramormyrops_kingsleyae
ENSUAMG00000010424	VARS	100	63.686	ENSPMGG00000023909	vars	100	63.765	Periophthalmus_magnuspinnatus
ENSUAMG00000010424	VARS	100	89.780	ENSPEMG00000006639	Vars	100	89.780	Peromyscus_maniculatus_bairdii
ENSUAMG00000010424	VARS	100	82.707	ENSPCIG00000018553	VARS	100	82.707	Phascolarctos_cinereus
ENSUAMG00000010424	VARS	100	64.358	ENSPFOG00000015690	vars	100	64.230	Poecilia_formosa
ENSUAMG00000010424	VARS	100	64.436	ENSPLAG00000009590	vars	100	64.308	Poecilia_latipinna
ENSUAMG00000010424	VARS	100	64.358	ENSPMEG00000004708	vars	100	64.230	Poecilia_mexicana
ENSUAMG00000010424	VARS	100	62.382	ENSPREG00000013264	vars	100	62.382	Poecilia_reticulata
ENSUAMG00000010424	VARS	100	89.780	ENSPPYG00000016460	VARS	100	89.780	Pongo_abelii
ENSUAMG00000010424	VARS	87	91.637	ENSPCAG00000013565	VARS	86	91.637	Procavia_capensis
ENSUAMG00000010424	VARS	100	90.338	ENSPCOG00000010942	VARS	100	90.731	Propithecus_coquereli
ENSUAMG00000010424	VARS	100	87.343	ENSPVAG00000012403	VARS	100	87.343	Pteropus_vampyrus
ENSUAMG00000010424	VARS	100	63.166	ENSPNYG00000022511	vars	100	63.101	Pundamilia_nyererei
ENSUAMG00000010424	VARS	100	63.390	ENSPNAG00000020962	vars	100	63.313	Pygocentrus_nattereri
ENSUAMG00000010424	VARS	100	89.623	ENSRNOG00000000867	Vars	100	89.623	Rattus_norvegicus
ENSUAMG00000010424	VARS	100	91.431	ENSRBIG00000041669	VARS	100	91.431	Rhinopithecus_bieti
ENSUAMG00000010424	VARS	100	91.431	ENSRROG00000045490	VARS	100	91.431	Rhinopithecus_roxellana
ENSUAMG00000010424	VARS	100	91.195	ENSSBOG00000035402	VARS	100	91.195	Saimiri_boliviensis_boliviensis
ENSUAMG00000010424	VARS	100	78.298	ENSSHAG00000006937	VARS	100	78.532	Sarcophilus_harrisii
ENSUAMG00000010424	VARS	100	62.722	ENSSFOG00015014272	vars	97	69.706	Scleropages_formosus
ENSUAMG00000010424	VARS	100	62.189	ENSSMAG00000009596	vars	99	62.074	Scophthalmus_maximus
ENSUAMG00000010424	VARS	100	62.888	ENSSDUG00000014177	vars	100	62.848	Seriola_dumerili
ENSUAMG00000010424	VARS	100	62.733	ENSSLDG00000025316	vars	100	62.693	Seriola_lalandi_dorsalis
ENSUAMG00000010424	VARS	100	63.658	ENSSPAG00000017068	vars	100	63.502	Stegastes_partitus
ENSUAMG00000010424	VARS	100	89.709	ENSSSCG00000038950	VARS	100	90.102	Sus_scrofa
ENSUAMG00000010424	VARS	82	65.146	ENSTRUG00000012307	vars	96	65.058	Takifugu_rubripes
ENSUAMG00000010424	VARS	100	63.432	ENSTNIG00000008011	vars	100	63.346	Tetraodon_nigroviridis
ENSUAMG00000010424	VARS	52	97.034	ENSTBEG00000004728	-	57	97.034	Tupaia_belangeri
ENSUAMG00000010424	VARS	100	82.940	ENSTTRG00000014128	VARS	100	82.940	Tursiops_truncatus
ENSUAMG00000010424	VARS	100	92.277	ENSUMAG00000013486	VARS	99	96.947	Ursus_maritimus
ENSUAMG00000010424	VARS	100	91.987	ENSVVUG00000021323	VARS	100	91.752	Vulpes_vulpes
ENSUAMG00000010424	VARS	96	61.031	ENSXETG00000024076	vars	98	60.435	Xenopus_tropicalis
ENSUAMG00000010424	VARS	100	63.162	ENSXCOG00000019172	vars	100	63.105	Xiphophorus_couchianus
ENSUAMG00000010424	VARS	100	64.047	ENSXMAG00000010927	vars	100	63.919	Xiphophorus_maculatus