EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000010517 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 3113 bases
Position: chrLZNR01014864.1:23945-27057
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000013035	zf-C2H2	PF00096.26	2.3e-61	1	10
ENSUAMP00000013035	zf-C2H2	PF00096.26	2.3e-61	2	10
ENSUAMP00000013035	zf-C2H2	PF00096.26	2.3e-61	3	10
ENSUAMP00000013035	zf-C2H2	PF00096.26	2.3e-61	4	10
ENSUAMP00000013035	zf-C2H2	PF00096.26	2.3e-61	5	10
ENSUAMP00000013035	zf-C2H2	PF00096.26	2.3e-61	6	10
ENSUAMP00000013035	zf-C2H2	PF00096.26	2.3e-61	7	10
ENSUAMP00000013035	zf-C2H2	PF00096.26	2.3e-61	8	10
ENSUAMP00000013035	zf-C2H2	PF00096.26	2.3e-61	9	10
ENSUAMP00000013035	zf-C2H2	PF00096.26	2.3e-61	10	10
ENSUAMP00000013035	zf-met	PF12874.7	0.00028	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000014625	-	2698	-	ENSUAMP00000013035	548 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000010517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000010517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000010517	-	72	37.383	ENSUAMG00000012111	ZFP64	69	32.948
ENSUAMG00000010517	-	74	48.691	ENSUAMG00000020195	ZNF628	57	48.454
ENSUAMG00000010517	-	67	43.810	ENSUAMG00000026603	SNAI1	98	44.118
ENSUAMG00000010517	-	88	44.173	ENSUAMG00000005918	-	95	41.330
ENSUAMG00000010517	-	67	38.732	ENSUAMG00000014942	SNAI2	61	38.732
ENSUAMG00000010517	-	96	45.683	ENSUAMG00000017632	ZFP1	86	45.683
ENSUAMG00000010517	-	77	38.393	ENSUAMG00000015472	ZNF236	69	38.889
ENSUAMG00000010517	-	93	42.194	ENSUAMG00000017817	-	100	42.194
ENSUAMG00000010517	-	66	47.653	ENSUAMG00000022172	-	53	47.653
ENSUAMG00000010517	-	67	38.393	ENSUAMG00000024556	ZNF652	80	38.393
ENSUAMG00000010517	-	74	35.097	ENSUAMG00000016827	ZNF319	85	35.000
ENSUAMG00000010517	-	89	44.444	ENSUAMG00000028270	-	91	44.904
ENSUAMG00000010517	-	66	47.321	ENSUAMG00000021858	-	61	47.321
ENSUAMG00000010517	-	99	45.777	ENSUAMG00000027384	-	91	45.777
ENSUAMG00000010517	-	90	45.029	ENSUAMG00000027381	-	97	44.072
ENSUAMG00000010517	-	87	49.315	ENSUAMG00000001062	-	99	49.315
ENSUAMG00000010517	-	86	49.772	ENSUAMG00000027415	-	85	49.772
ENSUAMG00000010517	-	84	43.020	ENSUAMG00000026246	ZNF454	88	43.020
ENSUAMG00000010517	-	66	49.187	ENSUAMG00000004827	-	54	49.187
ENSUAMG00000010517	-	87	45.769	ENSUAMG00000014479	ZNF317	73	45.769
ENSUAMG00000010517	-	65	34.221	ENSUAMG00000019189	GTF3A	78	37.079
ENSUAMG00000010517	-	88	40.143	ENSUAMG00000014969	ZNF112	77	40.143
ENSUAMG00000010517	-	74	39.367	ENSUAMG00000009994	PRDM5	65	39.367
ENSUAMG00000010517	-	87	44.722	ENSUAMG00000013693	ZNF226	77	42.222
ENSUAMG00000010517	-	95	41.176	ENSUAMG00000013694	ZNF234	96	40.852
ENSUAMG00000010517	-	66	39.024	ENSUAMG00000015024	ZNF770	80	39.024
ENSUAMG00000010517	-	87	41.389	ENSUAMG00000000212	-	79	41.389
ENSUAMG00000010517	-	76	34.943	ENSUAMG00000023864	ZNF574	73	34.943
ENSUAMG00000010517	-	63	39.416	ENSUAMG00000004622	MAZ	78	36.047
ENSUAMG00000010517	-	86	37.209	ENSUAMG00000008738	ZNF646	88	37.209
ENSUAMG00000010517	-	61	39.286	ENSUAMG00000019888	ZNF784	70	36.404
ENSUAMG00000010517	-	75	46.667	ENSUAMG00000004882	-	71	46.667
ENSUAMG00000010517	-	74	44.382	ENSUAMG00000016706	-	89	44.382
ENSUAMG00000010517	-	66	37.241	ENSUAMG00000011794	ZNF526	81	36.824
ENSUAMG00000010517	-	88	41.309	ENSUAMG00000012109	ZNF658	78	41.309
ENSUAMG00000010517	-	90	40.568	ENSUAMG00000019652	-	84	40.568
ENSUAMG00000010517	-	87	44.068	ENSUAMG00000027191	-	71	44.068
ENSUAMG00000010517	-	65	43.137	ENSUAMG00000020030	SNAI3	61	43.137
ENSUAMG00000010517	-	76	41.961	ENSUAMG00000005458	ZNF235	69	41.961
ENSUAMG00000010517	-	85	43.519	ENSUAMG00000010469	ZNF582	76	44.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000010517	-	97	36.636	ENSETEG00000018209	-	96	36.636	Echinops_telfairi
ENSUAMG00000010517	-	97	57.669	ENSMPUG00000006593	-	86	57.669	Mustela_putorius_furo
ENSUAMG00000010517	-	66	52.137	ENSPEMG00000015555	BC025920	96	52.137	Peromyscus_maniculatus_bairdii
ENSUAMG00000010517	-	97	41.946	ENSTTRG00000017233	-	99	41.946	Tursiops_truncatus
ENSUAMG00000010517	-	90	46.275	ENSUMAG00000007135	-	96	46.275	Ursus_maritimus
ENSUAMG00000010517	-	100	99.818	ENSUMAG00000007151	-	100	99.818	Ursus_maritimus