EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000011021 (Gene tree)
Gene ID: -
Gene Symbol: YTHDF1
Alias: C20orf21|FLJ20391
Full Name: YTH N6-methyladenosine RNA binding protein 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 10882 bases
Position: chrLZNR01003073.1:17478-28359
Accession: 15867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000013718	YTH	PF04146.15	5.1e-42	1	1
ENSUAMP00000013717	YTH	PF04146.15	6.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000015379	YTHDF1-201	1903	-	ENSUAMP00000013717	561 (aa)	-	-
ENSUAMT00000015380	YTHDF1-202	2273	-	ENSUAMP00000013718	509 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000011021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000011021's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000011021	YTHDF1	100	92.927	ENSG00000149658	YTHDF1	97	93.173	Homo_sapiens
ENSUAMG00000011021	YTHDF1	96	73.581	ENSAPOG00000004358	ythdf1	94	74.229	Acanthochromis_polyacanthus
ENSUAMG00000011021	YTHDF1	100	75.985	ENSAPOG00000010796	YTHDF1	97	74.513	Acanthochromis_polyacanthus
ENSUAMG00000011021	YTHDF1	100	99.214	ENSAMEG00000017323	YTHDF1	96	99.262	Ailuropoda_melanoleuca
ENSUAMG00000011021	YTHDF1	96	71.856	ENSACIG00000011264	ythdf1	95	69.821	Amphilophus_citrinellus
ENSUAMG00000011021	YTHDF1	100	75.947	ENSACIG00000020083	YTHDF1	97	75.671	Amphilophus_citrinellus
ENSUAMG00000011021	YTHDF1	99	71.403	ENSAOCG00000022251	ythdf1	96	73.455	Amphiprion_ocellaris
ENSUAMG00000011021	YTHDF1	100	75.285	ENSAOCG00000012567	YTHDF1	97	75.134	Amphiprion_ocellaris
ENSUAMG00000011021	YTHDF1	100	75.475	ENSAPEG00000008750	YTHDF1	97	75.313	Amphiprion_percula
ENSUAMG00000011021	YTHDF1	96	71.457	ENSATEG00000023840	ythdf1	96	72.810	Anabas_testudineus
ENSUAMG00000011021	YTHDF1	100	74.095	ENSATEG00000005996	YTHDF1	98	74.028	Anabas_testudineus
ENSUAMG00000011021	YTHDF1	100	89.824	ENSAPLG00000005985	YTHDF1	97	88.419	Anas_platyrhynchos
ENSUAMG00000011021	YTHDF1	100	85.686	ENSACAG00000005560	YTHDF1	97	86.372	Anolis_carolinensis
ENSUAMG00000011021	YTHDF1	100	91.945	ENSANAG00000034786	-	100	91.945	Aotus_nancymaae
ENSUAMG00000011021	YTHDF1	99	78.107	ENSANAG00000021022	-	97	78.782	Aotus_nancymaae
ENSUAMG00000011021	YTHDF1	100	75.665	ENSACLG00000025518	YTHDF1	97	75.357	Astatotilapia_calliptera
ENSUAMG00000011021	YTHDF1	100	91.159	ENSBTAG00000010383	YTHDF1	100	91.159	Bos_taurus
ENSUAMG00000011021	YTHDF1	100	92.338	ENSCJAG00000010056	YTHDF1	97	92.435	Callithrix_jacchus
ENSUAMG00000011021	YTHDF1	99	97.638	ENSCAFG00000012772	YTHDF1	99	97.638	Canis_familiaris
ENSUAMG00000011021	YTHDF1	99	97.638	ENSCAFG00020001214	YTHDF1	99	97.638	Canis_lupus_dingo
ENSUAMG00000011021	YTHDF1	100	90.570	ENSCHIG00000026494	YTHDF1	98	91.144	Capra_hircus
ENSUAMG00000011021	YTHDF1	100	93.713	ENSTSYG00000033436	YTHDF1	97	94.096	Carlito_syrichta
ENSUAMG00000011021	YTHDF1	99	91.913	ENSCAPG00000002544	YTHDF1	93	90.959	Cavia_aperea
ENSUAMG00000011021	YTHDF1	100	92.534	ENSCPOG00000010202	YTHDF1	97	92.435	Cavia_porcellus
ENSUAMG00000011021	YTHDF1	100	92.338	ENSCCAG00000024650	YTHDF1	97	92.435	Cebus_capucinus
ENSUAMG00000011021	YTHDF1	100	93.320	ENSCATG00000033272	YTHDF1	97	93.542	Cercocebus_atys
ENSUAMG00000011021	YTHDF1	99	92.534	ENSCLAG00000005989	YTHDF1	98	91.160	Chinchilla_lanigera
ENSUAMG00000011021	YTHDF1	100	93.320	ENSCSAG00000016266	YTHDF1	97	93.542	Chlorocebus_sabaeus
ENSUAMG00000011021	YTHDF1	100	90.588	ENSCPBG00000027183	YTHDF1	97	88.214	Chrysemys_picta_bellii
ENSUAMG00000011021	YTHDF1	100	93.124	ENSCANG00000029082	YTHDF1	97	93.358	Colobus_angolensis_palliatus
ENSUAMG00000011021	YTHDF1	100	92.927	ENSCGRG00001016568	Ythdf1	97	93.173	Cricetulus_griseus_chok1gshd
ENSUAMG00000011021	YTHDF1	100	92.927	ENSCGRG00000009207	Ythdf1	99	93.173	Cricetulus_griseus_crigri
ENSUAMG00000011021	YTHDF1	96	71.687	ENSCSEG00000020623	YTHDF1	96	74.115	Cynoglossus_semilaevis
ENSUAMG00000011021	YTHDF1	100	73.245	ENSCVAG00000014378	YTHDF1	100	74.377	Cyprinodon_variegatus
ENSUAMG00000011021	YTHDF1	98	71.429	ENSCVAG00000017940	ythdf1	95	72.542	Cyprinodon_variegatus
ENSUAMG00000011021	YTHDF1	100	89.391	ENSDNOG00000043590	YTHDF1	97	89.852	Dasypus_novemcinctus
ENSUAMG00000011021	YTHDF1	100	91.552	ENSDORG00000002879	Ythdf1	97	90.909	Dipodomys_ordii
ENSUAMG00000011021	YTHDF1	77	64.828	ENSETEG00000017860	-	96	67.669	Echinops_telfairi
ENSUAMG00000011021	YTHDF1	100	96.267	ENSEASG00005023186	YTHDF1	97	96.125	Equus_asinus_asinus
ENSUAMG00000011021	YTHDF1	100	96.071	ENSECAG00000019475	YTHDF1	100	96.071	Equus_caballus
ENSUAMG00000011021	YTHDF1	100	93.320	ENSEEUG00000007461	YTHDF1	100	93.398	Erinaceus_europaeus
ENSUAMG00000011021	YTHDF1	100	73.814	ENSELUG00000001906	YTHDF1	99	73.148	Esox_lucius
ENSUAMG00000011021	YTHDF1	100	96.267	ENSFCAG00000008917	YTHDF1	97	96.494	Felis_catus
ENSUAMG00000011021	YTHDF1	100	91.373	ENSFALG00000010463	YTHDF1	97	88.214	Ficedula_albicollis
ENSUAMG00000011021	YTHDF1	100	92.141	ENSFDAG00000019602	YTHDF1	97	92.251	Fukomys_damarensis
ENSUAMG00000011021	YTHDF1	98	72.340	ENSFHEG00000023218	ythdf1	97	71.140	Fundulus_heteroclitus
ENSUAMG00000011021	YTHDF1	100	74.432	ENSFHEG00000002540	YTHDF1	100	74.199	Fundulus_heteroclitus
ENSUAMG00000011021	YTHDF1	84	89.231	ENSGMOG00000019610	ythdf1	79	82.775	Gadus_morhua
ENSUAMG00000011021	YTHDF1	100	89.628	ENSGALG00000005745	YTHDF1	100	87.867	Gallus_gallus
ENSUAMG00000011021	YTHDF1	100	73.714	ENSGAFG00000021100	YTHDF1	100	74.245	Gambusia_affinis
ENSUAMG00000011021	YTHDF1	96	71.567	ENSGACG00000012014	ythdf1	92	70.968	Gasterosteus_aculeatus
ENSUAMG00000011021	YTHDF1	100	73.616	ENSGACG00000002613	YTHDF1	97	72.174	Gasterosteus_aculeatus
ENSUAMG00000011021	YTHDF1	100	90.588	ENSGAGG00000003007	YTHDF1	97	88.214	Gopherus_agassizii
ENSUAMG00000011021	YTHDF1	100	93.320	ENSGGOG00000008340	YTHDF1	97	93.542	Gorilla_gorilla
ENSUAMG00000011021	YTHDF1	96	73.031	ENSHBUG00000011284	ythdf1	96	70.693	Haplochromis_burtoni
ENSUAMG00000011021	YTHDF1	100	75.475	ENSHBUG00000004875	YTHDF1	97	75.179	Haplochromis_burtoni
ENSUAMG00000011021	YTHDF1	100	92.534	ENSHGLG00000006585	YTHDF1	97	92.620	Heterocephalus_glaber_female
ENSUAMG00000011021	YTHDF1	100	92.534	ENSHGLG00100004683	YTHDF1	97	92.620	Heterocephalus_glaber_male
ENSUAMG00000011021	YTHDF1	100	74.194	ENSHCOG00000011303	YTHDF1	100	74.170	Hippocampus_comes
ENSUAMG00000011021	YTHDF1	100	76.550	ENSIPUG00000000425	Ythdf1	97	75.949	Ictalurus_punctatus
ENSUAMG00000011021	YTHDF1	100	93.320	ENSSTOG00000023001	YTHDF1	98	93.542	Ictidomys_tridecemlineatus
ENSUAMG00000011021	YTHDF1	100	93.320	ENSJJAG00000013589	Ythdf1	99	93.542	Jaculus_jaculus
ENSUAMG00000011021	YTHDF1	96	71.627	ENSKMAG00000005595	ythdf1	96	71.507	Kryptolebias_marmoratus
ENSUAMG00000011021	YTHDF1	100	74.525	ENSKMAG00000017472	YTHDF1	100	74.600	Kryptolebias_marmoratus
ENSUAMG00000011021	YTHDF1	100	75.940	ENSLBEG00000012068	YTHDF1	98	74.823	Labrus_bergylta
ENSUAMG00000011021	YTHDF1	96	71.739	ENSLBEG00000014105	ythdf1	92	72.978	Labrus_bergylta
ENSUAMG00000011021	YTHDF1	99	81.800	ENSLACG00000014195	YTHDF1	96	82.772	Latimeria_chalumnae
ENSUAMG00000011021	YTHDF1	100	76.648	ENSLOCG00000005020	ythdf1	92	78.799	Lepisosteus_oculatus
ENSUAMG00000011021	YTHDF1	100	92.534	ENSLAFG00000008884	YTHDF1	97	92.989	Loxodonta_africana
ENSUAMG00000011021	YTHDF1	100	93.320	ENSMFAG00000042868	YTHDF1	97	93.542	Macaca_fascicularis
ENSUAMG00000011021	YTHDF1	100	93.320	ENSMMUG00000009227	YTHDF1	97	93.542	Macaca_mulatta
ENSUAMG00000011021	YTHDF1	100	93.320	ENSMNEG00000030851	YTHDF1	97	93.542	Macaca_nemestrina
ENSUAMG00000011021	YTHDF1	100	93.320	ENSMLEG00000009252	YTHDF1	99	93.542	Mandrillus_leucophaeus
ENSUAMG00000011021	YTHDF1	96	70.276	ENSMAMG00000024255	ythdf1	97	72.451	Mastacembelus_armatus
ENSUAMG00000011021	YTHDF1	100	74.573	ENSMAMG00000011072	YTHDF1	98	74.245	Mastacembelus_armatus
ENSUAMG00000011021	YTHDF1	100	75.475	ENSMZEG00005023596	YTHDF1	97	75.179	Maylandia_zebra
ENSUAMG00000011021	YTHDF1	96	73.031	ENSMZEG00005026397	ythdf1	96	71.920	Maylandia_zebra
ENSUAMG00000011021	YTHDF1	100	89.628	ENSMGAG00000006139	YTHDF1	97	88.235	Meleagris_gallopavo
ENSUAMG00000011021	YTHDF1	100	92.534	ENSMAUG00000017660	Ythdf1	97	92.804	Mesocricetus_auratus
ENSUAMG00000011021	YTHDF1	100	92.534	ENSMICG00000032266	YTHDF1	97	92.989	Microcebus_murinus
ENSUAMG00000011021	YTHDF1	100	92.338	ENSMOCG00000013573	Ythdf1	97	92.620	Microtus_ochrogaster
ENSUAMG00000011021	YTHDF1	100	90.020	ENSMODG00000016842	YTHDF1	100	88.063	Monodelphis_domestica
ENSUAMG00000011021	YTHDF1	100	74.858	ENSMALG00000022209	YTHDF1	98	73.712	Monopterus_albus
ENSUAMG00000011021	YTHDF1	96	72.047	ENSMALG00000015672	ythdf1	94	72.131	Monopterus_albus
ENSUAMG00000011021	YTHDF1	100	92.731	MGP_CAROLIEiJ_G0024790	Ythdf1	97	92.804	Mus_caroli
ENSUAMG00000011021	YTHDF1	100	92.731	ENSMUSG00000038848	Ythdf1	97	92.804	Mus_musculus
ENSUAMG00000011021	YTHDF1	100	92.731	MGP_PahariEiJ_G0026237	Ythdf1	97	92.435	Mus_pahari
ENSUAMG00000011021	YTHDF1	100	92.731	MGP_SPRETEiJ_G0025715	Ythdf1	97	92.804	Mus_spretus
ENSUAMG00000011021	YTHDF1	100	90.963	ENSMPUG00000008111	YTHDF1	100	88.212	Mustela_putorius_furo
ENSUAMG00000011021	YTHDF1	100	94.499	ENSMLUG00000002241	YTHDF1	99	92.986	Myotis_lucifugus
ENSUAMG00000011021	YTHDF1	100	93.124	ENSNGAG00000000334	Ythdf1	97	93.358	Nannospalax_galili
ENSUAMG00000011021	YTHDF1	100	75.475	ENSNBRG00000015321	YTHDF1	97	75.179	Neolamprologus_brichardi
ENSUAMG00000011021	YTHDF1	99	70.229	ENSNBRG00000008213	ythdf1	95	71.067	Neolamprologus_brichardi
ENSUAMG00000011021	YTHDF1	98	80.040	ENSOPRG00000001758	-	98	79.350	Ochotona_princeps
ENSUAMG00000011021	YTHDF1	97	72.761	ENSODEG00000000074	-	89	82.697	Octodon_degus
ENSUAMG00000011021	YTHDF1	100	90.802	ENSODEG00000004380	-	97	90.055	Octodon_degus
ENSUAMG00000011021	YTHDF1	100	89.824	ENSOANG00000003723	YTHDF1	97	88.419	Ornithorhynchus_anatinus
ENSUAMG00000011021	YTHDF1	100	83.104	ENSOCUG00000012780	YTHDF1	96	81.734	Oryctolagus_cuniculus
ENSUAMG00000011021	YTHDF1	96	70.881	ENSORLG00000014665	YTHDF1	86	69.508	Oryzias_latipes
ENSUAMG00000011021	YTHDF1	100	74.237	ENSORLG00000009739	YTHDF1	100	73.975	Oryzias_latipes
ENSUAMG00000011021	YTHDF1	96	71.264	ENSORLG00020000307	ythdf1	86	69.886	Oryzias_latipes_hni
ENSUAMG00000011021	YTHDF1	100	75.242	ENSORLG00020001332	YTHDF1	100	74.910	Oryzias_latipes_hni
ENSUAMG00000011021	YTHDF1	96	71.073	ENSORLG00015006302	ythdf1	91	70.515	Oryzias_latipes_hsok
ENSUAMG00000011021	YTHDF1	100	73.855	ENSORLG00015018321	YTHDF1	100	73.619	Oryzias_latipes_hsok
ENSUAMG00000011021	YTHDF1	96	72.871	ENSOMEG00000002941	YTHDF1	96	72.376	Oryzias_melastigma
ENSUAMG00000011021	YTHDF1	100	91.749	ENSOGAG00000000480	YTHDF1	97	91.882	Otolemur_garnettii
ENSUAMG00000011021	YTHDF1	100	85.855	ENSOARG00000011639	YTHDF1	96	87.638	Ovis_aries
ENSUAMG00000011021	YTHDF1	100	93.320	ENSPPAG00000023277	YTHDF1	98	93.542	Pan_paniscus
ENSUAMG00000011021	YTHDF1	100	96.464	ENSPPRG00000020805	YTHDF1	97	96.679	Panthera_pardus
ENSUAMG00000011021	YTHDF1	97	85.240	ENSPTIG00000017355	YTHDF1	87	97.549	Panthera_tigris_altaica
ENSUAMG00000011021	YTHDF1	100	93.320	ENSPTRG00000013730	YTHDF1	97	93.542	Pan_troglodytes
ENSUAMG00000011021	YTHDF1	100	93.320	ENSPANG00000021472	YTHDF1	97	93.542	Papio_anubis
ENSUAMG00000011021	YTHDF1	100	70.115	ENSPKIG00000005427	ythdf1	98	72.122	Paramormyrops_kingsleyae
ENSUAMG00000011021	YTHDF1	98	72.852	ENSPKIG00000005026	YTHDF1	95	72.201	Paramormyrops_kingsleyae
ENSUAMG00000011021	YTHDF1	99	89.087	ENSPSIG00000005529	YTHDF1	94	87.879	Pelodiscus_sinensis
ENSUAMG00000011021	YTHDF1	100	92.534	ENSPEMG00000020199	Ythdf1	99	92.804	Peromyscus_maniculatus_bairdii
ENSUAMG00000011021	YTHDF1	100	89.824	ENSPCIG00000017170	YTHDF1	100	88.063	Phascolarctos_cinereus
ENSUAMG00000011021	YTHDF1	98	73.552	ENSPLAG00000006653	ythdf1	96	72.794	Poecilia_latipinna
ENSUAMG00000011021	YTHDF1	98	72.921	ENSPMEG00000023753	ythdf1	96	72.192	Poecilia_mexicana
ENSUAMG00000011021	YTHDF1	100	73.333	ENSPMEG00000020969	-	97	74.821	Poecilia_mexicana
ENSUAMG00000011021	YTHDF1	98	72.674	ENSPREG00000002173	ythdf1	96	72.694	Poecilia_reticulata
ENSUAMG00000011021	YTHDF1	87	95.522	ENSPPYG00000011226	YTHDF1	98	95.522	Pongo_abelii
ENSUAMG00000011021	YTHDF1	96	87.321	ENSPCAG00000002452	YTHDF1	98	87.375	Procavia_capensis
ENSUAMG00000011021	YTHDF1	100	92.927	ENSPCOG00000025969	YTHDF1	97	93.358	Propithecus_coquereli
ENSUAMG00000011021	YTHDF1	99	84.064	ENSPVAG00000017568	YTHDF1	95	85.551	Pteropus_vampyrus
ENSUAMG00000011021	YTHDF1	96	73.031	ENSPNYG00000014007	ythdf1	96	71.920	Pundamilia_nyererei
ENSUAMG00000011021	YTHDF1	100	75.475	ENSPNYG00000002266	YTHDF1	97	75.179	Pundamilia_nyererei
ENSUAMG00000011021	YTHDF1	100	92.534	ENSRNOG00000027015	Ythdf1	97	92.620	Rattus_norvegicus
ENSUAMG00000011021	YTHDF1	100	92.534	ENSRBIG00000044959	YTHDF1	97	92.804	Rhinopithecus_bieti
ENSUAMG00000011021	YTHDF1	100	92.338	ENSRROG00000033014	YTHDF1	97	92.620	Rhinopithecus_roxellana
ENSUAMG00000011021	YTHDF1	100	90.373	ENSSBOG00000027278	YTHDF1	100	90.373	Saimiri_boliviensis_boliviensis
ENSUAMG00000011021	YTHDF1	100	89.824	ENSSHAG00000010430	YTHDF1	87	89.522	Sarcophilus_harrisii
ENSUAMG00000011021	YTHDF1	100	74.476	ENSSFOG00015000284	ythdf1	95	75.223	Scleropages_formosus
ENSUAMG00000011021	YTHDF1	95	80.162	ENSSMAG00000007635	YTHDF1	91	73.140	Scophthalmus_maximus
ENSUAMG00000011021	YTHDF1	79	83.444	ENSSMAG00000013715	ythdf1	85	78.947	Scophthalmus_maximus
ENSUAMG00000011021	YTHDF1	100	75.522	ENSSDUG00000015823	YTHDF1	97	74.955	Seriola_dumerili
ENSUAMG00000011021	YTHDF1	96	73.622	ENSSDUG00000000435	ythdf1	95	73.503	Seriola_dumerili
ENSUAMG00000011021	YTHDF1	87	87.736	ENSSLDG00000001054	YTHDF1	97	72.352	Seriola_lalandi_dorsalis
ENSUAMG00000011021	YTHDF1	100	88.039	ENSSPUG00000015143	YTHDF1	100	88.039	Sphenodon_punctatus
ENSUAMG00000011021	YTHDF1	100	74.857	ENSSPAG00000003666	YTHDF1	98	72.396	Stegastes_partitus
ENSUAMG00000011021	YTHDF1	100	91.373	ENSSSCG00000040086	YTHDF1	97	87.661	Sus_scrofa
ENSUAMG00000011021	YTHDF1	100	90.020	ENSTGUG00000007565	YTHDF1	98	88.419	Taeniopygia_guttata
ENSUAMG00000011021	YTHDF1	100	72.710	ENSTNIG00000003975	YTHDF1	97	72.072	Tetraodon_nigroviridis
ENSUAMG00000011021	YTHDF1	99	71.930	ENSTNIG00000012490	ythdf1	96	73.042	Tetraodon_nigroviridis
ENSUAMG00000011021	YTHDF1	99	92.032	ENSTTRG00000001804	YTHDF1	95	92.571	Tursiops_truncatus
ENSUAMG00000011021	YTHDF1	100	99.607	ENSUMAG00000022290	YTHDF1	100	99.607	Ursus_maritimus
ENSUAMG00000011021	YTHDF1	99	97.441	ENSVVUG00000015275	YTHDF1	99	97.441	Vulpes_vulpes
ENSUAMG00000011021	YTHDF1	98	82.711	ENSXETG00000027086	ythdf1	97	80.944	Xenopus_tropicalis
ENSUAMG00000011021	YTHDF1	98	72.287	ENSXCOG00000002490	ythdf1	94	71.585	Xiphophorus_couchianus
ENSUAMG00000011021	YTHDF1	100	75.191	ENSXMAG00000015644	YTHDF1	100	75.445	Xiphophorus_maculatus
ENSUAMG00000011021	YTHDF1	98	72.374	ENSXMAG00000008525	ythdf1	95	72.477	Xiphophorus_maculatus