EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000011354 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 6584 bases
Position: chrLZNR01002418.1:395741-402324
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000014132	PseudoU_synth_2	PF00849.22	8.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000015859	RPUSD3-201	1621	-	ENSUAMP00000014132	321 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000011354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000011354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000011354	RPUSD3	98	81.847	ENSG00000156990	RPUSD3	96	81.951	Homo_sapiens
ENSUAMG00000011354	RPUSD3	98	96.815	ENSAMEG00000016227	RPUSD3	89	96.815	Ailuropoda_melanoleuca
ENSUAMG00000011354	RPUSD3	87	53.214	ENSACAG00000009836	RPUSD3	79	53.214	Anolis_carolinensis
ENSUAMG00000011354	RPUSD3	59	80.423	ENSANAG00000038118	-	90	80.423	Aotus_nancymaae
ENSUAMG00000011354	RPUSD3	74	60.159	ENSANAG00000007127	-	97	59.135	Aotus_nancymaae
ENSUAMG00000011354	RPUSD3	62	81.500	ENSANAG00000019945	-	80	81.500	Aotus_nancymaae
ENSUAMG00000011354	RPUSD3	98	81.529	ENSBTAG00000007968	RPUSD3	91	81.529	Bos_taurus
ENSUAMG00000011354	RPUSD3	98	92.357	ENSCAFG00000029733	RPUSD3	89	92.357	Canis_familiaris
ENSUAMG00000011354	RPUSD3	98	92.381	ENSCAFG00020008582	RPUSD3	96	92.381	Canis_lupus_dingo
ENSUAMG00000011354	RPUSD3	98	79.618	ENSCHIG00000026027	RPUSD3	91	79.618	Capra_hircus
ENSUAMG00000011354	RPUSD3	98	76.972	ENSTSYG00000009994	RPUSD3	90	76.972	Carlito_syrichta
ENSUAMG00000011354	RPUSD3	82	79.087	ENSCAPG00000017559	RPUSD3	99	79.087	Cavia_aperea
ENSUAMG00000011354	RPUSD3	82	78.788	ENSCPOG00000037956	RPUSD3	86	72.787	Cavia_porcellus
ENSUAMG00000011354	RPUSD3	98	80.892	ENSCCAG00000029530	RPUSD3	97	80.676	Cebus_capucinus
ENSUAMG00000011354	RPUSD3	97	81.731	ENSCATG00000036939	RPUSD3	96	80.000	Cercocebus_atys
ENSUAMG00000011354	RPUSD3	97	82.051	ENSCSAG00000010506	RPUSD3	89	82.051	Chlorocebus_sabaeus
ENSUAMG00000011354	RPUSD3	55	83.036	ENSCHOG00000010151	-	67	83.036	Choloepus_hoffmanni
ENSUAMG00000011354	RPUSD3	78	54.000	ENSCPBG00000008825	RPUSD3	93	53.200	Chrysemys_picta_bellii
ENSUAMG00000011354	RPUSD3	97	82.051	ENSCANG00000040711	RPUSD3	96	80.488	Colobus_angolensis_palliatus
ENSUAMG00000011354	RPUSD3	97	74.920	ENSCGRG00001004923	Rpusd3	83	76.490	Cricetulus_griseus_chok1gshd
ENSUAMG00000011354	RPUSD3	97	74.920	ENSCGRG00000018315	Rpusd3	88	76.490	Cricetulus_griseus_crigri
ENSUAMG00000011354	RPUSD3	98	77.636	ENSDNOG00000039160	RPUSD3	83	77.636	Dasypus_novemcinctus
ENSUAMG00000011354	RPUSD3	81	75.373	ENSDORG00000026827	Rpusd3	92	75.373	Dipodomys_ordii
ENSUAMG00000011354	RPUSD3	98	75.478	ENSETEG00000006538	RPUSD3	89	75.478	Echinops_telfairi
ENSUAMG00000011354	RPUSD3	74	35.366	ENSEBUG00000015605	RPUSD3	79	35.366	Eptatretus_burgeri
ENSUAMG00000011354	RPUSD3	98	85.350	ENSEASG00005014160	RPUSD3	87	85.350	Equus_asinus_asinus
ENSUAMG00000011354	RPUSD3	98	85.032	ENSECAG00000019988	RPUSD3	87	85.032	Equus_caballus
ENSUAMG00000011354	RPUSD3	94	62.376	ENSEEUG00000007353	RPUSD3	85	62.376	Erinaceus_europaeus
ENSUAMG00000011354	RPUSD3	98	92.038	ENSFCAG00000014199	RPUSD3	89	92.038	Felis_catus
ENSUAMG00000011354	RPUSD3	84	47.794	ENSFALG00000012968	RPUSD3	99	48.718	Ficedula_albicollis
ENSUAMG00000011354	RPUSD3	82	79.167	ENSFDAG00000008350	RPUSD3	81	79.167	Fukomys_damarensis
ENSUAMG00000011354	RPUSD3	82	55.133	ENSGAGG00000007493	RPUSD3	82	54.373	Gopherus_agassizii
ENSUAMG00000011354	RPUSD3	98	82.166	ENSGGOG00000013120	RPUSD3	96	82.439	Gorilla_gorilla
ENSUAMG00000011354	RPUSD3	92	76.271	ENSHGLG00000011722	RPUSD3	74	76.271	Heterocephalus_glaber_female
ENSUAMG00000011354	RPUSD3	92	76.271	ENSHGLG00100016038	RPUSD3	74	76.271	Heterocephalus_glaber_male
ENSUAMG00000011354	RPUSD3	98	80.255	ENSSTOG00000002125	RPUSD3	89	80.255	Ictidomys_tridecemlineatus
ENSUAMG00000011354	RPUSD3	95	75.410	ENSJJAG00000012679	Rpusd3	89	75.410	Jaculus_jaculus
ENSUAMG00000011354	RPUSD3	98	79.936	ENSLAFG00000017501	RPUSD3	91	79.936	Loxodonta_africana
ENSUAMG00000011354	RPUSD3	97	81.410	ENSMFAG00000032407	RPUSD3	89	81.410	Macaca_fascicularis
ENSUAMG00000011354	RPUSD3	98	81.905	ENSMMUG00000010628	RPUSD3	98	81.905	Macaca_mulatta
ENSUAMG00000011354	RPUSD3	97	81.410	ENSMNEG00000040308	RPUSD3	89	81.410	Macaca_nemestrina
ENSUAMG00000011354	RPUSD3	97	82.051	ENSMLEG00000033940	RPUSD3	96	80.488	Mandrillus_leucophaeus
ENSUAMG00000011354	RPUSD3	95	77.705	ENSMAUG00000015473	Rpusd3	89	77.705	Mesocricetus_auratus
ENSUAMG00000011354	RPUSD3	98	81.210	ENSMICG00000002315	RPUSD3	94	80.788	Microcebus_murinus
ENSUAMG00000011354	RPUSD3	98	73.248	ENSMOCG00000022613	Rpusd3	91	73.248	Microtus_ochrogaster
ENSUAMG00000011354	RPUSD3	97	59.032	ENSMODG00000005210	RPUSD3	81	57.605	Monodelphis_domestica
ENSUAMG00000011354	RPUSD3	94	76.238	MGP_CAROLIEiJ_G0028725	Rpusd3	89	77.406	Mus_caroli
ENSUAMG00000011354	RPUSD3	94	76.898	ENSMUSG00000051169	Rpusd3	86	80.000	Mus_musculus
ENSUAMG00000011354	RPUSD3	94	76.898	MGP_PahariEiJ_G0022476	Rpusd3	89	78.243	Mus_pahari
ENSUAMG00000011354	RPUSD3	94	76.238	MGP_SPRETEiJ_G0029753	Rpusd3	89	76.569	Mus_spretus
ENSUAMG00000011354	RPUSD3	98	92.357	ENSMPUG00000017132	RPUSD3	89	92.357	Mustela_putorius_furo
ENSUAMG00000011354	RPUSD3	98	84.076	ENSMLUG00000006135	RPUSD3	90	84.076	Myotis_lucifugus
ENSUAMG00000011354	RPUSD3	97	73.633	ENSNGAG00000023704	Rpusd3	90	75.497	Nannospalax_galili
ENSUAMG00000011354	RPUSD3	98	66.561	ENSNLEG00000004214	RPUSD3	96	81.951	Nomascus_leucogenys
ENSUAMG00000011354	RPUSD3	81	64.368	ENSMEUG00000013098	-	100	64.368	Notamacropus_eugenii
ENSUAMG00000011354	RPUSD3	97	62.821	ENSOPRG00000002300	RPUSD3	89	62.821	Ochotona_princeps
ENSUAMG00000011354	RPUSD3	82	79.167	ENSODEG00000018137	RPUSD3	91	79.167	Octodon_degus
ENSUAMG00000011354	RPUSD3	88	49.301	ENSOANG00000012081	-	99	48.592	Ornithorhynchus_anatinus
ENSUAMG00000011354	RPUSD3	93	70.358	ENSOCUG00000027885	RPUSD3	89	70.358	Oryctolagus_cuniculus
ENSUAMG00000011354	RPUSD3	98	81.210	ENSOGAG00000012592	RPUSD3	100	81.210	Otolemur_garnettii
ENSUAMG00000011354	RPUSD3	98	81.847	ENSOARG00000005928	RPUSD3	89	81.847	Ovis_aries
ENSUAMG00000011354	RPUSD3	97	82.637	ENSPPAG00000038083	RPUSD3	96	82.927	Pan_paniscus
ENSUAMG00000011354	RPUSD3	98	91.720	ENSPPRG00000024433	RPUSD3	89	91.720	Panthera_pardus
ENSUAMG00000011354	RPUSD3	98	92.675	ENSPTIG00000006828	RPUSD3	91	92.675	Panthera_tigris_altaica
ENSUAMG00000011354	RPUSD3	97	82.315	ENSPTRG00000051760	RPUSD3	96	82.439	Pan_troglodytes
ENSUAMG00000011354	RPUSD3	97	82.372	ENSPANG00000023885	RPUSD3	96	80.488	Papio_anubis
ENSUAMG00000011354	RPUSD3	98	74.522	ENSPEMG00000017245	Rpusd3	91	74.522	Peromyscus_maniculatus_bairdii
ENSUAMG00000011354	RPUSD3	97	60.645	ENSPCIG00000021901	RPUSD3	89	59.223	Phascolarctos_cinereus
ENSUAMG00000011354	RPUSD3	97	81.994	ENSPPYG00000013676	RPUSD3	88	81.994	Pongo_abelii
ENSUAMG00000011354	RPUSD3	78	64.940	ENSPCAG00000013731	-	87	64.940	Procavia_capensis
ENSUAMG00000011354	RPUSD3	98	83.758	ENSPCOG00000018314	RPUSD3	89	83.758	Propithecus_coquereli
ENSUAMG00000011354	RPUSD3	98	82.803	ENSPVAG00000011107	RPUSD3	89	82.803	Pteropus_vampyrus
ENSUAMG00000011354	RPUSD3	94	71.947	ENSRNOG00000009084	Rpusd3	90	71.947	Rattus_norvegicus
ENSUAMG00000011354	RPUSD3	97	82.903	ENSRBIG00000041230	RPUSD3	96	81.463	Rhinopithecus_bieti
ENSUAMG00000011354	RPUSD3	97	82.903	ENSRROG00000043328	RPUSD3	96	81.463	Rhinopithecus_roxellana
ENSUAMG00000011354	RPUSD3	98	80.255	ENSSBOG00000036106	RPUSD3	90	80.255	Saimiri_boliviensis_boliviensis
ENSUAMG00000011354	RPUSD3	96	59.416	ENSSHAG00000015536	RPUSD3	99	57.792	Sarcophilus_harrisii
ENSUAMG00000011354	RPUSD3	98	82.166	ENSSSCG00000011555	RPUSD3	89	82.166	Sus_scrofa
ENSUAMG00000011354	RPUSD3	68	49.309	ENSTGUG00000008744	RPUSD3	93	49.309	Taeniopygia_guttata
ENSUAMG00000011354	RPUSD3	78	79.681	ENSTBEG00000000176	RPUSD3	87	79.681	Tupaia_belangeri
ENSUAMG00000011354	RPUSD3	98	83.439	ENSTTRG00000007544	RPUSD3	89	83.439	Tursiops_truncatus
ENSUAMG00000011354	RPUSD3	98	99.363	ENSUMAG00000018830	RPUSD3	89	99.363	Ursus_maritimus
ENSUAMG00000011354	RPUSD3	98	92.357	ENSVVUG00000023735	RPUSD3	91	92.357	Vulpes_vulpes
ENSUAMG00000011354	RPUSD3	87	48.936	ENSXETG00000023546	rpusd3	99	48.936	Xenopus_tropicalis