EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000011413 (Gene tree)
Gene ID: -
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 41512 bases
Position: chrLZNR01019466.1:35692-77203
Accession: 20422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000014200	RNA_pol_L_2	PF13656.6	5e-28	1	1
ENSUAMP00000014200	RNA_pol_L	PF01193.24	8.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000015933	POLR1D-201	1411	-	ENSUAMP00000014199	122 (aa)	-	-
ENSUAMT00000015934	POLR1D-202	1339	-	ENSUAMP00000014200	133 (aa)	-	UPI00004BE302

Gene Model

Click here to download ENSUAMG00000011413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000011413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000011413	POLR1D	77	32.039	ENSUAMG00000011310	-	85	32.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000011413	POLR1D	100	98.496	ENSG00000186184	POLR1D	100	98.496	Homo_sapiens
ENSUAMG00000011413	POLR1D	83	67.568	ENSAPOG00000021882	polr1d	98	67.568	Acanthochromis_polyacanthus
ENSUAMG00000011413	POLR1D	94	100.000	ENSAMEG00000019095	POLR1D	100	100.000	Ailuropoda_melanoleuca
ENSUAMG00000011413	POLR1D	80	71.296	ENSACIG00000013328	polr1d	94	71.296	Amphilophus_citrinellus
ENSUAMG00000011413	POLR1D	84	66.964	ENSAOCG00000018500	polr1d	98	66.964	Amphiprion_ocellaris
ENSUAMG00000011413	POLR1D	84	66.071	ENSAPEG00000009489	polr1d	98	66.071	Amphiprion_percula
ENSUAMG00000011413	POLR1D	80	68.224	ENSATEG00000019322	polr1d	94	68.224	Anabas_testudineus
ENSUAMG00000011413	POLR1D	83	66.667	ENSACAG00000015753	POLR1D	96	66.667	Anolis_carolinensis
ENSUAMG00000011413	POLR1D	100	99.248	ENSANAG00000024486	POLR1D	100	99.248	Aotus_nancymaae
ENSUAMG00000011413	POLR1D	80	71.963	ENSACLG00000023805	polr1d	94	71.963	Astatotilapia_calliptera
ENSUAMG00000011413	POLR1D	80	69.811	ENSAMXG00000036118	polr1d	92	69.811	Astyanax_mexicanus
ENSUAMG00000011413	POLR1D	100	96.241	ENSBTAG00000008642	POLR1D	100	96.241	Bos_taurus
ENSUAMG00000011413	POLR1D	100	96.241	ENSBTAG00000033252	-	100	96.241	Bos_taurus
ENSUAMG00000011413	POLR1D	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSUAMG00000011413	POLR1D	100	98.496	ENSCJAG00000044669	POLR1D	100	98.496	Callithrix_jacchus
ENSUAMG00000011413	POLR1D	100	100.000	ENSCAFG00000006755	POLR1D	100	100.000	Canis_familiaris
ENSUAMG00000011413	POLR1D	100	96.992	ENSCHIG00000021910	POLR1D	100	96.992	Capra_hircus
ENSUAMG00000011413	POLR1D	96	83.077	ENSTSYG00000034852	-	98	83.193	Carlito_syrichta
ENSUAMG00000011413	POLR1D	93	94.355	ENSTSYG00000026817	-	93	94.355	Carlito_syrichta
ENSUAMG00000011413	POLR1D	96	54.688	ENSCAPG00000006058	-	99	54.688	Cavia_aperea
ENSUAMG00000011413	POLR1D	96	55.469	ENSCPOG00000030450	-	99	55.469	Cavia_porcellus
ENSUAMG00000011413	POLR1D	100	97.744	ENSCCAG00000021349	-	100	97.744	Cebus_capucinus
ENSUAMG00000011413	POLR1D	100	79.699	ENSCCAG00000020191	-	100	79.699	Cebus_capucinus
ENSUAMG00000011413	POLR1D	100	86.466	ENSCATG00000022900	-	100	86.466	Cercocebus_atys
ENSUAMG00000011413	POLR1D	100	96.992	ENSCATG00000030710	-	100	96.992	Cercocebus_atys
ENSUAMG00000011413	POLR1D	93	96.774	ENSCLAG00000017623	POLR1D	100	96.774	Chinchilla_lanigera
ENSUAMG00000011413	POLR1D	73	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSUAMG00000011413	POLR1D	100	96.992	ENSCANG00000028632	-	100	96.992	Colobus_angolensis_palliatus
ENSUAMG00000011413	POLR1D	100	93.985	ENSCANG00000037694	-	100	93.985	Colobus_angolensis_palliatus
ENSUAMG00000011413	POLR1D	100	95.489	ENSCGRG00001021251	Polr1d	100	95.489	Cricetulus_griseus_chok1gshd
ENSUAMG00000011413	POLR1D	100	95.489	ENSCGRG00000011639	Polr1d	100	95.489	Cricetulus_griseus_crigri
ENSUAMG00000011413	POLR1D	78	71.154	ENSCSEG00000018268	polr1d	91	70.093	Cynoglossus_semilaevis
ENSUAMG00000011413	POLR1D	79	72.381	ENSCVAG00000018527	polr1d	92	72.381	Cyprinodon_variegatus
ENSUAMG00000011413	POLR1D	83	67.273	ENSDARG00000037570	polr1d	98	67.273	Danio_rerio
ENSUAMG00000011413	POLR1D	100	93.284	ENSDNOG00000046247	-	100	93.284	Dasypus_novemcinctus
ENSUAMG00000011413	POLR1D	100	95.489	ENSDNOG00000043676	-	100	95.489	Dasypus_novemcinctus
ENSUAMG00000011413	POLR1D	100	95.489	ENSDORG00000029155	Polr1d	100	95.489	Dipodomys_ordii
ENSUAMG00000011413	POLR1D	65	44.186	FBgn0086447	l(2)37Cg	81	44.186	Drosophila_melanogaster
ENSUAMG00000011413	POLR1D	93	89.516	ENSETEG00000012797	POLR1D	100	89.516	Echinops_telfairi
ENSUAMG00000011413	POLR1D	65	71.264	ENSEBUG00000011748	polr1d	61	71.264	Eptatretus_burgeri
ENSUAMG00000011413	POLR1D	96	97.656	ENSEASG00005022487	POLR1D	99	97.656	Equus_asinus_asinus
ENSUAMG00000011413	POLR1D	93	98.387	ENSEEUG00000013144	POLR1D	100	98.387	Erinaceus_europaeus
ENSUAMG00000011413	POLR1D	80	69.811	ENSELUG00000005105	rpac2	93	69.811	Esox_lucius
ENSUAMG00000011413	POLR1D	100	98.496	ENSFCAG00000030162	POLR1D	100	98.496	Felis_catus
ENSUAMG00000011413	POLR1D	72	78.125	ENSFALG00000011463	POLR1D	95	78.125	Ficedula_albicollis
ENSUAMG00000011413	POLR1D	100	95.489	ENSFDAG00000004463	POLR1D	100	95.489	Fukomys_damarensis
ENSUAMG00000011413	POLR1D	82	73.636	ENSFHEG00000015410	polr1d	96	73.636	Fundulus_heteroclitus
ENSUAMG00000011413	POLR1D	83	69.643	ENSGAFG00000001693	polr1d	92	73.333	Gambusia_affinis
ENSUAMG00000011413	POLR1D	88	69.492	ENSGACG00000018585	polr1d	100	69.492	Gasterosteus_aculeatus
ENSUAMG00000011413	POLR1D	80	79.245	ENSGAGG00000008503	POLR1D	93	79.245	Gopherus_agassizii
ENSUAMG00000011413	POLR1D	100	98.496	ENSGGOG00000004235	POLR1D	100	98.496	Gorilla_gorilla
ENSUAMG00000011413	POLR1D	80	71.963	ENSHBUG00000002111	polr1d	94	71.963	Haplochromis_burtoni
ENSUAMG00000011413	POLR1D	100	95.489	ENSHGLG00000003202	POLR1D	100	95.489	Heterocephalus_glaber_female
ENSUAMG00000011413	POLR1D	100	95.489	ENSHGLG00100009393	POLR1D	100	95.489	Heterocephalus_glaber_male
ENSUAMG00000011413	POLR1D	80	70.093	ENSHCOG00000003258	polr1d	94	70.093	Hippocampus_comes
ENSUAMG00000011413	POLR1D	79	72.381	ENSIPUG00000014810	polr1d	91	72.381	Ictalurus_punctatus
ENSUAMG00000011413	POLR1D	100	99.248	ENSSTOG00000013877	POLR1D	100	99.248	Ictidomys_tridecemlineatus
ENSUAMG00000011413	POLR1D	95	75.397	ENSJJAG00000021667	-	75	75.397	Jaculus_jaculus
ENSUAMG00000011413	POLR1D	97	90.226	ENSJJAG00000022671	-	100	93.333	Jaculus_jaculus
ENSUAMG00000011413	POLR1D	80	67.925	ENSKMAG00000015256	polr1d	93	67.925	Kryptolebias_marmoratus
ENSUAMG00000011413	POLR1D	79	73.333	ENSLBEG00000015919	polr1d	92	73.333	Labrus_bergylta
ENSUAMG00000011413	POLR1D	86	66.087	ENSLACG00000006810	POLR1D	95	66.087	Latimeria_chalumnae
ENSUAMG00000011413	POLR1D	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSUAMG00000011413	POLR1D	100	88.722	ENSLAFG00000032290	POLR1D	100	88.722	Loxodonta_africana
ENSUAMG00000011413	POLR1D	94	96.800	ENSMFAG00000045264	POLR1D	97	96.800	Macaca_fascicularis
ENSUAMG00000011413	POLR1D	100	78.195	ENSMMUG00000041570	-	100	78.195	Macaca_mulatta
ENSUAMG00000011413	POLR1D	87	97.414	ENSMMUG00000020386	POLR1D	100	97.414	Macaca_mulatta
ENSUAMG00000011413	POLR1D	100	97.744	ENSMNEG00000008630	-	100	97.744	Macaca_nemestrina
ENSUAMG00000011413	POLR1D	100	81.203	ENSMNEG00000038120	-	100	81.203	Macaca_nemestrina
ENSUAMG00000011413	POLR1D	100	97.744	ENSMLEG00000041048	-	100	97.744	Mandrillus_leucophaeus
ENSUAMG00000011413	POLR1D	100	87.218	ENSMLEG00000032251	-	100	87.218	Mandrillus_leucophaeus
ENSUAMG00000011413	POLR1D	76	71.287	ENSMAMG00000014834	polr1d	94	71.287	Mastacembelus_armatus
ENSUAMG00000011413	POLR1D	75	75.000	ENSMZEG00005006638	polr1d	88	75.000	Maylandia_zebra
ENSUAMG00000011413	POLR1D	80	69.725	ENSMGAG00000005322	POLR1D	100	69.725	Meleagris_gallopavo
ENSUAMG00000011413	POLR1D	100	95.489	ENSMAUG00000001946	Polr1d	100	95.489	Mesocricetus_auratus
ENSUAMG00000011413	POLR1D	99	80.303	ENSMICG00000007349	-	100	80.303	Microcebus_murinus
ENSUAMG00000011413	POLR1D	100	96.992	ENSMICG00000016883	-	100	96.992	Microcebus_murinus
ENSUAMG00000011413	POLR1D	99	94.697	ENSMOCG00000021288	Polr1d	99	94.697	Microtus_ochrogaster
ENSUAMG00000011413	POLR1D	80	69.159	ENSMMOG00000009605	polr1d	94	69.159	Mola_mola
ENSUAMG00000011413	POLR1D	80	84.906	ENSMODG00000023881	POLR1D	93	84.906	Monodelphis_domestica
ENSUAMG00000011413	POLR1D	80	68.224	ENSMALG00000010652	polr1d	94	68.224	Monopterus_albus
ENSUAMG00000011413	POLR1D	100	90.226	MGP_CAROLIEiJ_G0028034	Polr1d	100	90.226	Mus_caroli
ENSUAMG00000011413	POLR1D	100	90.226	ENSMUSG00000029642	Polr1d	100	90.226	Mus_musculus
ENSUAMG00000011413	POLR1D	100	89.474	MGP_PahariEiJ_G0024600	Polr1d	100	89.474	Mus_pahari
ENSUAMG00000011413	POLR1D	100	90.977	MGP_SPRETEiJ_G0029032	Polr1d	100	90.977	Mus_spretus
ENSUAMG00000011413	POLR1D	99	87.879	ENSMLUG00000004118	-	99	87.879	Myotis_lucifugus
ENSUAMG00000011413	POLR1D	100	97.744	ENSMLUG00000027169	-	100	97.744	Myotis_lucifugus
ENSUAMG00000011413	POLR1D	87	97.414	ENSNGAG00000006014	Polr1d	100	97.414	Nannospalax_galili
ENSUAMG00000011413	POLR1D	80	71.963	ENSNBRG00000020327	polr1d	94	71.963	Neolamprologus_brichardi
ENSUAMG00000011413	POLR1D	100	98.496	ENSNLEG00000000358	POLR1D	100	98.496	Nomascus_leucogenys
ENSUAMG00000011413	POLR1D	100	81.203	ENSODEG00000014801	-	100	81.203	Octodon_degus
ENSUAMG00000011413	POLR1D	100	95.489	ENSODEG00000005294	-	100	95.489	Octodon_degus
ENSUAMG00000011413	POLR1D	79	82.857	ENSOANG00000008708	-	97	82.857	Ornithorhynchus_anatinus
ENSUAMG00000011413	POLR1D	100	96.992	ENSOCUG00000015706	POLR1D	82	96.992	Oryctolagus_cuniculus
ENSUAMG00000011413	POLR1D	80	69.811	ENSORLG00000010257	polr1d	93	69.811	Oryzias_latipes
ENSUAMG00000011413	POLR1D	83	67.568	ENSORLG00020000533	polr1d	75	67.568	Oryzias_latipes_hni
ENSUAMG00000011413	POLR1D	85	68.142	ENSORLG00015013267	polr1d	75	68.142	Oryzias_latipes_hsok
ENSUAMG00000011413	POLR1D	86	67.826	ENSOMEG00000014912	polr1d	77	67.826	Oryzias_melastigma
ENSUAMG00000011413	POLR1D	100	96.992	ENSOGAG00000014601	POLR1D	100	96.992	Otolemur_garnettii
ENSUAMG00000011413	POLR1D	94	96.800	ENSOARG00000017005	POLR1D	96	96.800	Ovis_aries
ENSUAMG00000011413	POLR1D	100	96.992	ENSPPAG00000028138	POLR1D	100	96.992	Pan_paniscus
ENSUAMG00000011413	POLR1D	99	98.485	ENSPPRG00000003381	POLR1D	99	98.485	Panthera_pardus
ENSUAMG00000011413	POLR1D	93	98.387	ENSPTIG00000018137	POLR1D	93	98.387	Panthera_tigris_altaica
ENSUAMG00000011413	POLR1D	100	98.496	ENSPTRG00000005734	POLR1D	100	98.496	Pan_troglodytes
ENSUAMG00000011413	POLR1D	100	86.466	ENSPANG00000035051	-	100	86.466	Papio_anubis
ENSUAMG00000011413	POLR1D	100	97.744	ENSPANG00000020259	-	100	97.744	Papio_anubis
ENSUAMG00000011413	POLR1D	86	61.739	ENSPKIG00000021891	polr1d	90	52.212	Paramormyrops_kingsleyae
ENSUAMG00000011413	POLR1D	87	73.504	ENSPSIG00000011822	POLR1D	91	73.504	Pelodiscus_sinensis
ENSUAMG00000011413	POLR1D	84	66.964	ENSPMGG00000010359	polr1d	97	66.964	Periophthalmus_magnuspinnatus
ENSUAMG00000011413	POLR1D	93	57.600	ENSPMGG00000012998	POLR1D	93	57.600	Periophthalmus_magnuspinnatus
ENSUAMG00000011413	POLR1D	100	91.729	ENSPEMG00000006336	-	100	91.729	Peromyscus_maniculatus_bairdii
ENSUAMG00000011413	POLR1D	82	59.633	ENSPMAG00000004228	polr1d	92	59.633	Petromyzon_marinus
ENSUAMG00000011413	POLR1D	80	84.906	ENSPCIG00000001673	POLR1D	93	84.906	Phascolarctos_cinereus
ENSUAMG00000011413	POLR1D	79	73.333	ENSPFOG00000023343	polr1d	92	75.000	Poecilia_formosa
ENSUAMG00000011413	POLR1D	79	73.333	ENSPLAG00000009675	polr1d	92	73.333	Poecilia_latipinna
ENSUAMG00000011413	POLR1D	79	73.333	ENSPMEG00000004628	polr1d	92	73.333	Poecilia_mexicana
ENSUAMG00000011413	POLR1D	79	73.333	ENSPREG00000022032	polr1d	92	73.333	Poecilia_reticulata
ENSUAMG00000011413	POLR1D	100	96.992	ENSPCOG00000028175	POLR1D	100	96.992	Propithecus_coquereli
ENSUAMG00000011413	POLR1D	80	71.963	ENSPNYG00000000107	polr1d	94	71.963	Pundamilia_nyererei
ENSUAMG00000011413	POLR1D	76	69.307	ENSPNAG00000001512	polr1d	87	68.269	Pygocentrus_nattereri
ENSUAMG00000011413	POLR1D	100	93.985	ENSRBIG00000000336	-	100	93.985	Rhinopithecus_bieti
ENSUAMG00000011413	POLR1D	100	97.744	ENSRBIG00000036378	-	100	97.744	Rhinopithecus_bieti
ENSUAMG00000011413	POLR1D	100	93.985	ENSRROG00000026751	-	100	93.985	Rhinopithecus_roxellana
ENSUAMG00000011413	POLR1D	100	97.744	ENSRROG00000042232	-	100	97.744	Rhinopithecus_roxellana
ENSUAMG00000011413	POLR1D	89	45.378	YNL113W	RPC19	84	45.378	Saccharomyces_cerevisiae
ENSUAMG00000011413	POLR1D	100	99.248	ENSSBOG00000028482	-	100	99.248	Saimiri_boliviensis_boliviensis
ENSUAMG00000011413	POLR1D	86	92.982	ENSSBOG00000030146	-	84	92.982	Saimiri_boliviensis_boliviensis
ENSUAMG00000011413	POLR1D	86	78.070	ENSSHAG00000001190	POLR1D	88	78.070	Sarcophilus_harrisii
ENSUAMG00000011413	POLR1D	83	72.973	ENSSFOG00015011375	polr1d	97	72.973	Scleropages_formosus
ENSUAMG00000011413	POLR1D	80	69.159	ENSSMAG00000011861	polr1d	94	69.159	Scophthalmus_maximus
ENSUAMG00000011413	POLR1D	80	68.224	ENSSDUG00000011930	polr1d	94	68.224	Seriola_dumerili
ENSUAMG00000011413	POLR1D	86	63.478	ENSSLDG00000023871	polr1d	97	63.478	Seriola_lalandi_dorsalis
ENSUAMG00000011413	POLR1D	100	98.496	ENSSARG00000007840	POLR1D	100	98.496	Sorex_araneus
ENSUAMG00000011413	POLR1D	79	76.190	ENSSPUG00000005786	POLR1D	95	72.973	Sphenodon_punctatus
ENSUAMG00000011413	POLR1D	79	72.381	ENSSPAG00000011764	polr1d	92	72.381	Stegastes_partitus
ENSUAMG00000011413	POLR1D	100	95.489	ENSSSCG00000009310	POLR1D	100	95.489	Sus_scrofa
ENSUAMG00000011413	POLR1D	72	78.125	ENSTGUG00000005450	POLR1D	100	78.125	Taeniopygia_guttata
ENSUAMG00000011413	POLR1D	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSUAMG00000011413	POLR1D	93	96.774	ENSTBEG00000007006	POLR1D	100	96.774	Tupaia_belangeri
ENSUAMG00000011413	POLR1D	93	100.000	ENSUMAG00000016968	POLR1D	97	100.000	Ursus_maritimus
ENSUAMG00000011413	POLR1D	100	100.000	ENSVVUG00000009216	POLR1D	100	100.000	Vulpes_vulpes
ENSUAMG00000011413	POLR1D	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSUAMG00000011413	POLR1D	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus