EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000011687 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 702 bases
Position: chrLZNR01019557.1:63386-64087
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000014570	RRM_5	PF13893.6	1.8e-15	1	2
ENSUAMP00000014570	RRM_5	PF13893.6	1.8e-15	2	2
ENSUAMP00000014570	RRM_1	PF00076.22	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000016345	-	423	-	ENSUAMP00000014570	140 (aa)	-	UPI00006DE7BE

Gene Model

Click here to download ENSUAMG00000011687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000011687's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000011687	-	74	31.731	ENSUAMG00000008220	NONO	57	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000011687	-	100	81.560	ENSG00000011304	PTBP1	88	85.915	Homo_sapiens
ENSUAMG00000011687	-	99	31.373	ENSG00000143889	HNRNPLL	95	31.496	Homo_sapiens
ENSUAMG00000011687	-	100	80.714	ENSACLG00000001885	ptbp2b	77	80.714	Astatotilapia_calliptera
ENSUAMG00000011687	-	100	80.851	ENSCJAG00000020162	-	68	80.851	Callithrix_jacchus
ENSUAMG00000011687	-	99	32.026	ENSCAPG00000013604	HNRNPLL	50	32.026	Cavia_aperea
ENSUAMG00000011687	-	100	80.851	ENSCCAG00000025811	-	72	80.851	Cebus_capucinus
ENSUAMG00000011687	-	100	81.560	ENSCATG00000033337	-	72	81.560	Cercocebus_atys
ENSUAMG00000011687	-	100	56.028	ENSCING00000002002	-	70	56.028	Ciona_intestinalis
ENSUAMG00000011687	-	100	69.504	ENSCANG00000040666	-	69	69.504	Colobus_angolensis_palliatus
ENSUAMG00000011687	-	100	81.560	ENSCANG00000038259	PTBP1	73	81.560	Colobus_angolensis_palliatus
ENSUAMG00000011687	-	100	78.014	ENSCANG00000005173	-	72	78.014	Colobus_angolensis_palliatus
ENSUAMG00000011687	-	100	74.468	ENSCGRG00000006229	-	72	74.468	Cricetulus_griseus_crigri
ENSUAMG00000011687	-	100	65.714	ENSCVAG00000021593	-	76	65.714	Cyprinodon_variegatus
ENSUAMG00000011687	-	100	86.429	ENSDARG00000101947	ptbp2a	77	86.429	Danio_rerio
ENSUAMG00000011687	-	100	74.468	ENSDARG00000031907	ptbp1b	63	74.468	Danio_rerio
ENSUAMG00000011687	-	100	79.433	ENSEASG00005021535	-	93	79.433	Equus_asinus_asinus
ENSUAMG00000011687	-	100	80.851	ENSFCAG00000001219	PTBP1	72	80.851	Felis_catus
ENSUAMG00000011687	-	91	69.767	ENSGGOG00000026783	-	70	66.393	Gorilla_gorilla
ENSUAMG00000011687	-	100	81.560	ENSGGOG00000005090	-	75	81.560	Gorilla_gorilla
ENSUAMG00000011687	-	100	75.177	ENSHBUG00000000040	-	93	75.177	Haplochromis_burtoni
ENSUAMG00000011687	-	100	81.560	ENSHGLG00100004890	-	100	81.560	Heterocephalus_glaber_male
ENSUAMG00000011687	-	100	79.286	ENSHCOG00000015622	-	65	79.286	Hippocampus_comes
ENSUAMG00000011687	-	100	85.000	ENSHCOG00000013349	ptbp2a	59	85.000	Hippocampus_comes
ENSUAMG00000011687	-	100	81.560	ENSMFAG00000038325	-	72	81.560	Macaca_fascicularis
ENSUAMG00000011687	-	100	81.560	ENSMMUG00000016450	-	72	81.560	Macaca_mulatta
ENSUAMG00000011687	-	100	81.560	ENSMNEG00000028851	PTBP1	72	81.560	Macaca_nemestrina
ENSUAMG00000011687	-	100	81.560	ENSMLEG00000013865	PTBP1	73	81.560	Mandrillus_leucophaeus
ENSUAMG00000011687	-	100	80.851	ENSMICG00000007131	PTBP1	72	80.851	Microcebus_murinus
ENSUAMG00000011687	-	100	70.629	ENSMALG00000013144	ptbp3	75	70.629	Monopterus_albus
ENSUAMG00000011687	-	100	80.714	ENSNBRG00000001492	-	63	80.714	Neolamprologus_brichardi
ENSUAMG00000011687	-	100	81.560	ENSNLEG00000000864	PTBP1	73	81.560	Nomascus_leucogenys
ENSUAMG00000011687	-	100	79.433	ENSOANG00000008979	-	75	79.433	Ornithorhynchus_anatinus
ENSUAMG00000011687	-	99	32.026	ENSOANG00000013257	-	64	32.026	Ornithorhynchus_anatinus
ENSUAMG00000011687	-	100	87.143	ENSOMEG00000009759	ptbp2a	85	87.143	Oryzias_melastigma
ENSUAMG00000011687	-	86	76.033	ENSPPAG00000011962	-	68	76.033	Pan_paniscus
ENSUAMG00000011687	-	100	81.560	ENSPPAG00000032109	-	75	81.560	Pan_paniscus
ENSUAMG00000011687	-	100	80.851	ENSPPRG00000006787	PTBP1	72	80.851	Panthera_pardus
ENSUAMG00000011687	-	100	81.560	ENSPTRG00000010165	PTBP1	75	81.560	Pan_troglodytes
ENSUAMG00000011687	-	100	81.560	ENSPANG00000007281	PTBP1	72	81.560	Papio_anubis
ENSUAMG00000011687	-	100	74.468	ENSPMGG00000020540	-	76	72.340	Periophthalmus_magnuspinnatus
ENSUAMG00000011687	-	100	67.376	ENSPMAG00000007617	-	87	67.376	Petromyzon_marinus
ENSUAMG00000011687	-	100	73.759	ENSPREG00000000963	-	100	73.759	Poecilia_reticulata
ENSUAMG00000011687	-	100	80.851	ENSPCOG00000015093	PTBP1	72	80.851	Propithecus_coquereli
ENSUAMG00000011687	-	100	65.714	ENSPNYG00000005126	-	76	65.714	Pundamilia_nyererei
ENSUAMG00000011687	-	100	70.213	ENSRBIG00000007193	-	70	70.213	Rhinopithecus_bieti
ENSUAMG00000011687	-	100	63.121	ENSRBIG00000026293	-	72	63.121	Rhinopithecus_bieti
ENSUAMG00000011687	-	100	81.560	ENSRBIG00000044228	PTBP1	72	81.560	Rhinopithecus_bieti
ENSUAMG00000011687	-	100	81.560	ENSRROG00000016534	PTBP1	72	81.560	Rhinopithecus_roxellana
ENSUAMG00000011687	-	100	58.156	ENSRROG00000021572	-	66	58.156	Rhinopithecus_roxellana
ENSUAMG00000011687	-	100	64.539	ENSRROG00000044920	-	72	64.539	Rhinopithecus_roxellana
ENSUAMG00000011687	-	100	80.851	ENSSBOG00000034376	-	73	80.851	Saimiri_boliviensis_boliviensis
ENSUAMG00000011687	-	70	79.592	ENSSLDG00000009104	-	76	79.592	Seriola_lalandi_dorsalis
ENSUAMG00000011687	-	100	61.538	ENSSPAG00000008968	-	84	61.538	Stegastes_partitus
ENSUAMG00000011687	-	100	87.143	ENSTRUG00000000761	ptbp2a	93	87.143	Takifugu_rubripes
ENSUAMG00000011687	-	100	80.851	ENSUMAG00000005396	-	97	80.851	Ursus_maritimus
ENSUAMG00000011687	-	89	33.582	ENSXETG00000033350	HNRNPLL	53	33.582	Xenopus_tropicalis
ENSUAMG00000011687	-	100	82.143	ENSXCOG00000007998	ptbp2b	71	73.239	Xiphophorus_couchianus