EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000011977 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 4474 bases
Position: chrLZNR01000924.1:35264-39737
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000014927	KH_1	PF00013.29	2.3e-07	1	1
ENSUAMP00000014927	zf-CCHC	PF00098.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000016734	SF1-201	1548	-	ENSUAMP00000014927	515 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000011977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000011977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000011977	SF1	82	96.270	ENSAMEG00000017828	SF1	66	96.244	Ailuropoda_melanoleuca
ENSUAMG00000011977	SF1	100	97.328	ENSANAG00000026664	-	82	97.328	Aotus_nancymaae
ENSUAMG00000011977	SF1	97	86.417	ENSANAG00000022607	-	84	86.774	Aotus_nancymaae
ENSUAMG00000011977	SF1	100	97.137	ENSBTAG00000001035	SF1	82	97.137	Bos_taurus
ENSUAMG00000011977	SF1	100	97.137	ENSCJAG00000002780	SF1	82	97.137	Callithrix_jacchus
ENSUAMG00000011977	SF1	92	96.488	ENSCAFG00000014239	SF1	76	96.488	Canis_familiaris
ENSUAMG00000011977	SF1	100	97.137	ENSCAFG00020014381	SF1	82	97.137	Canis_lupus_dingo
ENSUAMG00000011977	SF1	100	97.137	ENSCHIG00000025867	SF1	82	97.137	Capra_hircus
ENSUAMG00000011977	SF1	58	77.181	ENSTSYG00000033618	SF1	51	99.425	Carlito_syrichta
ENSUAMG00000011977	SF1	63	93.750	ENSCAPG00000010762	SF1	60	93.750	Cavia_aperea
ENSUAMG00000011977	SF1	92	96.074	ENSCPOG00000012290	SF1	77	96.074	Cavia_porcellus
ENSUAMG00000011977	SF1	100	76.493	ENSCCAG00000023781	-	86	79.707	Cebus_capucinus
ENSUAMG00000011977	SF1	97	93.849	ENSCCAG00000037881	SF1	76	96.488	Cebus_capucinus
ENSUAMG00000011977	SF1	100	97.137	ENSCATG00000011564	SF1	82	97.137	Cercocebus_atys
ENSUAMG00000011977	SF1	79	95.894	ENSCSAG00000007258	SF1	76	95.894	Chlorocebus_sabaeus
ENSUAMG00000011977	SF1	63	95.482	ENSCHOG00000006008	SF1	63	95.482	Choloepus_hoffmanni
ENSUAMG00000011977	SF1	78	84.236	ENSCPBG00000023763	SF1	52	82.152	Chrysemys_picta_bellii
ENSUAMG00000011977	SF1	52	55.755	ENSCING00000005564	-	54	57.509	Ciona_intestinalis
ENSUAMG00000011977	SF1	100	97.137	ENSCANG00000042201	SF1	82	97.137	Colobus_angolensis_palliatus
ENSUAMG00000011977	SF1	100	96.947	ENSCGRG00001003677	Sf1	82	96.947	Cricetulus_griseus_chok1gshd
ENSUAMG00000011977	SF1	80	94.299	ENSCGRG00000001708	Sf1	78	94.299	Cricetulus_griseus_crigri
ENSUAMG00000011977	SF1	73	80.287	ENSDARG00000008188	sf1	51	77.741	Danio_rerio
ENSUAMG00000011977	SF1	79	95.411	ENSDNOG00000001282	SF1	76	95.411	Dasypus_novemcinctus
ENSUAMG00000011977	SF1	100	97.137	ENSDORG00000016334	Sf1	82	97.137	Dipodomys_ordii
ENSUAMG00000011977	SF1	92	88.750	ENSETEG00000012830	SF1	67	88.750	Echinops_telfairi
ENSUAMG00000011977	SF1	79	95.411	ENSEASG00005018272	SF1	75	95.874	Equus_asinus_asinus
ENSUAMG00000011977	SF1	79	95.652	ENSECAG00000024544	SF1	75	96.117	Equus_caballus
ENSUAMG00000011977	SF1	63	94.578	ENSEEUG00000001058	SF1	84	94.578	Erinaceus_europaeus
ENSUAMG00000011977	SF1	92	96.488	ENSFCAG00000012231	SF1	76	96.488	Felis_catus
ENSUAMG00000011977	SF1	63	94.345	ENSFDAG00000009833	SF1	60	94.345	Fukomys_damarensis
ENSUAMG00000011977	SF1	50	81.955	ENSGAFG00000019284	sf1	57	77.377	Gambusia_affinis
ENSUAMG00000011977	SF1	66	87.172	ENSGAGG00000021691	SF1	57	82.396	Gopherus_agassizii
ENSUAMG00000011977	SF1	92	96.488	ENSHGLG00000009541	SF1	76	96.488	Heterocephalus_glaber_female
ENSUAMG00000011977	SF1	66	95.690	ENSHGLG00100013879	-	65	95.690	Heterocephalus_glaber_male
ENSUAMG00000011977	SF1	65	85.319	ENSHGLG00100008255	-	74	84.765	Heterocephalus_glaber_male
ENSUAMG00000011977	SF1	67	89.017	ENSHGLG00100008076	-	70	89.213	Heterocephalus_glaber_male
ENSUAMG00000011977	SF1	100	97.137	ENSSTOG00000009790	-	83	97.137	Ictidomys_tridecemlineatus
ENSUAMG00000011977	SF1	67	86.932	ENSSTOG00000024353	-	58	90.099	Ictidomys_tridecemlineatus
ENSUAMG00000011977	SF1	100	96.947	ENSJJAG00000011788	Sf1	82	96.947	Jaculus_jaculus
ENSUAMG00000011977	SF1	57	83.498	ENSLACG00000018493	SF1	54	82.781	Latimeria_chalumnae
ENSUAMG00000011977	SF1	90	96.391	ENSLAFG00000007201	SF1	73	96.391	Loxodonta_africana
ENSUAMG00000011977	SF1	100	97.137	ENSMFAG00000033122	SF1	82	97.137	Macaca_fascicularis
ENSUAMG00000011977	SF1	100	97.137	ENSMMUG00000022606	SF1	83	97.137	Macaca_mulatta
ENSUAMG00000011977	SF1	100	97.137	ENSMNEG00000037901	SF1	82	97.137	Macaca_nemestrina
ENSUAMG00000011977	SF1	100	97.137	ENSMLEG00000040706	SF1	83	94.749	Mandrillus_leucophaeus
ENSUAMG00000011977	SF1	95	94.165	ENSMAUG00000014064	Sf1	75	96.674	Mesocricetus_auratus
ENSUAMG00000011977	SF1	100	96.947	ENSMICG00000001202	SF1	82	96.947	Microcebus_murinus
ENSUAMG00000011977	SF1	95	93.964	ENSMOCG00000022038	Sf1	75	96.466	Microtus_ochrogaster
ENSUAMG00000011977	SF1	57	93.421	ENSMODG00000029407	SF1	66	93.399	Monodelphis_domestica
ENSUAMG00000011977	SF1	100	96.756	MGP_CAROLIEiJ_G0022607	Sf1	82	96.756	Mus_caroli
ENSUAMG00000011977	SF1	100	96.756	ENSMUSG00000024949	Sf1	82	96.756	Mus_musculus
ENSUAMG00000011977	SF1	100	96.756	MGP_PahariEiJ_G0014101	Sf1	82	96.756	Mus_pahari
ENSUAMG00000011977	SF1	100	96.756	MGP_SPRETEiJ_G0023518	Sf1	82	96.756	Mus_spretus
ENSUAMG00000011977	SF1	100	96.947	ENSMPUG00000012684	SF1	82	96.947	Mustela_putorius_furo
ENSUAMG00000011977	SF1	100	96.756	ENSMLUG00000015217	-	82	96.756	Myotis_lucifugus
ENSUAMG00000011977	SF1	87	78.821	ENSMLUG00000029800	-	58	89.971	Myotis_lucifugus
ENSUAMG00000011977	SF1	92	96.674	ENSNGAG00000005550	Sf1	75	96.674	Nannospalax_galili
ENSUAMG00000011977	SF1	100	96.947	ENSNLEG00000005236	-	82	96.947	Nomascus_leucogenys
ENSUAMG00000011977	SF1	79	94.458	ENSMEUG00000013424	SF1	78	94.458	Notamacropus_eugenii
ENSUAMG00000011977	SF1	79	95.411	ENSOPRG00000005008	SF1	84	95.411	Ochotona_princeps
ENSUAMG00000011977	SF1	86	88.248	ENSODEG00000006102	-	68	85.144	Octodon_degus
ENSUAMG00000011977	SF1	70	82.927	ENSOANG00000002909	SF1	87	85.352	Ornithorhynchus_anatinus
ENSUAMG00000011977	SF1	95	94.165	ENSOCUG00000026486	SF1	76	96.674	Oryctolagus_cuniculus
ENSUAMG00000011977	SF1	86	96.674	ENSOGAG00000016196	SF1	71	96.674	Otolemur_garnettii
ENSUAMG00000011977	SF1	82	87.692	ENSOARG00000009166	SF1	62	95.739	Ovis_aries
ENSUAMG00000011977	SF1	100	97.137	ENSPPAG00000002799	-	85	97.137	Pan_paniscus
ENSUAMG00000011977	SF1	100	97.137	ENSPPRG00000013566	SF1	85	97.137	Panthera_pardus
ENSUAMG00000011977	SF1	63	94.345	ENSPTIG00000016141	SF1	60	94.345	Panthera_tigris_altaica
ENSUAMG00000011977	SF1	92	96.488	ENSPTRG00000003846	SF1	76	96.488	Pan_troglodytes
ENSUAMG00000011977	SF1	92	94.070	ENSPANG00000020754	SF1	84	94.749	Papio_anubis
ENSUAMG00000011977	SF1	55	76.871	ENSPKIG00000012116	sf1	74	75.084	Paramormyrops_kingsleyae
ENSUAMG00000011977	SF1	66	86.628	ENSPSIG00000003610	SF1	97	75.889	Pelodiscus_sinensis
ENSUAMG00000011977	SF1	95	94.165	ENSPEMG00000010463	Sf1	75	96.674	Peromyscus_maniculatus_bairdii
ENSUAMG00000011977	SF1	100	95.992	ENSPCIG00000018173	SF1	82	95.992	Phascolarctos_cinereus
ENSUAMG00000011977	SF1	92	96.488	ENSPPYG00000003098	-	78	96.126	Pongo_abelii
ENSUAMG00000011977	SF1	80	94.062	ENSPCAG00000013631	SF1	63	94.062	Procavia_capensis
ENSUAMG00000011977	SF1	100	96.947	ENSPCOG00000027546	SF1	82	96.947	Propithecus_coquereli
ENSUAMG00000011977	SF1	79	95.411	ENSPVAG00000016938	SF1	62	95.411	Pteropus_vampyrus
ENSUAMG00000011977	SF1	100	96.756	ENSRNOG00000021085	Sf1	82	96.756	Rattus_norvegicus
ENSUAMG00000011977	SF1	100	92.176	ENSRBIG00000042818	SF1	82	92.176	Rhinopithecus_bieti
ENSUAMG00000011977	SF1	79	95.894	ENSRROG00000045655	SF1	79	95.894	Rhinopithecus_roxellana
ENSUAMG00000011977	SF1	97	79.528	ENSSBOG00000022267	-	81	83.523	Saimiri_boliviensis_boliviensis
ENSUAMG00000011977	SF1	55	88.235	ENSSHAG00000006841	SF1	54	92.784	Sarcophilus_harrisii
ENSUAMG00000011977	SF1	78	94.189	ENSSARG00000008180	SF1	80	94.189	Sorex_araneus
ENSUAMG00000011977	SF1	78	79.720	ENSSPUG00000012907	SF1	71	78.089	Sphenodon_punctatus
ENSUAMG00000011977	SF1	100	96.947	ENSSSCG00000013021	SF1	100	96.947	Sus_scrofa
ENSUAMG00000011977	SF1	76	62.836	ENSTNIG00000004820	sf1	58	72.492	Tetraodon_nigroviridis
ENSUAMG00000011977	SF1	97	78.937	ENSTBEG00000013133	SF1	64	100.000	Tupaia_belangeri
ENSUAMG00000011977	SF1	78	94.189	ENSTTRG00000008857	SF1	78	94.189	Tursiops_truncatus
ENSUAMG00000011977	SF1	73	100.000	ENSUMAG00000007268	SF1	69	100.000	Ursus_maritimus
ENSUAMG00000011977	SF1	79	95.894	ENSVVUG00000028585	SF1	76	95.894	Vulpes_vulpes
ENSUAMG00000011977	SF1	97	65.649	ENSXETG00000008434	sf1	50	79.734	Xenopus_tropicalis
ENSUAMG00000011977	SF1	50	83.206	ENSXCOG00000003704	sf1	56	80.678	Xiphophorus_couchianus