EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000012080 (Gene tree)
Gene ID: -
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 12100 bases
Position: chrLZNR01000469.1:367692-379791
Accession: 29207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000015044	B3_4	PF03483.17	9.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000016869	LRRC47-201	1593	-	ENSUAMP00000015044	530 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000012080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000012080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000012080	LRRC47	97	84.047	ENSG00000130764	LRRC47	88	83.658	Homo_sapiens
ENSUAMG00000012080	LRRC47	98	54.095	ENSAPOG00000019553	lrrc47	89	55.106	Acanthochromis_polyacanthus
ENSUAMG00000012080	LRRC47	87	92.842	ENSAMEG00000009152	LRRC47	100	92.842	Ailuropoda_melanoleuca
ENSUAMG00000012080	LRRC47	73	65.803	ENSAPLG00000003167	LRRC47	100	65.206	Anas_platyrhynchos
ENSUAMG00000012080	LRRC47	72	68.602	ENSACAG00000008267	LRRC47	99	68.074	Anolis_carolinensis
ENSUAMG00000012080	LRRC47	97	83.268	ENSANAG00000025576	LRRC47	88	83.268	Aotus_nancymaae
ENSUAMG00000012080	LRRC47	97	83.821	ENSBTAG00000004738	LRRC47	88	83.821	Bos_taurus
ENSUAMG00000012080	LRRC47	97	92.593	ENSCAFG00000019492	LRRC47	87	92.593	Canis_familiaris
ENSUAMG00000012080	LRRC47	97	92.593	ENSCAFG00020009667	LRRC47	89	92.593	Canis_lupus_dingo
ENSUAMG00000012080	LRRC47	97	84.600	ENSCHIG00000022607	LRRC47	88	84.600	Capra_hircus
ENSUAMG00000012080	LRRC47	97	81.712	ENSTSYG00000009326	LRRC47	88	83.658	Carlito_syrichta
ENSUAMG00000012080	LRRC47	71	76.393	ENSCAPG00000016517	LRRC47	100	75.862	Cavia_aperea
ENSUAMG00000012080	LRRC47	97	80.897	ENSCPOG00000014931	LRRC47	85	80.507	Cavia_porcellus
ENSUAMG00000012080	LRRC47	97	83.658	ENSCCAG00000024895	LRRC47	88	83.658	Cebus_capucinus
ENSUAMG00000012080	LRRC47	97	84.047	ENSCATG00000029337	LRRC47	88	83.463	Cercocebus_atys
ENSUAMG00000012080	LRRC47	97	80.702	ENSCLAG00000006093	LRRC47	88	80.507	Chinchilla_lanigera
ENSUAMG00000012080	LRRC47	97	84.436	ENSCSAG00000000727	LRRC47	88	83.852	Chlorocebus_sabaeus
ENSUAMG00000012080	LRRC47	97	65.348	ENSCPBG00000019404	LRRC47	90	64.595	Chrysemys_picta_bellii
ENSUAMG00000012080	LRRC47	86	81.345	ENSCANG00000030701	LRRC47	96	80.694	Colobus_angolensis_palliatus
ENSUAMG00000012080	LRRC47	97	77.583	ENSCGRG00001015159	Lrrc47	80	76.608	Cricetulus_griseus_chok1gshd
ENSUAMG00000012080	LRRC47	72	71.316	ENSCGRG00000017336	Lrrc47	100	70.822	Cricetulus_griseus_crigri
ENSUAMG00000012080	LRRC47	96	53.740	ENSCSEG00000006217	lrrc47	84	53.740	Cynoglossus_semilaevis
ENSUAMG00000012080	LRRC47	71	75.532	ENSDORG00000016594	Lrrc47	99	75.532	Dipodomys_ordii
ENSUAMG00000012080	LRRC47	97	86.187	ENSEASG00005021788	LRRC47	88	86.187	Equus_asinus_asinus
ENSUAMG00000012080	LRRC47	97	85.992	ENSECAG00000022472	LRRC47	80	85.992	Equus_caballus
ENSUAMG00000012080	LRRC47	98	52.652	ENSELUG00000017544	lrrc47	88	52.652	Esox_lucius
ENSUAMG00000012080	LRRC47	91	89.648	ENSFCAG00000011632	LRRC47	85	89.648	Felis_catus
ENSUAMG00000012080	LRRC47	81	63.972	ENSFALG00000009631	LRRC47	99	61.883	Ficedula_albicollis
ENSUAMG00000012080	LRRC47	96	51.468	ENSGMOG00000015674	lrrc47	87	51.562	Gadus_morhua
ENSUAMG00000012080	LRRC47	97	62.741	ENSGALG00000050995	LRRC47	89	64.093	Gallus_gallus
ENSUAMG00000012080	LRRC47	98	53.282	ENSGACG00000005550	lrrc47	89	53.372	Gasterosteus_aculeatus
ENSUAMG00000012080	LRRC47	97	64.030	ENSGAGG00000022584	LRRC47	88	64.030	Gopherus_agassizii
ENSUAMG00000012080	LRRC47	97	84.436	ENSGGOG00000015571	LRRC47	88	84.047	Gorilla_gorilla
ENSUAMG00000012080	LRRC47	97	80.545	ENSHGLG00000018278	LRRC47	85	79.727	Heterocephalus_glaber_female
ENSUAMG00000012080	LRRC47	76	77.037	ENSHGLG00100008507	LRRC47	100	76.238	Heterocephalus_glaber_male
ENSUAMG00000012080	LRRC47	98	54.198	ENSHCOG00000006348	lrrc47	87	54.826	Hippocampus_comes
ENSUAMG00000012080	LRRC47	97	82.012	ENSSTOG00000027559	LRRC47	88	82.205	Ictidomys_tridecemlineatus
ENSUAMG00000012080	LRRC47	97	81.676	ENSJJAG00000017474	Lrrc47	85	81.676	Jaculus_jaculus
ENSUAMG00000012080	LRRC47	98	54.111	ENSKMAG00000003414	lrrc47	89	53.565	Kryptolebias_marmoratus
ENSUAMG00000012080	LRRC47	97	81.907	ENSLAFG00000011657	LRRC47	88	81.907	Loxodonta_africana
ENSUAMG00000012080	LRRC47	97	63.048	ENSMFAG00000045730	LRRC47	76	94.891	Macaca_fascicularis
ENSUAMG00000012080	LRRC47	97	84.047	ENSMNEG00000042488	LRRC47	88	83.463	Macaca_nemestrina
ENSUAMG00000012080	LRRC47	84	80.266	ENSMLEG00000043735	LRRC47	91	79.601	Mandrillus_leucophaeus
ENSUAMG00000012080	LRRC47	97	79.142	ENSMAUG00000021337	Lrrc47	87	78.168	Mesocricetus_auratus
ENSUAMG00000012080	LRRC47	97	80.702	ENSMICG00000026816	LRRC47	88	81.712	Microcebus_murinus
ENSUAMG00000012080	LRRC47	97	79.727	ENSMOCG00000021279	Lrrc47	88	78.363	Microtus_ochrogaster
ENSUAMG00000012080	LRRC47	99	52.661	ENSMMOG00000017007	lrrc47	89	54.008	Mola_mola
ENSUAMG00000012080	LRRC47	86	54.393	ENSMODG00000006554	LRRC47	87	71.150	Monodelphis_domestica
ENSUAMG00000012080	LRRC47	97	79.922	MGP_CAROLIEiJ_G0026864	Lrrc47	88	78.752	Mus_caroli
ENSUAMG00000012080	LRRC47	97	80.117	ENSMUSG00000029028	Lrrc47	88	78.947	Mus_musculus
ENSUAMG00000012080	LRRC47	97	78.947	MGP_PahariEiJ_G0029212	Lrrc47	88	78.752	Mus_pahari
ENSUAMG00000012080	LRRC47	97	79.727	MGP_SPRETEiJ_G0027857	Lrrc47	88	78.558	Mus_spretus
ENSUAMG00000012080	LRRC47	71	91.005	ENSMPUG00000007321	LRRC47	75	91.005	Mustela_putorius_furo
ENSUAMG00000012080	LRRC47	97	79.922	ENSNGAG00000022153	Lrrc47	88	80.702	Nannospalax_galili
ENSUAMG00000012080	LRRC47	98	82.819	ENSNLEG00000008131	LRRC47	91	82.432	Nomascus_leucogenys
ENSUAMG00000012080	LRRC47	92	79.184	ENSODEG00000010882	LRRC47	93	78.980	Octodon_degus
ENSUAMG00000012080	LRRC47	94	56.436	ENSORLG00000002532	lrrc47	89	56.487	Oryzias_latipes
ENSUAMG00000012080	LRRC47	98	56.597	ENSORLG00020019601	lrrc47	89	56.647	Oryzias_latipes_hni
ENSUAMG00000012080	LRRC47	98	56.023	ENSORLG00015014040	lrrc47	89	56.069	Oryzias_latipes_hsok
ENSUAMG00000012080	LRRC47	98	56.647	ENSOMEG00000008989	lrrc47	89	56.647	Oryzias_melastigma
ENSUAMG00000012080	LRRC47	97	81.907	ENSOGAG00000001553	LRRC47	88	81.323	Otolemur_garnettii
ENSUAMG00000012080	LRRC47	97	79.922	ENSOARG00000015290	LRRC47	88	79.922	Ovis_aries
ENSUAMG00000012080	LRRC47	80	81.733	ENSPPAG00000036370	-	92	81.265	Pan_paniscus
ENSUAMG00000012080	LRRC47	97	89.669	ENSPPRG00000005261	LRRC47	88	89.669	Panthera_pardus
ENSUAMG00000012080	LRRC47	97	84.241	ENSPTRG00000000068	LRRC47	88	83.852	Pan_troglodytes
ENSUAMG00000012080	LRRC47	97	84.047	ENSPANG00000012437	LRRC47	88	83.463	Papio_anubis
ENSUAMG00000012080	LRRC47	72	67.895	ENSPSIG00000004196	LRRC47	100	67.368	Pelodiscus_sinensis
ENSUAMG00000012080	LRRC47	71	76.127	ENSPEMG00000021068	Lrrc47	100	74.005	Peromyscus_maniculatus_bairdii
ENSUAMG00000012080	LRRC47	97	73.541	ENSPCIG00000003638	LRRC47	87	73.930	Phascolarctos_cinereus
ENSUAMG00000012080	LRRC47	92	54.918	ENSPFOG00000000992	lrrc47	84	54.713	Poecilia_formosa
ENSUAMG00000012080	LRRC47	98	55.405	ENSPLAG00000008077	lrrc47	89	55.212	Poecilia_latipinna
ENSUAMG00000012080	LRRC47	98	55.385	ENSPMEG00000007367	lrrc47	89	55.019	Poecilia_mexicana
ENSUAMG00000012080	LRRC47	97	84.436	ENSPPYG00000001960	LRRC47	88	84.047	Pongo_abelii
ENSUAMG00000012080	LRRC47	97	80.702	ENSPCOG00000019161	LRRC47	88	81.907	Propithecus_coquereli
ENSUAMG00000012080	LRRC47	97	84.241	ENSPVAG00000009839	LRRC47	88	83.852	Pteropus_vampyrus
ENSUAMG00000012080	LRRC47	97	54.563	ENSPNAG00000017982	lrrc47	89	53.551	Pygocentrus_nattereri
ENSUAMG00000012080	LRRC47	97	79.922	ENSRNOG00000024796	Lrrc47	88	78.752	Rattus_norvegicus
ENSUAMG00000012080	LRRC47	97	84.436	ENSRBIG00000019437	LRRC47	88	83.852	Rhinopithecus_bieti
ENSUAMG00000012080	LRRC47	97	84.436	ENSRROG00000043182	LRRC47	88	83.852	Rhinopithecus_roxellana
ENSUAMG00000012080	LRRC47	89	79.832	ENSSBOG00000026334	LRRC47	97	79.832	Saimiri_boliviensis_boliviensis
ENSUAMG00000012080	LRRC47	96	61.240	ENSSHAG00000007360	LRRC47	87	61.628	Sarcophilus_harrisii
ENSUAMG00000012080	LRRC47	98	55.238	ENSSMAG00000009344	lrrc47	89	56.069	Scophthalmus_maximus
ENSUAMG00000012080	LRRC47	98	53.346	ENSSDUG00000014618	lrrc47	89	53.565	Seriola_dumerili
ENSUAMG00000012080	LRRC47	98	54.111	ENSSLDG00000018908	lrrc47	89	54.143	Seriola_lalandi_dorsalis
ENSUAMG00000012080	LRRC47	95	64.217	ENSSPUG00000010277	LRRC47	88	64.231	Sphenodon_punctatus
ENSUAMG00000012080	LRRC47	98	55.048	ENSSPAG00000005188	lrrc47	89	56.069	Stegastes_partitus
ENSUAMG00000012080	LRRC47	97	84.211	ENSSSCG00000039516	LRRC47	88	84.211	Sus_scrofa
ENSUAMG00000012080	LRRC47	77	64.706	ENSTGUG00000002737	LRRC47	99	64.706	Taeniopygia_guttata
ENSUAMG00000012080	LRRC47	99	53.493	ENSTRUG00000017696	lrrc47	89	54.633	Takifugu_rubripes
ENSUAMG00000012080	LRRC47	98	54.023	ENSTNIG00000010923	lrrc47	89	54.023	Tetraodon_nigroviridis
ENSUAMG00000012080	LRRC47	97	84.241	ENSTTRG00000011751	LRRC47	88	84.241	Tursiops_truncatus
ENSUAMG00000012080	LRRC47	72	98.425	ENSUMAG00000010781	LRRC47	81	98.425	Ursus_maritimus
ENSUAMG00000012080	LRRC47	97	87.135	ENSVVUG00000027118	LRRC47	87	87.135	Vulpes_vulpes
ENSUAMG00000012080	LRRC47	96	60.078	ENSXETG00000006029	lrrc47	87	60.078	Xenopus_tropicalis
ENSUAMG00000012080	LRRC47	98	55.598	ENSXCOG00000002813	lrrc47	89	55.019	Xiphophorus_couchianus
ENSUAMG00000012080	LRRC47	98	55.019	ENSXMAG00000019386	lrrc47	90	54.826	Xiphophorus_maculatus