EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000012299 (Gene tree)
Gene ID: -
Gene Symbol: ARL5C
Alias: ARL12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 4912 bases
Position: chrLZNR01005607.1:22166-27077
Accession: 31111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000015358	MMR_HSR1	PF01926.23	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000017214	ARL5C-201	540	-	ENSUAMP00000015358	179 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000012299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000012299's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000012299	ARL5C	92	37.647	ENSUAMG00000009531	ARL11	93	37.647
ENSUAMG00000012299	ARL5C	98	45.455	ENSUAMG00000020632	ARF4	98	45.455
ENSUAMG00000012299	ARL5C	98	40.331	ENSUAMG00000004582	ARL6	97	40.331
ENSUAMG00000012299	ARL5C	88	41.772	ENSUAMG00000012246	-	86	41.772
ENSUAMG00000012299	ARL5C	74	32.331	ENSUAMG00000005136	ARL10	54	32.090
ENSUAMG00000012299	ARL5C	87	41.772	ENSUAMG00000020459	ARL14	87	41.772
ENSUAMG00000012299	ARL5C	87	41.975	ENSUAMG00000009218	ARL4A	81	41.975
ENSUAMG00000012299	ARL5C	87	42.945	ENSUAMG00000007888	ARL4C	84	42.945
ENSUAMG00000012299	ARL5C	98	77.714	ENSUAMG00000014901	ARL5B	97	77.714
ENSUAMG00000012299	ARL5C	98	47.159	ENSUAMG00000027074	-	97	47.159
ENSUAMG00000012299	ARL5C	92	45.455	ENSUAMG00000026665	ARL3	91	45.455
ENSUAMG00000012299	ARL5C	86	35.625	ENSUAMG00000017970	ARL4D	80	35.625
ENSUAMG00000012299	ARL5C	98	48.864	ENSUAMG00000016459	ARF1	97	48.864
ENSUAMG00000012299	ARL5C	96	46.243	ENSUAMG00000012982	ARF5	96	46.243
ENSUAMG00000012299	ARL5C	98	47.727	ENSUAMG00000027265	-	97	47.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000012299	ARL5C	100	93.855	ENSAMEG00000004195	ARL5C	99	93.855	Ailuropoda_melanoleuca
ENSUAMG00000012299	ARL5C	99	81.461	ENSACAG00000003879	-	99	81.461	Anolis_carolinensis
ENSUAMG00000012299	ARL5C	100	93.855	ENSCAFG00000016525	ARL5C	100	93.855	Canis_familiaris
ENSUAMG00000012299	ARL5C	100	88.268	ENSCHIG00000008208	ARL5C	100	88.268	Capra_hircus
ENSUAMG00000012299	ARL5C	59	84.906	ENSCHOG00000013232	-	100	84.906	Choloepus_hoffmanni
ENSUAMG00000012299	ARL5C	99	79.096	ENSCGRG00001000695	Arl5c	99	79.096	Cricetulus_griseus_chok1gshd
ENSUAMG00000012299	ARL5C	99	79.661	ENSCGRG00000007376	Arl5c	99	79.661	Cricetulus_griseus_crigri
ENSUAMG00000012299	ARL5C	100	88.268	ENSDNOG00000019741	ARL5C	100	88.268	Dasypus_novemcinctus
ENSUAMG00000012299	ARL5C	99	87.640	ENSDORG00000016304	Arl5c	99	87.640	Dipodomys_ordii
ENSUAMG00000012299	ARL5C	92	89.634	ENSEASG00005001922	ARL5C	76	89.634	Equus_asinus_asinus
ENSUAMG00000012299	ARL5C	100	90.503	ENSECAG00000009024	ARL5C	100	90.503	Equus_caballus
ENSUAMG00000012299	ARL5C	100	91.620	ENSFCAG00000009962	ARL5C	100	91.620	Felis_catus
ENSUAMG00000012299	ARL5C	100	91.061	ENSSTOG00000011104	ARL5C	100	91.061	Ictidomys_tridecemlineatus
ENSUAMG00000012299	ARL5C	100	79.888	ENSLACG00000015332	ARL5C	100	79.888	Latimeria_chalumnae
ENSUAMG00000012299	ARL5C	100	89.944	ENSLAFG00000018248	ARL5C	99	89.944	Loxodonta_africana
ENSUAMG00000012299	ARL5C	99	76.271	ENSMAUG00000012845	Arl5c	87	76.271	Mesocricetus_auratus
ENSUAMG00000012299	ARL5C	100	89.944	ENSMICG00000002661	ARL5C	100	89.944	Microcebus_murinus
ENSUAMG00000012299	ARL5C	100	76.536	ENSMOCG00000000234	Arl5c	100	76.536	Microtus_ochrogaster
ENSUAMG00000012299	ARL5C	100	87.709	MGP_CAROLIEiJ_G0017071	Arl5c	100	87.709	Mus_caroli
ENSUAMG00000012299	ARL5C	100	87.151	ENSMUSG00000038352	Arl5c	100	87.151	Mus_musculus
ENSUAMG00000012299	ARL5C	100	87.709	MGP_PahariEiJ_G0018200	Arl5c	100	87.709	Mus_pahari
ENSUAMG00000012299	ARL5C	100	87.151	MGP_SPRETEiJ_G0017917	Arl5c	100	87.151	Mus_spretus
ENSUAMG00000012299	ARL5C	100	88.827	ENSMLUG00000030149	ARL5C	99	88.827	Myotis_lucifugus
ENSUAMG00000012299	ARL5C	100	87.151	ENSOGAG00000005894	ARL5C	100	87.151	Otolemur_garnettii
ENSUAMG00000012299	ARL5C	100	88.827	ENSOARG00000010377	ARL5C	99	88.827	Ovis_aries
ENSUAMG00000012299	ARL5C	100	92.737	ENSPPRG00000000975	ARL5C	100	92.737	Panthera_pardus
ENSUAMG00000012299	ARL5C	100	91.620	ENSPTIG00000017487	ARL5C	100	91.620	Panthera_tigris_altaica
ENSUAMG00000012299	ARL5C	99	87.571	ENSPEMG00000008932	Arl5c	99	87.571	Peromyscus_maniculatus_bairdii
ENSUAMG00000012299	ARL5C	100	91.061	ENSPCOG00000028489	ARL5C	100	91.061	Propithecus_coquereli
ENSUAMG00000012299	ARL5C	94	89.286	ENSPVAG00000008495	ARL5C	99	89.286	Pteropus_vampyrus
ENSUAMG00000012299	ARL5C	100	84.916	ENSRNOG00000036880	Arl5c	100	84.916	Rattus_norvegicus
ENSUAMG00000012299	ARL5C	98	73.864	ENSSBOG00000021022	ARL5C	100	73.864	Saimiri_boliviensis_boliviensis
ENSUAMG00000012299	ARL5C	96	83.041	ENSSPUG00000007555	ARL5C	100	84.663	Sphenodon_punctatus
ENSUAMG00000012299	ARL5C	100	88.827	ENSTBEG00000007274	ARL5C	100	88.827	Tupaia_belangeri
ENSUAMG00000012299	ARL5C	100	99.441	ENSUMAG00000017197	ARL5C	100	99.441	Ursus_maritimus
ENSUAMG00000012299	ARL5C	100	75.978	ENSXETG00000023713	arl5c	92	75.978	Xenopus_tropicalis