EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000012343 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 18399 bases
Position: chrLZNR01014948.1:15803-34201
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000015412	Caprin-1_C	PF12287.8	2.6e-116	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000017273	-	1473	-	ENSUAMP00000015412	490 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000012343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000012343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000012343	-	100	40.590	ENSAPOG00000019808	caprin2	57	41.620	Acanthochromis_polyacanthus
ENSUAMG00000012343	-	100	39.962	ENSAOCG00000013014	caprin2	55	40.637	Amphiprion_ocellaris
ENSUAMG00000012343	-	100	42.911	ENSACLG00000015175	-	55	42.911	Astatotilapia_calliptera
ENSUAMG00000012343	-	100	44.505	ENSAMXG00000007266	caprin2	56	44.505	Astyanax_mexicanus
ENSUAMG00000012343	-	87	90.023	ENSCAPG00000008699	-	94	90.023	Cavia_aperea
ENSUAMG00000012343	-	100	89.881	ENSCPOG00000006625	CAPRIN2	62	90.079	Cavia_porcellus
ENSUAMG00000012343	-	100	91.270	ENSCCAG00000027709	CAPRIN2	100	91.270	Cebus_capucinus
ENSUAMG00000012343	-	100	91.667	ENSCATG00000031463	CAPRIN2	100	91.667	Cercocebus_atys
ENSUAMG00000012343	-	100	88.605	ENSCLAG00000001513	CAPRIN2	62	88.802	Chinchilla_lanigera
ENSUAMG00000012343	-	100	80.119	ENSCGRG00001002901	Caprin2	61	80.119	Cricetulus_griseus_chok1gshd
ENSUAMG00000012343	-	100	73.523	ENSCGRG00000001249	Caprin2	60	73.523	Cricetulus_griseus_crigri
ENSUAMG00000012343	-	100	43.893	ENSDARG00000020749	caprin2	54	43.893	Danio_rerio
ENSUAMG00000012343	-	100	80.556	ENSDNOG00000009793	CAPRIN2	51	80.556	Dasypus_novemcinctus
ENSUAMG00000012343	-	100	82.341	ENSDORG00000012639	Caprin2	66	82.341	Dipodomys_ordii
ENSUAMG00000012343	-	100	70.833	ENSETEG00000011498	-	51	70.833	Echinops_telfairi
ENSUAMG00000012343	-	100	41.366	ENSFHEG00000004435	caprin2	54	41.366	Fundulus_heteroclitus
ENSUAMG00000012343	-	100	41.683	ENSGAFG00000020084	caprin2	54	41.683	Gambusia_affinis
ENSUAMG00000012343	-	100	41.973	ENSGACG00000019233	caprin2	54	41.973	Gasterosteus_aculeatus
ENSUAMG00000012343	-	60	30.293	ENSGACG00000015620	caprin1a	59	30.476	Gasterosteus_aculeatus
ENSUAMG00000012343	-	100	44.045	ENSHBUG00000012107	-	56	44.045	Haplochromis_burtoni
ENSUAMG00000012343	-	100	87.103	ENSHGLG00000007117	CAPRIN2	61	87.103	Heterocephalus_glaber_female
ENSUAMG00000012343	-	59	35.350	ENSHGLG00100011428	-	51	35.826	Heterocephalus_glaber_male
ENSUAMG00000012343	-	100	40.506	ENSIPUG00000016517	caprin2	55	40.506	Ictalurus_punctatus
ENSUAMG00000012343	-	100	88.713	ENSSTOG00000004672	CAPRIN2	51	88.713	Ictidomys_tridecemlineatus
ENSUAMG00000012343	-	100	78.968	ENSJJAG00000018136	Caprin2	62	78.968	Jaculus_jaculus
ENSUAMG00000012343	-	100	40.566	ENSKMAG00000011810	caprin2	55	40.566	Kryptolebias_marmoratus
ENSUAMG00000012343	-	100	42.724	ENSLBEG00000028194	caprin2	54	42.724	Labrus_bergylta
ENSUAMG00000012343	-	100	63.443	ENSLACG00000006297	CAPRIN2	56	58.707	Latimeria_chalumnae
ENSUAMG00000012343	-	98	91.667	ENSMMUG00000001359	CAPRIN2	99	91.667	Macaca_mulatta
ENSUAMG00000012343	-	100	91.865	ENSMNEG00000029750	CAPRIN2	100	91.865	Macaca_nemestrina
ENSUAMG00000012343	-	100	41.651	ENSMAMG00000023305	caprin2	55	41.651	Mastacembelus_armatus
ENSUAMG00000012343	-	100	43.289	ENSMZEG00005008191	-	55	43.289	Maylandia_zebra
ENSUAMG00000012343	-	100	80.754	ENSMAUG00000008195	Caprin2	61	80.754	Mesocricetus_auratus
ENSUAMG00000012343	-	100	92.659	ENSMICG00000010650	CAPRIN2	100	92.659	Microcebus_murinus
ENSUAMG00000012343	-	100	42.914	ENSMALG00000020970	caprin2	53	42.914	Monopterus_albus
ENSUAMG00000012343	-	100	80.830	MGP_CAROLIEiJ_G0029073	Caprin2	91	66.667	Mus_caroli
ENSUAMG00000012343	-	59	36.196	MGP_CAROLIEiJ_G0024019	Caprin1	78	43.646	Mus_caroli
ENSUAMG00000012343	-	100	80.435	ENSMUSG00000030309	Caprin2	91	66.026	Mus_musculus
ENSUAMG00000012343	-	59	35.890	ENSMUSG00000027184	Caprin1	78	44.199	Mus_musculus
ENSUAMG00000012343	-	59	35.714	MGP_PahariEiJ_G0025455	Caprin1	78	43.646	Mus_pahari
ENSUAMG00000012343	-	100	81.423	MGP_PahariEiJ_G0022834	Caprin2	91	67.308	Mus_pahari
ENSUAMG00000012343	-	100	80.435	MGP_SPRETEiJ_G0030128	Caprin2	91	66.026	Mus_spretus
ENSUAMG00000012343	-	59	36.810	MGP_SPRETEiJ_G0024929	Caprin1	78	44.199	Mus_spretus
ENSUAMG00000012343	-	53	34.219	ENSMPUG00000016417	-	87	34.219	Mustela_putorius_furo
ENSUAMG00000012343	-	59	35.110	ENSOPRG00000009733	CAPRIN1	51	35.583	Ochotona_princeps
ENSUAMG00000012343	-	100	81.944	ENSOPRG00000011491	CAPRIN2	51	81.944	Ochotona_princeps
ENSUAMG00000012343	-	100	43.364	ENSONIG00000012027	caprin2	56	43.364	Oreochromis_niloticus
ENSUAMG00000012343	-	60	62.333	ENSOANG00000011395	-	87	62.333	Ornithorhynchus_anatinus
ENSUAMG00000012343	-	100	40.850	ENSORLG00000012576	orla-b2m	55	40.850	Oryzias_latipes
ENSUAMG00000012343	-	100	43.922	ENSPKIG00000017980	caprin2	53	43.922	Paramormyrops_kingsleyae
ENSUAMG00000012343	-	100	83.532	ENSPEMG00000006778	Caprin2	61	83.532	Peromyscus_maniculatus_bairdii
ENSUAMG00000012343	-	53	64.855	ENSPMAG00000008004	-	98	64.855	Petromyzon_marinus
ENSUAMG00000012343	-	100	42.095	ENSPMEG00000020786	caprin2	54	42.095	Poecilia_mexicana
ENSUAMG00000012343	-	59	34.796	ENSPPYG00000029386	-	74	35.276	Pongo_abelii
ENSUAMG00000012343	-	60	30.449	ENSPNYG00000007569	caprin1a	56	30.449	Pundamilia_nyererei
ENSUAMG00000012343	-	100	43.407	ENSPNAG00000017781	caprin2	57	43.682	Pygocentrus_nattereri
ENSUAMG00000012343	-	100	76.587	ENSRNOG00000047319	Caprin2	61	76.143	Rattus_norvegicus
ENSUAMG00000012343	-	100	91.865	ENSRBIG00000033178	CAPRIN2	100	91.865	Rhinopithecus_bieti
ENSUAMG00000012343	-	100	91.865	ENSRROG00000033123	CAPRIN2	54	91.865	Rhinopithecus_roxellana
ENSUAMG00000012343	-	58	35.032	ENSSHAG00000002731	CAPRIN1	77	36.164	Sarcophilus_harrisii
ENSUAMG00000012343	-	80	57.108	ENSSFOG00015022679	caprin2	77	57.108	Scleropages_formosus
ENSUAMG00000012343	-	100	41.021	ENSSMAG00000016174	caprin2	56	41.021	Scophthalmus_maximus
ENSUAMG00000012343	-	100	44.278	ENSSDUG00000019919	caprin2	58	44.278	Seriola_dumerili
ENSUAMG00000012343	-	100	54.190	ENSXETG00000007516	caprin2	55	54.004	Xenopus_tropicalis