EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000012385 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 25156 bases
Position: chrLZNR01014963.1:5-25160
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000015471	SRP54	PF00448.22	1.5e-63	1	1
ENSUAMP00000015471	SRP54_N	PF02881.19	9.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000017340	SRP54-201	1058	-	ENSUAMP00000015471	262 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000012385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000012385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000012385	SRP54	100	100.000	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSUAMG00000012385	SRP54	100	96.565	ENSAPOG00000011314	srp54	52	96.565	Acanthochromis_polyacanthus
ENSUAMG00000012385	SRP54	100	100.000	ENSAMEG00000015544	SRP54	52	100.000	Ailuropoda_melanoleuca
ENSUAMG00000012385	SRP54	100	96.565	ENSACIG00000022831	srp54	57	96.565	Amphilophus_citrinellus
ENSUAMG00000012385	SRP54	100	96.565	ENSAOCG00000019401	srp54	52	96.565	Amphiprion_ocellaris
ENSUAMG00000012385	SRP54	100	96.565	ENSAPEG00000001977	srp54	52	96.565	Amphiprion_percula
ENSUAMG00000012385	SRP54	100	97.328	ENSATEG00000013877	srp54	52	97.328	Anabas_testudineus
ENSUAMG00000012385	SRP54	100	98.855	ENSAPLG00000010125	SRP54	52	98.855	Anas_platyrhynchos
ENSUAMG00000012385	SRP54	100	98.855	ENSACAG00000002103	-	52	98.855	Anolis_carolinensis
ENSUAMG00000012385	SRP54	100	100.000	ENSANAG00000022133	SRP54	87	91.304	Aotus_nancymaae
ENSUAMG00000012385	SRP54	100	96.947	ENSACLG00000015866	srp54	52	96.947	Astatotilapia_calliptera
ENSUAMG00000012385	SRP54	100	96.183	ENSAMXG00000032669	SRP54	52	96.183	Astyanax_mexicanus
ENSUAMG00000012385	SRP54	100	100.000	ENSBTAG00000019085	SRP54	52	100.000	Bos_taurus
ENSUAMG00000012385	SRP54	100	77.481	WBGene00009012	F21D5.7	53	77.481	Caenorhabditis_elegans
ENSUAMG00000012385	SRP54	100	100.000	ENSCJAG00000006581	SRP54	87	91.304	Callithrix_jacchus
ENSUAMG00000012385	SRP54	100	100.000	ENSCAFG00000013331	SRP54	52	100.000	Canis_familiaris
ENSUAMG00000012385	SRP54	100	100.000	ENSCAFG00020023427	SRP54	52	100.000	Canis_lupus_dingo
ENSUAMG00000012385	SRP54	100	100.000	ENSCHIG00000026345	SRP54	52	100.000	Capra_hircus
ENSUAMG00000012385	SRP54	100	99.618	ENSTSYG00000002680	-	52	99.618	Carlito_syrichta
ENSUAMG00000012385	SRP54	100	92.366	ENSTSYG00000035333	-	54	92.366	Carlito_syrichta
ENSUAMG00000012385	SRP54	100	61.871	ENSCAPG00000008780	SRP54	59	61.871	Cavia_aperea
ENSUAMG00000012385	SRP54	100	99.237	ENSCPOG00000003691	SRP54	52	99.237	Cavia_porcellus
ENSUAMG00000012385	SRP54	100	100.000	ENSCATG00000034083	SRP54	87	91.304	Cercocebus_atys
ENSUAMG00000012385	SRP54	100	100.000	ENSCLAG00000015076	SRP54	52	100.000	Chinchilla_lanigera
ENSUAMG00000012385	SRP54	100	100.000	ENSCSAG00000015575	SRP54	52	100.000	Chlorocebus_sabaeus
ENSUAMG00000012385	SRP54	100	84.351	ENSCHOG00000008986	SRP54	55	84.351	Choloepus_hoffmanni
ENSUAMG00000012385	SRP54	100	99.237	ENSCPBG00000026195	SRP54	52	99.237	Chrysemys_picta_bellii
ENSUAMG00000012385	SRP54	100	87.786	ENSCING00000007380	-	52	87.786	Ciona_intestinalis
ENSUAMG00000012385	SRP54	100	100.000	ENSCANG00000028532	SRP54	87	91.304	Colobus_angolensis_palliatus
ENSUAMG00000012385	SRP54	100	99.237	ENSCGRG00001009525	-	52	99.237	Cricetulus_griseus_chok1gshd
ENSUAMG00000012385	SRP54	100	99.237	ENSCGRG00000009453	-	60	99.237	Cricetulus_griseus_crigri
ENSUAMG00000012385	SRP54	100	95.802	ENSCSEG00000012392	srp54	52	95.802	Cynoglossus_semilaevis
ENSUAMG00000012385	SRP54	100	96.947	ENSCVAG00000010395	srp54	52	96.947	Cyprinodon_variegatus
ENSUAMG00000012385	SRP54	100	96.565	ENSDARG00000098367	srp54	52	96.565	Danio_rerio
ENSUAMG00000012385	SRP54	100	100.000	ENSDNOG00000032525	SRP54	52	100.000	Dasypus_novemcinctus
ENSUAMG00000012385	SRP54	100	87.786	ENSDORG00000005159	-	57	87.786	Dipodomys_ordii
ENSUAMG00000012385	SRP54	100	80.153	FBgn0010747	Srp54k	52	80.153	Drosophila_melanogaster
ENSUAMG00000012385	SRP54	100	98.092	ENSETEG00000016307	-	52	98.092	Echinops_telfairi
ENSUAMG00000012385	SRP54	100	88.550	ENSEBUG00000009437	-	52	88.550	Eptatretus_burgeri
ENSUAMG00000012385	SRP54	100	100.000	ENSEASG00005002057	SRP54	52	100.000	Equus_asinus_asinus
ENSUAMG00000012385	SRP54	100	100.000	ENSECAG00000018042	SRP54	52	100.000	Equus_caballus
ENSUAMG00000012385	SRP54	100	95.802	ENSELUG00000003395	srp54	52	95.802	Esox_lucius
ENSUAMG00000012385	SRP54	100	99.618	ENSFCAG00000032033	SRP54	52	99.618	Felis_catus
ENSUAMG00000012385	SRP54	100	98.855	ENSFALG00000005995	SRP54	52	98.855	Ficedula_albicollis
ENSUAMG00000012385	SRP54	100	100.000	ENSFDAG00000016767	SRP54	53	100.000	Fukomys_damarensis
ENSUAMG00000012385	SRP54	100	96.183	ENSFHEG00000004263	srp54	52	96.183	Fundulus_heteroclitus
ENSUAMG00000012385	SRP54	100	98.855	ENSGALG00000023135	SRP54	52	98.855	Gallus_gallus
ENSUAMG00000012385	SRP54	100	96.947	ENSGAFG00000011586	srp54	52	96.947	Gambusia_affinis
ENSUAMG00000012385	SRP54	100	96.565	ENSGACG00000004181	srp54	60	96.565	Gasterosteus_aculeatus
ENSUAMG00000012385	SRP54	100	99.237	ENSGAGG00000014766	SRP54	52	99.237	Gopherus_agassizii
ENSUAMG00000012385	SRP54	100	100.000	ENSGGOG00000002926	SRP54	87	91.304	Gorilla_gorilla
ENSUAMG00000012385	SRP54	100	96.947	ENSHBUG00000005678	srp54	52	96.947	Haplochromis_burtoni
ENSUAMG00000012385	SRP54	100	100.000	ENSHGLG00000002850	SRP54	52	100.000	Heterocephalus_glaber_female
ENSUAMG00000012385	SRP54	100	100.000	ENSHGLG00100005263	SRP54	52	100.000	Heterocephalus_glaber_male
ENSUAMG00000012385	SRP54	100	65.399	ENSHGLG00100007281	-	51	65.399	Heterocephalus_glaber_male
ENSUAMG00000012385	SRP54	100	94.656	ENSHCOG00000021127	srp54	52	94.656	Hippocampus_comes
ENSUAMG00000012385	SRP54	100	95.802	ENSIPUG00000001420	srp54	52	95.802	Ictalurus_punctatus
ENSUAMG00000012385	SRP54	100	100.000	ENSSTOG00000016023	SRP54	52	100.000	Ictidomys_tridecemlineatus
ENSUAMG00000012385	SRP54	100	99.618	ENSJJAG00000013417	-	55	99.618	Jaculus_jaculus
ENSUAMG00000012385	SRP54	100	95.802	ENSKMAG00000007707	srp54	52	95.802	Kryptolebias_marmoratus
ENSUAMG00000012385	SRP54	100	96.565	ENSLBEG00000018690	srp54	52	96.565	Labrus_bergylta
ENSUAMG00000012385	SRP54	100	96.565	ENSLBEG00000021122	srp54	52	96.565	Labrus_bergylta
ENSUAMG00000012385	SRP54	100	96.565	ENSLACG00000017890	SRP54	52	96.565	Latimeria_chalumnae
ENSUAMG00000012385	SRP54	100	98.092	ENSLOCG00000009440	srp54	52	98.092	Lepisosteus_oculatus
ENSUAMG00000012385	SRP54	100	100.000	ENSLAFG00000012007	SRP54	52	100.000	Loxodonta_africana
ENSUAMG00000012385	SRP54	100	100.000	ENSMFAG00000044371	SRP54	87	91.304	Macaca_fascicularis
ENSUAMG00000012385	SRP54	100	100.000	ENSMMUG00000015073	FAM177A1	87	91.304	Macaca_mulatta
ENSUAMG00000012385	SRP54	100	100.000	ENSMNEG00000006947	SRP54	87	91.304	Macaca_nemestrina
ENSUAMG00000012385	SRP54	100	100.000	ENSMLEG00000042251	SRP54	87	91.304	Mandrillus_leucophaeus
ENSUAMG00000012385	SRP54	100	96.947	ENSMAMG00000004803	srp54	52	96.947	Mastacembelus_armatus
ENSUAMG00000012385	SRP54	100	96.947	ENSMZEG00005027528	srp54	52	96.947	Maylandia_zebra
ENSUAMG00000012385	SRP54	100	89.773	ENSMGAG00000012481	SRP54	52	89.773	Meleagris_gallopavo
ENSUAMG00000012385	SRP54	100	99.618	ENSMAUG00000014447	-	52	99.618	Mesocricetus_auratus
ENSUAMG00000012385	SRP54	100	100.000	ENSMICG00000010270	SRP54	52	100.000	Microcebus_murinus
ENSUAMG00000012385	SRP54	100	94.656	ENSMMOG00000020303	srp54	57	94.656	Mola_mola
ENSUAMG00000012385	SRP54	100	99.618	ENSMODG00000023150	-	52	99.618	Monodelphis_domestica
ENSUAMG00000012385	SRP54	100	99.618	ENSMODG00000012925	-	52	99.618	Monodelphis_domestica
ENSUAMG00000012385	SRP54	100	96.183	ENSMALG00000009163	srp54	58	96.183	Monopterus_albus
ENSUAMG00000012385	SRP54	100	99.618	MGP_CAROLIEiJ_G0017754	-	52	99.618	Mus_caroli
ENSUAMG00000012385	SRP54	100	99.618	ENSMUSG00000079108	Srp54c	52	99.618	Mus_musculus
ENSUAMG00000012385	SRP54	100	99.618	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSUAMG00000012385	SRP54	100	99.618	ENSMUSG00000112449	Srp54b	98	91.011	Mus_musculus
ENSUAMG00000012385	SRP54	100	99.618	MGP_PahariEiJ_G0029510	-	52	99.618	Mus_pahari
ENSUAMG00000012385	SRP54	100	100.000	ENSMPUG00000016302	SRP54	52	100.000	Mustela_putorius_furo
ENSUAMG00000012385	SRP54	100	100.000	ENSMLUG00000008958	SRP54	52	100.000	Myotis_lucifugus
ENSUAMG00000012385	SRP54	100	100.000	ENSNLEG00000003496	SRP54	87	91.304	Nomascus_leucogenys
ENSUAMG00000012385	SRP54	100	100.000	ENSODEG00000004865	SRP54	53	100.000	Octodon_degus
ENSUAMG00000012385	SRP54	100	96.947	ENSONIG00000011768	srp54	52	96.947	Oreochromis_niloticus
ENSUAMG00000012385	SRP54	100	100.000	ENSOANG00000014051	SRP54	52	100.000	Ornithorhynchus_anatinus
ENSUAMG00000012385	SRP54	100	100.000	ENSOCUG00000007838	SRP54	52	100.000	Oryctolagus_cuniculus
ENSUAMG00000012385	SRP54	100	96.565	ENSORLG00000010027	srp54	52	96.565	Oryzias_latipes
ENSUAMG00000012385	SRP54	100	96.565	ENSORLG00020001878	srp54	52	96.565	Oryzias_latipes_hni
ENSUAMG00000012385	SRP54	100	96.565	ENSORLG00015021866	srp54	52	96.565	Oryzias_latipes_hsok
ENSUAMG00000012385	SRP54	100	96.183	ENSOMEG00000020952	srp54	52	96.183	Oryzias_melastigma
ENSUAMG00000012385	SRP54	100	100.000	ENSOGAG00000012188	SRP54	52	100.000	Otolemur_garnettii
ENSUAMG00000012385	SRP54	100	100.000	ENSOARG00000007160	SRP54	52	100.000	Ovis_aries
ENSUAMG00000012385	SRP54	100	100.000	ENSPPAG00000017434	SRP54	87	91.304	Pan_paniscus
ENSUAMG00000012385	SRP54	100	97.710	ENSPPRG00000014047	SRP54	77	100.000	Panthera_pardus
ENSUAMG00000012385	SRP54	100	99.618	ENSPTIG00000000744	SRP54	50	99.618	Panthera_tigris_altaica
ENSUAMG00000012385	SRP54	100	100.000	ENSPTRG00000006259	FAM177A1	87	91.304	Pan_troglodytes
ENSUAMG00000012385	SRP54	100	100.000	ENSPANG00000023853	SRP54	87	91.304	Papio_anubis
ENSUAMG00000012385	SRP54	100	96.183	ENSPKIG00000001953	srp54	52	96.183	Paramormyrops_kingsleyae
ENSUAMG00000012385	SRP54	100	99.237	ENSPSIG00000006476	SRP54	52	99.237	Pelodiscus_sinensis
ENSUAMG00000012385	SRP54	100	96.565	ENSPMGG00000004127	srp54	57	96.565	Periophthalmus_magnuspinnatus
ENSUAMG00000012385	SRP54	100	99.237	ENSPEMG00000019634	-	64	99.237	Peromyscus_maniculatus_bairdii
ENSUAMG00000012385	SRP54	100	89.695	ENSPMAG00000006078	-	52	89.695	Petromyzon_marinus
ENSUAMG00000012385	SRP54	100	99.618	ENSPCIG00000016175	SRP54	52	99.618	Phascolarctos_cinereus
ENSUAMG00000012385	SRP54	100	96.947	ENSPFOG00000008870	srp54	52	96.947	Poecilia_formosa
ENSUAMG00000012385	SRP54	100	96.947	ENSPLAG00000009889	srp54	52	96.947	Poecilia_latipinna
ENSUAMG00000012385	SRP54	100	96.947	ENSPMEG00000008601	srp54	52	96.947	Poecilia_mexicana
ENSUAMG00000012385	SRP54	100	96.947	ENSPREG00000004505	srp54	52	96.947	Poecilia_reticulata
ENSUAMG00000012385	SRP54	100	90.076	ENSPPYG00000005739	SRP54	52	90.076	Pongo_abelii
ENSUAMG00000012385	SRP54	100	91.985	ENSPCAG00000006268	SRP54	52	91.985	Procavia_capensis
ENSUAMG00000012385	SRP54	100	96.198	ENSPCOG00000022473	SRP54	52	96.198	Propithecus_coquereli
ENSUAMG00000012385	SRP54	74	100.000	ENSPVAG00000010056	SRP54	50	100.000	Pteropus_vampyrus
ENSUAMG00000012385	SRP54	100	96.947	ENSPNYG00000009717	srp54	52	96.947	Pundamilia_nyererei
ENSUAMG00000012385	SRP54	100	96.565	ENSPNAG00000008544	srp54	52	96.565	Pygocentrus_nattereri
ENSUAMG00000012385	SRP54	100	99.237	ENSRNOG00000032776	Srp54a	52	99.237	Rattus_norvegicus
ENSUAMG00000012385	SRP54	100	100.000	ENSRROG00000041292	SRP54	87	91.304	Rhinopithecus_roxellana
ENSUAMG00000012385	SRP54	100	57.037	YPR088C	SRP54	50	57.037	Saccharomyces_cerevisiae
ENSUAMG00000012385	SRP54	100	96.183	ENSSFOG00015013920	srp54	52	96.183	Scleropages_formosus
ENSUAMG00000012385	SRP54	100	96.565	ENSSDUG00000018586	srp54	52	96.565	Seriola_dumerili
ENSUAMG00000012385	SRP54	100	96.183	ENSSLDG00000010476	srp54	52	96.183	Seriola_lalandi_dorsalis
ENSUAMG00000012385	SRP54	100	100.000	ENSSARG00000002744	SRP54	52	100.000	Sorex_araneus
ENSUAMG00000012385	SRP54	100	99.237	ENSSPUG00000013101	SRP54	52	99.237	Sphenodon_punctatus
ENSUAMG00000012385	SRP54	100	96.565	ENSSPAG00000002354	srp54	52	96.565	Stegastes_partitus
ENSUAMG00000012385	SRP54	100	100.000	ENSSSCG00000001955	SRP54	52	100.000	Sus_scrofa
ENSUAMG00000012385	SRP54	100	98.855	ENSTGUG00000011945	-	52	98.855	Taeniopygia_guttata
ENSUAMG00000012385	SRP54	100	95.802	ENSTRUG00000007057	srp54	52	95.802	Takifugu_rubripes
ENSUAMG00000012385	SRP54	100	95.802	ENSTNIG00000002589	srp54	52	95.802	Tetraodon_nigroviridis
ENSUAMG00000012385	SRP54	100	80.534	ENSTTRG00000000928	SRP54	52	80.534	Tursiops_truncatus
ENSUAMG00000012385	SRP54	100	100.000	ENSUMAG00000011234	SRP54	52	100.000	Ursus_maritimus
ENSUAMG00000012385	SRP54	100	100.000	ENSVPAG00000005668	SRP54	55	100.000	Vicugna_pacos
ENSUAMG00000012385	SRP54	100	100.000	ENSVVUG00000019962	SRP54	52	100.000	Vulpes_vulpes
ENSUAMG00000012385	SRP54	100	96.947	ENSXCOG00000004658	srp54	57	96.947	Xiphophorus_couchianus
ENSUAMG00000012385	SRP54	100	96.947	ENSXMAG00000018315	srp54	52	96.947	Xiphophorus_maculatus