EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSUAMG00000012454 (Gene tree)
Gene ID
-
Gene Symbol
LSG1
Alias
FLJ11301
Full Name
large 60S subunit nuclear export GTPase 1
Gene Type
protein_coding
Species
Ursus_americanus
Status
putative
Strand
Minus strand
Length
31033 bases
Position
chrLZNR01000021.1:428914-459946
Accession
25652
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSUAMP00000015570MMR_HSR1PF01926.234.3e-1411
ENSUAMP00000015567MMR_HSR1PF01926.234.8e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSUAMT00000017448LSG1-2012885-ENSUAMP00000015567659 (aa)-UPI0004E02263
ENSUAMT00000017451LSG1-2022952-ENSUAMP00000015570615 (aa)--
Gene Model
Click here to download ENSUAMG00000012454's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000012454's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSUAMG00000012454LSG15039.888ENSUAMG00000007671GNL15039.888
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSUAMG00000012454LSG19983.587ENSG00000041802LSG19888.506Homo_sapiens
ENSUAMG00000012454LSG110064.653ENSAPOG00000009694lsg110064.350Acanthochromis_polyacanthus
ENSUAMG00000012454LSG110096.970ENSAMEG00000009343LSG110096.970Ailuropoda_melanoleuca
ENSUAMG00000012454LSG19863.932ENSACIG00000012406lsg110063.278Amphilophus_citrinellus
ENSUAMG00000012454LSG110062.840ENSAOCG00000016066lsg110063.801Amphiprion_ocellaris
ENSUAMG00000012454LSG110063.897ENSAPEG00000003252lsg110063.952Amphiprion_percula
ENSUAMG00000012454LSG19863.622ENSATEG00000011794lsg110063.348Anabas_testudineus
ENSUAMG00000012454LSG19565.665ENSACAG00000004222LSG19964.557Anolis_carolinensis
ENSUAMG00000012454LSG19984.498ENSANAG00000021153LSG19984.498Aotus_nancymaae
ENSUAMG00000012454LSG110062.669ENSACLG00000000520lsg110062.727Astatotilapia_calliptera
ENSUAMG00000012454LSG110062.315ENSAMXG00000008271lsg110062.048Astyanax_mexicanus
ENSUAMG00000012454LSG19983.587ENSBTAG00000008461LSG19983.587Bos_taurus
ENSUAMG00000012454LSG18050.249WBGene00016907C53H9.29555.224Caenorhabditis_elegans
ENSUAMG00000012454LSG19984.043ENSCJAG00000013962LSG19984.043Callithrix_jacchus
ENSUAMG00000012454LSG19589.457ENSCAFG00000013445LSG110089.457Canis_familiaris
ENSUAMG00000012454LSG110088.369ENSCAFG00020002216LSG110088.369Canis_lupus_dingo
ENSUAMG00000012454LSG110083.308ENSCHIG00000015769LSG110083.308Capra_hircus
ENSUAMG00000012454LSG19983.891ENSTSYG00000001447LSG19983.891Carlito_syrichta
ENSUAMG00000012454LSG19576.752ENSCAPG00000009856LSG19976.000Cavia_aperea
ENSUAMG00000012454LSG19982.979ENSCCAG00000035744LSG19982.979Cebus_capucinus
ENSUAMG00000012454LSG19984.043ENSCATG00000042060LSG19982.675Cercocebus_atys
ENSUAMG00000012454LSG19984.195ENSCSAG00000008796LSG19284.195Chlorocebus_sabaeus
ENSUAMG00000012454LSG110069.382ENSCPBG00000015941LSG18369.080Chrysemys_picta_bellii
ENSUAMG00000012454LSG17763.684ENSCING00000007079-9263.684Ciona_intestinalis
ENSUAMG00000012454LSG17261.929ENSCSAVG00000002514-9655.102Ciona_savignyi
ENSUAMG00000012454LSG19983.739ENSCANG00000030709LSG19983.739Colobus_angolensis_palliatus
ENSUAMG00000012454LSG19981.487ENSCGRG00001019846Lsg19981.487Cricetulus_griseus_chok1gshd
ENSUAMG00000012454LSG19981.487ENSCGRG00000014617Lsg19981.487Cricetulus_griseus_crigri
ENSUAMG00000012454LSG19863.287ENSCSEG00000008522lsg110062.801Cynoglossus_semilaevis
ENSUAMG00000012454LSG19865.062ENSCVAG00000002484lsg110064.795Cyprinodon_variegatus
ENSUAMG00000012454LSG110065.606ENSDARG00000015352lsg110065.606Danio_rerio
ENSUAMG00000012454LSG19982.602ENSDNOG00000006224LSG19982.300Dasypus_novemcinctus
ENSUAMG00000012454LSG18258.607FBgn0266284Ns38958.607Drosophila_melanogaster
ENSUAMG00000012454LSG18885.333ENSETEG00000003888LSG18985.333Echinops_telfairi
ENSUAMG00000012454LSG18957.167ENSEBUG00000003119lsg18557.333Eptatretus_burgeri
ENSUAMG00000012454LSG19985.106ENSEASG00005000678LSG19985.106Equus_asinus_asinus
ENSUAMG00000012454LSG19985.258ENSECAG00000017659LSG19985.258Equus_caballus
ENSUAMG00000012454LSG18780.342ENSEEUG00000015217LSG18780.342Erinaceus_europaeus
ENSUAMG00000012454LSG110060.332ENSELUG00000023973lsg110060.332Esox_lucius
ENSUAMG00000012454LSG110090.288ENSFCAG00000024957LSG110090.288Felis_catus
ENSUAMG00000012454LSG19366.829ENSFALG00000007210LSG19465.961Ficedula_albicollis
ENSUAMG00000012454LSG19978.163ENSFDAG00000017373LSG19978.030Fukomys_damarensis
ENSUAMG00000012454LSG19763.256ENSFHEG00000003680lsg19962.090Fundulus_heteroclitus
ENSUAMG00000012454LSG18272.269ENSGMOG00000015834lsg18871.032Gadus_morhua
ENSUAMG00000012454LSG19964.060ENSGALG00000007058LSG18762.874Gallus_gallus
ENSUAMG00000012454LSG19764.486ENSGAFG00000015831lsg19963.982Gambusia_affinis
ENSUAMG00000012454LSG19861.280ENSGACG00000009323lsg110060.448Gasterosteus_aculeatus
ENSUAMG00000012454LSG19984.043ENSGGOG00000000520LSG19984.043Gorilla_gorilla
ENSUAMG00000012454LSG110063.158ENSHBUG00000005659lsg110062.879Haplochromis_burtoni
ENSUAMG00000012454LSG19975.452ENSHGLG00000017390LSG19976.205Heterocephalus_glaber_female
ENSUAMG00000012454LSG19975.452ENSHGLG00100018587LSG19976.205Heterocephalus_glaber_male
ENSUAMG00000012454LSG19862.906ENSHCOG00000016848lsg110061.654Hippocampus_comes
ENSUAMG00000012454LSG110063.540ENSIPUG00000008631lsg110064.145Ictalurus_punctatus
ENSUAMG00000012454LSG18176.846ENSSTOG00000010234LSG19978.643Ictidomys_tridecemlineatus
ENSUAMG00000012454LSG19980.000ENSJJAG00000015513Lsg19979.697Jaculus_jaculus
ENSUAMG00000012454LSG19862.597ENSKMAG00000009681lsg110061.991Kryptolebias_marmoratus
ENSUAMG00000012454LSG19862.384ENSLBEG00000024261lsg110061.631Labrus_bergylta
ENSUAMG00000012454LSG110064.962ENSLACG00000013399LSG110064.458Latimeria_chalumnae
ENSUAMG00000012454LSG19865.443ENSLOCG00000004918lsg110064.962Lepisosteus_oculatus
ENSUAMG00000012454LSG19982.219ENSLAFG00000012919-9982.219Loxodonta_africana
ENSUAMG00000012454LSG19984.347ENSMFAG00000039903LSG19982.979Macaca_fascicularis
ENSUAMG00000012454LSG19984.347ENSMMUG00000010708LSG19984.347Macaca_mulatta
ENSUAMG00000012454LSG19984.043ENSMNEG00000031538LSG19982.523Macaca_nemestrina
ENSUAMG00000012454LSG19984.347ENSMLEG00000041184LSG19984.347Mandrillus_leucophaeus
ENSUAMG00000012454LSG110062.763ENSMAMG00000000470lsg110062.613Mastacembelus_armatus
ENSUAMG00000012454LSG110063.308ENSMZEG00005017865lsg110063.030Maylandia_zebra
ENSUAMG00000012454LSG18964.298ENSMGAG00000007050LSG19964.636Meleagris_gallopavo
ENSUAMG00000012454LSG19979.016ENSMAUG00000016976Lsg19479.672Mesocricetus_auratus
ENSUAMG00000012454LSG19982.523ENSMICG00000049087LSG19982.523Microcebus_murinus
ENSUAMG00000012454LSG19979.425ENSMOCG00000022136Lsg19979.909Microtus_ochrogaster
ENSUAMG00000012454LSG18272.093ENSMMOG00000008884lsg19871.146Mola_mola
ENSUAMG00000012454LSG19957.988ENSMODG00000019828LSG19957.164Monodelphis_domestica
ENSUAMG00000012454LSG110079.211MGP_CAROLIEiJ_G0020648Lsg110079.211Mus_caroli
ENSUAMG00000012454LSG110080.121ENSMUSG00000022538Lsg110080.121Mus_musculus
ENSUAMG00000012454LSG19880.586MGP_PahariEiJ_G0016352Lsg110080.606Mus_pahari
ENSUAMG00000012454LSG110079.818MGP_SPRETEiJ_G0021544Lsg110079.818Mus_spretus
ENSUAMG00000012454LSG110091.351ENSMPUG00000003734LSG110091.351Mustela_putorius_furo
ENSUAMG00000012454LSG110085.303ENSMLUG00000012548LSG110085.303Myotis_lucifugus
ENSUAMG00000012454LSG19980.395ENSNGAG00000021872Lsg19979.939Nannospalax_galili
ENSUAMG00000012454LSG19984.347ENSNLEG00000008293LSG19984.347Nomascus_leucogenys
ENSUAMG00000012454LSG16970.103ENSMEUG00000009041-8270.103Notamacropus_eugenii
ENSUAMG00000012454LSG110062.985ENSONIG00000002635lsg110063.134Oreochromis_niloticus
ENSUAMG00000012454LSG19571.178ENSOANG00000012742LSG19970.064Ornithorhynchus_anatinus
ENSUAMG00000012454LSG19982.827ENSOCUG00000004817LSG19982.827Oryctolagus_cuniculus
ENSUAMG00000012454LSG19862.751ENSORLG00000007695lsg110062.671Oryzias_latipes
ENSUAMG00000012454LSG19862.539ENSORLG00020016286lsg110062.085Oryzias_latipes_hni
ENSUAMG00000012454LSG19862.539ENSORLG00015012025lsg110061.912Oryzias_latipes_hsok
ENSUAMG00000012454LSG19861.669ENSOMEG00000022379lsg110061.212Oryzias_melastigma
ENSUAMG00000012454LSG19984.290ENSOGAG00000003475LSG19984.290Otolemur_garnettii
ENSUAMG00000012454LSG110083.333ENSOARG00000020403LSG110083.333Ovis_aries
ENSUAMG00000012454LSG19984.043ENSPPAG00000029271LSG19984.043Pan_paniscus
ENSUAMG00000012454LSG110089.339ENSPPRG00000010281LSG110089.339Panthera_pardus
ENSUAMG00000012454LSG110090.137ENSPTIG00000010789LSG110090.137Panthera_tigris_altaica
ENSUAMG00000012454LSG19983.891ENSPTRG00000015760LSG19983.891Pan_troglodytes
ENSUAMG00000012454LSG19984.195ENSPANG00000018249LSG19982.827Papio_anubis
ENSUAMG00000012454LSG19763.777ENSPKIG00000002895lsg19963.363Paramormyrops_kingsleyae
ENSUAMG00000012454LSG19665.533ENSPSIG00000009821LSG110064.915Pelodiscus_sinensis
ENSUAMG00000012454LSG19563.391ENSPMGG00000000931lsg110063.333Periophthalmus_magnuspinnatus
ENSUAMG00000012454LSG19980.787ENSPEMG00000012082-9979.279Peromyscus_maniculatus_bairdii
ENSUAMG00000012454LSG19958.457ENSPMAG00000007451lsg19958.780Petromyzon_marinus
ENSUAMG00000012454LSG110064.767ENSPCIG00000013890LSG18264.767Phascolarctos_cinereus
ENSUAMG00000012454LSG19765.630ENSPFOG00000021882lsg19964.318Poecilia_formosa
ENSUAMG00000012454LSG19764.852ENSPLAG00000019536lsg19963.473Poecilia_latipinna
ENSUAMG00000012454LSG19764.806ENSPMEG00000017281lsg19963.528Poecilia_mexicana
ENSUAMG00000012454LSG19754.809ENSPREG00000006048lsg19953.676Poecilia_reticulata
ENSUAMG00000012454LSG19983.526ENSPPYG00000014425LSG110082.566Pongo_abelii
ENSUAMG00000012454LSG19084.000ENSPCAG00000005511LSG19084.000Procavia_capensis
ENSUAMG00000012454LSG19983.891ENSPCOG00000012360LSG19983.891Propithecus_coquereli
ENSUAMG00000012454LSG110062.519ENSPNYG00000021994lsg110062.576Pundamilia_nyererei
ENSUAMG00000012454LSG110064.103ENSPNAG00000015533lsg110063.897Pygocentrus_nattereri
ENSUAMG00000012454LSG110079.638ENSRNOG00000001727Lsg110079.789Rattus_norvegicus
ENSUAMG00000012454LSG19982.827ENSRBIG00000029053LSG19982.827Rhinopithecus_bieti
ENSUAMG00000012454LSG19982.827ENSRROG00000037702LSG19982.827Rhinopithecus_roxellana
ENSUAMG00000012454LSG17057.485YGL099WLSG16557.485Saccharomyces_cerevisiae
ENSUAMG00000012454LSG19984.498ENSSBOG00000034938LSG19984.498Saimiri_boliviensis_boliviensis
ENSUAMG00000012454LSG17864.474ENSSHAG00000003487LSG110063.757Sarcophilus_harrisii
ENSUAMG00000012454LSG19863.664ENSSFOG00015008955lsg110062.930Scleropages_formosus
ENSUAMG00000012454LSG19864.067ENSSDUG00000004622lsg110063.348Seriola_dumerili
ENSUAMG00000012454LSG19863.538ENSSLDG00000010869lsg110063.126Seriola_lalandi_dorsalis
ENSUAMG00000012454LSG18182.456ENSSARG00000012981LSG18182.456Sorex_araneus
ENSUAMG00000012454LSG110067.905ENSSPUG00000016347LSG110075.806Sphenodon_punctatus
ENSUAMG00000012454LSG110058.069ENSSPAG00000005508lsg110062.085Stegastes_partitus
ENSUAMG00000012454LSG110083.005ENSSSCG00000011827LSG110083.005Sus_scrofa
ENSUAMG00000012454LSG18964.500ENSTGUG00000009068LSG110064.500Taeniopygia_guttata
ENSUAMG00000012454LSG19860.648ENSTRUG00000017380lsg110060.241Takifugu_rubripes
ENSUAMG00000012454LSG19863.945ENSTNIG00000015570lsg110063.609Tetraodon_nigroviridis
ENSUAMG00000012454LSG110076.061ENSTTRG00000000559LSG110076.061Tursiops_truncatus
ENSUAMG00000012454LSG1100100.000ENSUMAG00000000855LSG1100100.000Ursus_maritimus
ENSUAMG00000012454LSG19580.032ENSVPAG00000012400LSG110080.032Vicugna_pacos
ENSUAMG00000012454LSG19588.658ENSVVUG00000008956LSG19788.658Vulpes_vulpes
ENSUAMG00000012454LSG19965.269ENSXETG00000003451lsg110064.201Xenopus_tropicalis
ENSUAMG00000012454LSG19763.957ENSXCOG00000003239lsg19963.323Xiphophorus_couchianus
ENSUAMG00000012454LSG19763.540ENSXMAG00000005536lsg19963.196Xiphophorus_maculatus

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