EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000012474 (Gene tree)
Gene ID: -
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 16039 bases
Position: chrLZNR01013093.1:8866-24904
Accession: 17631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000015622	RNA_pol_I_A49	PF06870.12	1.1e-111	1	1
ENSUAMP00000015625	RNA_pol_I_A49	PF06870.12	9e-107	1	1
ENSUAMP00000015634	RNA_pol_I_A49	PF06870.12	4.7e-102	1	1
ENSUAMP00000015644	RNA_pol_I_A49	PF06870.12	5.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000017513	POLR1E-202	1260	-	ENSUAMP00000015625	419 (aa)	-	-
ENSUAMT00000017523	POLR1E-203	1516	-	ENSUAMP00000015634	367 (aa)	-	-
ENSUAMT00000017510	POLR1E-201	1260	-	ENSUAMP00000015622	419 (aa)	-	UPI0004DFD718
ENSUAMT00000017535	POLR1E-204	420	-	ENSUAMP00000015644	139 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000012474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000012474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000012474	POLR1E	100	89.101	ENSG00000137054	POLR1E	100	87.589	Homo_sapiens
ENSUAMG00000012474	POLR1E	98	45.455	ENSAPOG00000012452	polr1e	99	43.750	Acanthochromis_polyacanthus
ENSUAMG00000012474	POLR1E	100	88.387	ENSAMEG00000010193	POLR1E	97	88.387	Ailuropoda_melanoleuca
ENSUAMG00000012474	POLR1E	92	46.628	ENSACIG00000009884	polr1e	99	44.697	Amphilophus_citrinellus
ENSUAMG00000012474	POLR1E	98	48.753	ENSAOCG00000005665	polr1e	99	46.618	Amphiprion_ocellaris
ENSUAMG00000012474	POLR1E	98	49.036	ENSAPEG00000020581	polr1e	99	46.875	Amphiprion_percula
ENSUAMG00000012474	POLR1E	98	48.753	ENSATEG00000020609	polr1e	99	46.618	Anabas_testudineus
ENSUAMG00000012474	POLR1E	80	56.316	ENSAPLG00000010340	POLR1E	99	56.316	Anas_platyrhynchos
ENSUAMG00000012474	POLR1E	100	88.011	ENSANAG00000038046	POLR1E	100	86.635	Aotus_nancymaae
ENSUAMG00000012474	POLR1E	100	46.757	ENSACLG00000013685	polr1e	99	44.444	Astatotilapia_calliptera
ENSUAMG00000012474	POLR1E	97	44.598	ENSAMXG00000018181	polr1e	95	45.000	Astyanax_mexicanus
ENSUAMG00000012474	POLR1E	100	90.463	ENSBTAG00000012243	POLR1E	100	89.260	Bos_taurus
ENSUAMG00000012474	POLR1E	100	86.649	ENSCJAG00000010512	POLR1E	93	86.631	Callithrix_jacchus
ENSUAMG00000012474	POLR1E	100	94.278	ENSCAFG00000002377	POLR1E	100	93.317	Canis_familiaris
ENSUAMG00000012474	POLR1E	100	94.550	ENSCAFG00020017851	POLR1E	100	93.556	Canis_lupus_dingo
ENSUAMG00000012474	POLR1E	100	89.373	ENSCHIG00000019479	POLR1E	100	87.828	Capra_hircus
ENSUAMG00000012474	POLR1E	100	88.283	ENSTSYG00000002075	POLR1E	100	87.589	Carlito_syrichta
ENSUAMG00000012474	POLR1E	68	86.268	ENSCAPG00000015653	POLR1E	99	85.714	Cavia_aperea
ENSUAMG00000012474	POLR1E	100	88.283	ENSCPOG00000009965	POLR1E	100	86.842	Cavia_porcellus
ENSUAMG00000012474	POLR1E	100	79.837	ENSCCAG00000029460	POLR1E	100	79.475	Cebus_capucinus
ENSUAMG00000012474	POLR1E	100	88.828	ENSCATG00000031732	POLR1E	100	91.228	Cercocebus_atys
ENSUAMG00000012474	POLR1E	99	89.617	ENSCLAG00000012701	POLR1E	96	89.617	Chinchilla_lanigera
ENSUAMG00000012474	POLR1E	100	88.283	ENSCSAG00000010782	POLR1E	100	86.874	Chlorocebus_sabaeus
ENSUAMG00000012474	POLR1E	94	78.680	ENSCHOG00000013024	POLR1E	83	78.680	Choloepus_hoffmanni
ENSUAMG00000012474	POLR1E	98	68.333	ENSCPBG00000006923	POLR1E	99	67.397	Chrysemys_picta_bellii
ENSUAMG00000012474	POLR1E	100	88.283	ENSCANG00000036112	POLR1E	100	90.435	Colobus_angolensis_palliatus
ENSUAMG00000012474	POLR1E	100	83.379	ENSCGRG00001006197	Polr1e	96	82.297	Cricetulus_griseus_chok1gshd
ENSUAMG00000012474	POLR1E	100	82.834	ENSCGRG00000006430	Polr1e	96	81.818	Cricetulus_griseus_crigri
ENSUAMG00000012474	POLR1E	93	46.199	ENSCSEG00000005121	polr1e	96	44.557	Cynoglossus_semilaevis
ENSUAMG00000012474	POLR1E	98	44.011	ENSCVAG00000019759	polr1e	99	42.271	Cyprinodon_variegatus
ENSUAMG00000012474	POLR1E	97	47.075	ENSDARG00000006434	polr1e	98	45.301	Danio_rerio
ENSUAMG00000012474	POLR1E	100	79.060	ENSDNOG00000010257	POLR1E	99	79.060	Dasypus_novemcinctus
ENSUAMG00000012474	POLR1E	83	87.826	ENSDORG00000026463	-	94	83.607	Dipodomys_ordii
ENSUAMG00000012474	POLR1E	83	83.660	ENSETEG00000018204	POLR1E	99	81.285	Echinops_telfairi
ENSUAMG00000012474	POLR1E	61	38.806	ENSEBUG00000010635	-	96	30.499	Eptatretus_burgeri
ENSUAMG00000012474	POLR1E	100	92.916	ENSEASG00005000675	POLR1E	100	91.885	Equus_asinus_asinus
ENSUAMG00000012474	POLR1E	100	93.188	ENSECAG00000014669	POLR1E	100	92.124	Equus_caballus
ENSUAMG00000012474	POLR1E	94	74.873	ENSEEUG00000011928	POLR1E	87	73.284	Erinaceus_europaeus
ENSUAMG00000012474	POLR1E	96	48.451	ENSELUG00000008150	polr1e	97	45.833	Esox_lucius
ENSUAMG00000012474	POLR1E	100	92.916	ENSFCAG00000013081	POLR1E	100	91.885	Felis_catus
ENSUAMG00000012474	POLR1E	93	64.620	ENSFALG00000012950	POLR1E	99	62.341	Ficedula_albicollis
ENSUAMG00000012474	POLR1E	100	86.921	ENSFDAG00000016917	POLR1E	100	85.407	Fukomys_damarensis
ENSUAMG00000012474	POLR1E	98	46.518	ENSFHEG00000009801	polr1e	99	44.444	Fundulus_heteroclitus
ENSUAMG00000012474	POLR1E	96	39.944	ENSGMOG00000003336	POLR1E	93	40.100	Gadus_morhua
ENSUAMG00000012474	POLR1E	99	63.812	ENSGALG00000005395	POLR1E	99	61.501	Gallus_gallus
ENSUAMG00000012474	POLR1E	98	46.518	ENSGAFG00000004850	polr1e	99	44.444	Gambusia_affinis
ENSUAMG00000012474	POLR1E	98	43.869	ENSGACG00000016087	polr1e	99	42.143	Gasterosteus_aculeatus
ENSUAMG00000012474	POLR1E	97	61.281	ENSGAGG00000001659	POLR1E	98	60.145	Gopherus_agassizii
ENSUAMG00000012474	POLR1E	100	88.828	ENSGGOG00000001882	POLR1E	100	90.351	Gorilla_gorilla
ENSUAMG00000012474	POLR1E	100	47.027	ENSHBUG00000002559	polr1e	99	44.681	Haplochromis_burtoni
ENSUAMG00000012474	POLR1E	100	88.556	ENSHGLG00000002036	POLR1E	100	87.081	Heterocephalus_glaber_female
ENSUAMG00000012474	POLR1E	100	88.828	ENSHGLG00100012784	POLR1E	100	87.321	Heterocephalus_glaber_male
ENSUAMG00000012474	POLR1E	96	46.761	ENSHCOG00000002774	polr1e	99	45.169	Hippocampus_comes
ENSUAMG00000012474	POLR1E	97	45.404	ENSIPUG00000003019	polr1e	95	45.592	Ictalurus_punctatus
ENSUAMG00000012474	POLR1E	100	88.828	ENSSTOG00000009810	POLR1E	100	87.589	Ictidomys_tridecemlineatus
ENSUAMG00000012474	POLR1E	99	85.753	ENSJJAG00000020731	Polr1e	96	83.933	Jaculus_jaculus
ENSUAMG00000012474	POLR1E	98	45.556	ENSKMAG00000000046	polr1e	99	43.133	Kryptolebias_marmoratus
ENSUAMG00000012474	POLR1E	100	47.411	ENSLBEG00000003104	polr1e	99	45.933	Labrus_bergylta
ENSUAMG00000012474	POLR1E	84	63.548	ENSLACG00000003416	POLR1E	99	61.496	Latimeria_chalumnae
ENSUAMG00000012474	POLR1E	99	51.771	ENSLOCG00000012859	polr1e	99	50.119	Lepisosteus_oculatus
ENSUAMG00000012474	POLR1E	100	90.191	ENSLAFG00000012831	POLR1E	99	88.783	Loxodonta_africana
ENSUAMG00000012474	POLR1E	100	89.101	ENSMFAG00000045465	POLR1E	100	91.228	Macaca_fascicularis
ENSUAMG00000012474	POLR1E	100	89.101	ENSMMUG00000017892	POLR1E	100	91.228	Macaca_mulatta
ENSUAMG00000012474	POLR1E	100	81.649	ENSMNEG00000040283	POLR1E	100	88.000	Macaca_nemestrina
ENSUAMG00000012474	POLR1E	100	89.101	ENSMLEG00000031135	POLR1E	100	91.228	Mandrillus_leucophaeus
ENSUAMG00000012474	POLR1E	100	45.924	ENSMAMG00000001260	polr1e	99	43.705	Mastacembelus_armatus
ENSUAMG00000012474	POLR1E	100	46.757	ENSMZEG00005021536	polr1e	99	44.444	Maylandia_zebra
ENSUAMG00000012474	POLR1E	100	82.834	ENSMAUG00000021044	Polr1e	97	81.384	Mesocricetus_auratus
ENSUAMG00000012474	POLR1E	100	91.553	ENSMICG00000003673	POLR1E	100	90.453	Microcebus_murinus
ENSUAMG00000012474	POLR1E	100	83.379	ENSMOCG00000012920	Polr1e	96	82.536	Microtus_ochrogaster
ENSUAMG00000012474	POLR1E	98	47.238	ENSMMOG00000007391	polr1e	99	44.819	Mola_mola
ENSUAMG00000012474	POLR1E	98	75.766	ENSMODG00000002884	POLR1E	99	74.752	Monodelphis_domestica
ENSUAMG00000012474	POLR1E	100	47.283	ENSMALG00000002665	polr1e	99	44.893	Monopterus_albus
ENSUAMG00000012474	POLR1E	99	79.121	MGP_CAROLIEiJ_G0025967	Polr1e	97	78.626	Mus_caroli
ENSUAMG00000012474	POLR1E	99	79.396	ENSMUSG00000028318	Polr1e	97	79.135	Mus_musculus
ENSUAMG00000012474	POLR1E	99	82.143	MGP_PahariEiJ_G0024114	Polr1e	97	81.679	Mus_pahari
ENSUAMG00000012474	POLR1E	99	79.396	MGP_SPRETEiJ_G0026930	Polr1e	97	78.626	Mus_spretus
ENSUAMG00000012474	POLR1E	100	84.861	ENSMPUG00000006040	POLR1E	99	84.861	Mustela_putorius_furo
ENSUAMG00000012474	POLR1E	100	90.191	ENSMLUG00000012688	POLR1E	97	89.260	Myotis_lucifugus
ENSUAMG00000012474	POLR1E	99	86.575	ENSNGAG00000002520	Polr1e	96	85.167	Nannospalax_galili
ENSUAMG00000012474	POLR1E	100	47.297	ENSNBRG00000016822	polr1e	99	44.917	Neolamprologus_brichardi
ENSUAMG00000012474	POLR1E	100	88.828	ENSNLEG00000003616	POLR1E	100	90.351	Nomascus_leucogenys
ENSUAMG00000012474	POLR1E	73	81.818	ENSMEUG00000015372	-	80	76.250	Notamacropus_eugenii
ENSUAMG00000012474	POLR1E	86	71.866	ENSOPRG00000014206	POLR1E	100	71.866	Ochotona_princeps
ENSUAMG00000012474	POLR1E	100	88.556	ENSODEG00000014565	POLR1E	97	86.603	Octodon_degus
ENSUAMG00000012474	POLR1E	100	47.568	ENSONIG00000008921	polr1e	99	45.154	Oreochromis_niloticus
ENSUAMG00000012474	POLR1E	76	67.925	ENSOANG00000021091	-	89	71.098	Ornithorhynchus_anatinus
ENSUAMG00000012474	POLR1E	100	86.649	ENSOCUG00000024773	POLR1E	100	84.248	Oryctolagus_cuniculus
ENSUAMG00000012474	POLR1E	98	46.814	ENSORLG00000005143	polr1e	99	45.169	Oryzias_latipes
ENSUAMG00000012474	POLR1E	91	46.567	ENSORLG00020007271	polr1e	99	44.845	Oryzias_latipes_hni
ENSUAMG00000012474	POLR1E	98	46.537	ENSORLG00015000137	polr1e	99	44.928	Oryzias_latipes_hsok
ENSUAMG00000012474	POLR1E	98	45.706	ENSOMEG00000013264	polr1e	97	43.720	Oryzias_melastigma
ENSUAMG00000012474	POLR1E	100	92.643	ENSOGAG00000012981	POLR1E	98	91.408	Otolemur_garnettii
ENSUAMG00000012474	POLR1E	100	89.646	ENSOARG00000011465	POLR1E	97	88.067	Ovis_aries
ENSUAMG00000012474	POLR1E	100	89.101	ENSPPAG00000034566	POLR1E	100	91.228	Pan_paniscus
ENSUAMG00000012474	POLR1E	100	92.916	ENSPPRG00000005649	POLR1E	100	91.647	Panthera_pardus
ENSUAMG00000012474	POLR1E	100	92.916	ENSPTIG00000009774	POLR1E	100	91.647	Panthera_tigris_altaica
ENSUAMG00000012474	POLR1E	100	89.101	ENSPTRG00000020944	POLR1E	100	91.228	Pan_troglodytes
ENSUAMG00000012474	POLR1E	100	89.101	ENSPANG00000025563	POLR1E	100	91.228	Papio_anubis
ENSUAMG00000012474	POLR1E	98	48.066	ENSPKIG00000003562	polr1e	99	47.608	Paramormyrops_kingsleyae
ENSUAMG00000012474	POLR1E	94	65.607	ENSPSIG00000003274	POLR1E	90	64.752	Pelodiscus_sinensis
ENSUAMG00000012474	POLR1E	94	45.977	ENSPMGG00000024169	polr1e	96	44.750	Periophthalmus_magnuspinnatus
ENSUAMG00000012474	POLR1E	100	66.429	ENSPEMG00000022300	-	96	66.429	Peromyscus_maniculatus_bairdii
ENSUAMG00000012474	POLR1E	100	82.561	ENSPEMG00000019151	-	97	80.907	Peromyscus_maniculatus_bairdii
ENSUAMG00000012474	POLR1E	98	75.487	ENSPCIG00000014798	POLR1E	99	74.690	Phascolarctos_cinereus
ENSUAMG00000012474	POLR1E	98	44.675	ENSPFOG00000019627	polr1e	98	42.922	Poecilia_formosa
ENSUAMG00000012474	POLR1E	98	47.354	ENSPLAG00000022679	polr1e	99	44.928	Poecilia_latipinna
ENSUAMG00000012474	POLR1E	83	46.906	ENSPMEG00000022123	polr1e	93	44.444	Poecilia_mexicana
ENSUAMG00000012474	POLR1E	98	46.240	ENSPREG00000009470	polr1e	99	44.203	Poecilia_reticulata
ENSUAMG00000012474	POLR1E	100	88.828	ENSPPYG00000019061	POLR1E	100	87.112	Pongo_abelii
ENSUAMG00000012474	POLR1E	73	70.066	ENSPCAG00000004891	POLR1E	100	70.066	Procavia_capensis
ENSUAMG00000012474	POLR1E	100	92.098	ENSPCOG00000027448	POLR1E	100	90.931	Propithecus_coquereli
ENSUAMG00000012474	POLR1E	94	92.132	ENSPVAG00000007940	POLR1E	83	92.132	Pteropus_vampyrus
ENSUAMG00000012474	POLR1E	100	47.027	ENSPNYG00000001032	polr1e	99	44.681	Pundamilia_nyererei
ENSUAMG00000012474	POLR1E	97	44.167	ENSPNAG00000006987	polr1e	99	42.336	Pygocentrus_nattereri
ENSUAMG00000012474	POLR1E	99	81.593	ENSRNOG00000012664	Polr1e	96	80.769	Rattus_norvegicus
ENSUAMG00000012474	POLR1E	99	83.855	ENSRBIG00000034214	POLR1E	100	86.877	Rhinopithecus_bieti
ENSUAMG00000012474	POLR1E	100	88.556	ENSRROG00000031986	POLR1E	100	91.228	Rhinopithecus_roxellana
ENSUAMG00000012474	POLR1E	100	87.193	ENSSBOG00000021415	POLR1E	100	86.158	Saimiri_boliviensis_boliviensis
ENSUAMG00000012474	POLR1E	84	74.675	ENSSHAG00000016084	POLR1E	100	72.500	Sarcophilus_harrisii
ENSUAMG00000012474	POLR1E	97	50.140	ENSSFOG00015002293	polr1e	99	48.418	Scleropages_formosus
ENSUAMG00000012474	POLR1E	96	50.986	ENSSMAG00000011672	polr1e	91	48.284	Scophthalmus_maximus
ENSUAMG00000012474	POLR1E	96	48.732	ENSSDUG00000022279	polr1e	97	46.324	Seriola_dumerili
ENSUAMG00000012474	POLR1E	96	48.169	ENSSLDG00000024918	polr1e	97	45.833	Seriola_lalandi_dorsalis
ENSUAMG00000012474	POLR1E	73	80.000	ENSSARG00000009810	-	67	80.000	Sorex_araneus
ENSUAMG00000012474	POLR1E	98	67.590	ENSSPUG00000009499	POLR1E	99	66.344	Sphenodon_punctatus
ENSUAMG00000012474	POLR1E	98	48.753	ENSSPAG00000021240	polr1e	99	46.618	Stegastes_partitus
ENSUAMG00000012474	POLR1E	100	91.008	ENSSSCG00000005347	POLR1E	100	90.215	Sus_scrofa
ENSUAMG00000012474	POLR1E	94	53.620	ENSTGUG00000007169	POLR1E	99	53.620	Taeniopygia_guttata
ENSUAMG00000012474	POLR1E	98	44.598	ENSTRUG00000020779	polr1e	99	44.094	Takifugu_rubripes
ENSUAMG00000012474	POLR1E	98	45.580	ENSTNIG00000017812	polr1e	99	44.337	Tetraodon_nigroviridis
ENSUAMG00000012474	POLR1E	100	84.487	ENSTBEG00000013786	POLR1E	88	84.487	Tupaia_belangeri
ENSUAMG00000012474	POLR1E	94	90.176	ENSTTRG00000008294	POLR1E	84	90.176	Tursiops_truncatus
ENSUAMG00000012474	POLR1E	100	100.000	ENSUMAG00000011496	POLR1E	100	100.000	Ursus_maritimus
ENSUAMG00000012474	POLR1E	93	85.044	ENSVPAG00000009048	POLR1E	81	85.044	Vicugna_pacos
ENSUAMG00000012474	POLR1E	100	94.278	ENSVVUG00000019954	POLR1E	100	93.317	Vulpes_vulpes
ENSUAMG00000012474	POLR1E	98	53.039	ENSXETG00000006533	polr1e	99	52.415	Xenopus_tropicalis
ENSUAMG00000012474	POLR1E	98	45.706	ENSXCOG00000013706	polr1e	99	44.203	Xiphophorus_couchianus
ENSUAMG00000012474	POLR1E	98	47.354	ENSXMAG00000012484	polr1e	99	45.411	Xiphophorus_maculatus