EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000012829 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: FLJ10024
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 3920 bases
Position: chrLZNR01006728.1:111369-115288
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000016084	Ribosomal_L20	PF00453.18	3e-36	1	1
ENSUAMP00000016088	Ribosomal_L20	PF00453.18	5.8e-24	1	1
ENSUAMP00000016086	Ribosomal_L20	PF00453.18	4.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000018026	-	339	-	ENSUAMP00000016086	112 (aa)	-	-
ENSUAMT00000018024	-	450	-	ENSUAMP00000016084	149 (aa)	-	-
ENSUAMT00000018028	-	294	-	ENSUAMP00000016088	97 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000012829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000012829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000012829	-	88	66.912	ENSUAMG00000028406	-	89	66.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000012829	-	100	89.262	ENSG00000242485	MRPL20	100	89.262	Homo_sapiens
ENSUAMG00000012829	-	99	75.000	ENSAPOG00000011835	mrpl20	100	75.000	Acanthochromis_polyacanthus
ENSUAMG00000012829	-	99	91.216	ENSAMEG00000013932	MRPL20	99	91.216	Ailuropoda_melanoleuca
ENSUAMG00000012829	-	100	73.196	ENSACIG00000019179	mrpl20	98	72.603	Amphilophus_citrinellus
ENSUAMG00000012829	-	100	73.196	ENSAOCG00000007734	mrpl20	98	72.603	Amphiprion_ocellaris
ENSUAMG00000012829	-	100	73.196	ENSAPEG00000014049	mrpl20	98	71.918	Amphiprion_percula
ENSUAMG00000012829	-	100	75.258	ENSATEG00000007369	mrpl20	98	71.918	Anabas_testudineus
ENSUAMG00000012829	-	99	74.830	ENSACAG00000009143	MRPL20	99	74.830	Anolis_carolinensis
ENSUAMG00000012829	-	100	80.263	ENSANAG00000021078	-	100	80.263	Aotus_nancymaae
ENSUAMG00000012829	-	91	72.593	ENSACLG00000021726	mrpl20	87	72.593	Astatotilapia_calliptera
ENSUAMG00000012829	-	83	69.106	ENSAMXG00000035403	mrpl20	87	69.106	Astyanax_mexicanus
ENSUAMG00000012829	-	100	88.591	ENSBTAG00000004872	MRPL20	75	88.591	Bos_taurus
ENSUAMG00000012829	-	100	91.275	ENSCJAG00000039231	-	100	91.275	Callithrix_jacchus
ENSUAMG00000012829	-	100	96.644	ENSCAFG00000019259	MRPL20	100	96.644	Canis_familiaris
ENSUAMG00000012829	-	74	89.189	ENSCAFG00020025880	-	65	89.189	Canis_lupus_dingo
ENSUAMG00000012829	-	100	88.591	ENSCHIG00000010545	MRPL20	100	88.591	Capra_hircus
ENSUAMG00000012829	-	100	95.302	ENSTSYG00000033620	MRPL20	100	95.302	Carlito_syrichta
ENSUAMG00000012829	-	100	89.262	ENSCPOG00000023001	MRPL20	100	89.262	Cavia_porcellus
ENSUAMG00000012829	-	100	89.933	ENSCCAG00000032768	-	100	89.933	Cebus_capucinus
ENSUAMG00000012829	-	100	89.933	ENSCATG00000033927	MRPL20	100	89.933	Cercocebus_atys
ENSUAMG00000012829	-	86	78.125	ENSCATG00000040437	-	67	78.125	Cercocebus_atys
ENSUAMG00000012829	-	100	87.500	ENSCLAG00000009757	-	100	87.500	Chinchilla_lanigera
ENSUAMG00000012829	-	95	72.826	ENSCLAG00000011866	-	100	56.376	Chinchilla_lanigera
ENSUAMG00000012829	-	100	89.933	ENSCSAG00000000688	-	100	89.933	Chlorocebus_sabaeus
ENSUAMG00000012829	-	100	89.262	ENSCSAG00000019479	-	100	89.262	Chlorocebus_sabaeus
ENSUAMG00000012829	-	100	82.143	ENSCPBG00000022905	MRPL20	100	82.143	Chrysemys_picta_bellii
ENSUAMG00000012829	-	100	77.519	ENSCANG00000039625	MRPL20	100	77.519	Colobus_angolensis_palliatus
ENSUAMG00000012829	-	100	89.933	ENSCGRG00001024028	Mrpl20	100	89.933	Cricetulus_griseus_chok1gshd
ENSUAMG00000012829	-	100	89.933	ENSCGRG00000007447	Mrpl20	100	89.933	Cricetulus_griseus_crigri
ENSUAMG00000012829	-	100	71.134	ENSCSEG00000002016	mrpl20	85	70.548	Cynoglossus_semilaevis
ENSUAMG00000012829	-	98	68.493	ENSCVAG00000022768	mrpl20	99	68.493	Cyprinodon_variegatus
ENSUAMG00000012829	-	100	63.087	ENSDARG00000090462	mrpl20	100	63.087	Danio_rerio
ENSUAMG00000012829	-	99	86.395	ENSDNOG00000044958	MRPL20	99	86.395	Dasypus_novemcinctus
ENSUAMG00000012829	-	74	91.566	ENSDORG00000028591	Mrpl20	100	91.566	Dipodomys_ordii
ENSUAMG00000012829	-	89	40.698	FBgn0036335	mRpL20	82	40.650	Drosophila_melanogaster
ENSUAMG00000012829	-	99	72.789	ENSETEG00000012315	MRPL20	99	72.789	Echinops_telfairi
ENSUAMG00000012829	-	99	67.347	ENSEBUG00000002214	mrpl20	99	67.347	Eptatretus_burgeri
ENSUAMG00000012829	-	100	92.617	ENSEASG00005014515	MRPL20	100	92.617	Equus_asinus_asinus
ENSUAMG00000012829	-	100	92.617	ENSECAG00000018364	MRPL20	100	92.617	Equus_caballus
ENSUAMG00000012829	-	81	67.500	ENSEEUG00000004596	-	100	67.500	Erinaceus_europaeus
ENSUAMG00000012829	-	100	72.165	ENSELUG00000013398	mrpl20	98	72.603	Esox_lucius
ENSUAMG00000012829	-	99	95.946	ENSFCAG00000033203	MRPL20	99	95.946	Felis_catus
ENSUAMG00000012829	-	100	71.812	ENSFALG00000009334	MRPL20	100	71.812	Ficedula_albicollis
ENSUAMG00000012829	-	100	87.248	ENSFDAG00000013320	MRPL20	100	87.248	Fukomys_damarensis
ENSUAMG00000012829	-	100	68.041	ENSFHEG00000004769	mrpl20	99	68.493	Fundulus_heteroclitus
ENSUAMG00000012829	-	100	70.103	ENSGMOG00000008125	mrpl20	100	70.139	Gadus_morhua
ENSUAMG00000012829	-	100	78.523	ENSGALG00000001542	MRPL20	100	78.523	Gallus_gallus
ENSUAMG00000012829	-	100	68.041	ENSGAFG00000021580	mrpl20	99	69.178	Gambusia_affinis
ENSUAMG00000012829	-	100	71.134	ENSGACG00000001134	mrpl20	98	71.233	Gasterosteus_aculeatus
ENSUAMG00000012829	-	100	82.550	ENSGAGG00000001945	MRPL20	100	82.550	Gopherus_agassizii
ENSUAMG00000012829	-	100	89.262	ENSGGOG00000027251	-	100	89.262	Gorilla_gorilla
ENSUAMG00000012829	-	100	73.196	ENSHBUG00000023626	mrpl20	98	71.918	Haplochromis_burtoni
ENSUAMG00000012829	-	100	85.906	ENSHGLG00000017538	MRPL20	100	85.906	Heterocephalus_glaber_female
ENSUAMG00000012829	-	100	86.577	ENSHGLG00100012816	MRPL20	100	86.577	Heterocephalus_glaber_male
ENSUAMG00000012829	-	96	73.118	ENSHCOG00000005830	mrpl20	98	65.753	Hippocampus_comes
ENSUAMG00000012829	-	62	43.333	ENSHCOG00000010669	-	83	43.333	Hippocampus_comes
ENSUAMG00000012829	-	99	66.667	ENSIPUG00000018055	mrpl20	99	66.667	Ictalurus_punctatus
ENSUAMG00000012829	-	100	91.071	ENSJJAG00000020728	Mrpl20	100	91.071	Jaculus_jaculus
ENSUAMG00000012829	-	100	71.134	ENSKMAG00000021650	mrpl20	98	70.548	Kryptolebias_marmoratus
ENSUAMG00000012829	-	100	71.134	ENSLBEG00000021562	mrpl20	98	70.548	Labrus_bergylta
ENSUAMG00000012829	-	100	81.208	ENSLACG00000019149	MRPL20	100	81.208	Latimeria_chalumnae
ENSUAMG00000012829	-	99	91.837	ENSLAFG00000010706	MRPL20	99	91.837	Loxodonta_africana
ENSUAMG00000012829	-	100	89.933	ENSMFAG00000043214	MRPL20	100	89.933	Macaca_fascicularis
ENSUAMG00000012829	-	94	75.714	ENSMFAG00000046195	-	83	75.714	Macaca_fascicularis
ENSUAMG00000012829	-	95	86.957	ENSMMUG00000038877	MRPL20	74	83.505	Macaca_mulatta
ENSUAMG00000012829	-	100	92.771	ENSMNEG00000041891	MRPL20	100	89.933	Macaca_nemestrina
ENSUAMG00000012829	-	89	77.444	ENSMNEG00000000027	-	68	77.444	Macaca_nemestrina
ENSUAMG00000012829	-	91	76.296	ENSMLEG00000037605	-	83	76.296	Mandrillus_leucophaeus
ENSUAMG00000012829	-	81	91.667	ENSMLEG00000037086	MRPL20	100	91.667	Mandrillus_leucophaeus
ENSUAMG00000012829	-	100	73.196	ENSMAMG00000023884	mrpl20	98	72.603	Mastacembelus_armatus
ENSUAMG00000012829	-	100	73.196	ENSMZEG00005011376	mrpl20	98	71.918	Maylandia_zebra
ENSUAMG00000012829	-	81	77.686	ENSMGAG00000002774	MRPL20	82	77.686	Meleagris_gallopavo
ENSUAMG00000012829	-	100	88.591	ENSMAUG00000013299	Mrpl20	100	88.591	Mesocricetus_auratus
ENSUAMG00000012829	-	100	91.946	ENSMICG00000041892	MRPL20	100	91.946	Microcebus_murinus
ENSUAMG00000012829	-	100	89.933	ENSMOCG00000000404	-	100	89.933	Microtus_ochrogaster
ENSUAMG00000012829	-	100	83.221	ENSMOCG00000009545	-	100	83.221	Microtus_ochrogaster
ENSUAMG00000012829	-	97	68.807	ENSMMOG00000021753	mrpl20	97	68.807	Mola_mola
ENSUAMG00000012829	-	99	83.673	ENSMODG00000006562	MRPL20	99	83.673	Monodelphis_domestica
ENSUAMG00000012829	-	100	70.103	ENSMALG00000018593	mrpl20	98	69.863	Monopterus_albus
ENSUAMG00000012829	-	100	92.617	MGP_CAROLIEiJ_G0026904	Mrpl20	100	92.617	Mus_caroli
ENSUAMG00000012829	-	100	93.289	ENSMUSG00000029066	Mrpl20	100	93.289	Mus_musculus
ENSUAMG00000012829	-	100	88.591	MGP_PahariEiJ_G0029252	Mrpl20	100	88.591	Mus_pahari
ENSUAMG00000012829	-	100	93.289	MGP_SPRETEiJ_G0027898	Mrpl20	100	93.289	Mus_spretus
ENSUAMG00000012829	-	100	89.262	ENSMLUG00000011857	MRPL20	100	89.262	Myotis_lucifugus
ENSUAMG00000012829	-	100	89.262	ENSNGAG00000021688	Mrpl20	100	89.262	Nannospalax_galili
ENSUAMG00000012829	-	100	73.196	ENSNBRG00000006018	mrpl20	98	71.918	Neolamprologus_brichardi
ENSUAMG00000012829	-	75	90.476	ENSNLEG00000013868	-	81	91.566	Nomascus_leucogenys
ENSUAMG00000012829	-	100	88.591	ENSODEG00000010734	MRPL20	100	88.591	Octodon_degus
ENSUAMG00000012829	-	100	73.196	ENSONIG00000018914	mrpl20	98	72.603	Oreochromis_niloticus
ENSUAMG00000012829	-	100	68.041	ENSORLG00000018304	mrpl20	98	69.178	Oryzias_latipes
ENSUAMG00000012829	-	100	68.041	ENSORLG00020009128	mrpl20	98	69.178	Oryzias_latipes_hni
ENSUAMG00000012829	-	100	68.041	ENSORLG00015005156	mrpl20	98	69.178	Oryzias_latipes_hsok
ENSUAMG00000012829	-	100	71.134	ENSOMEG00000015654	mrpl20	98	71.233	Oryzias_melastigma
ENSUAMG00000012829	-	100	93.289	ENSOGAG00000005968	MRPL20	100	93.289	Otolemur_garnettii
ENSUAMG00000012829	-	100	88.591	ENSOARG00000003529	MRPL20	100	88.591	Ovis_aries
ENSUAMG00000012829	-	100	89.262	ENSPPAG00000042350	-	100	89.262	Pan_paniscus
ENSUAMG00000012829	-	99	96.622	ENSPPRG00000009188	MRPL20	99	96.622	Panthera_pardus
ENSUAMG00000012829	-	80	92.222	ENSPTIG00000020769	MRPL20	99	92.222	Panthera_tigris_altaica
ENSUAMG00000012829	-	100	89.262	ENSPTRG00000000029	MRPL20	100	89.262	Pan_troglodytes
ENSUAMG00000012829	-	94	74.286	ENSPANG00000036197	-	100	74.286	Papio_anubis
ENSUAMG00000012829	-	100	89.933	ENSPANG00000015802	MRPL20	100	89.933	Papio_anubis
ENSUAMG00000012829	-	100	69.128	ENSPKIG00000002248	mrpl20	100	69.128	Paramormyrops_kingsleyae
ENSUAMG00000012829	-	95	73.944	ENSPSIG00000003939	MRPL20	100	73.944	Pelodiscus_sinensis
ENSUAMG00000012829	-	50	37.662	ENSPMGG00000022271	-	54	37.662	Periophthalmus_magnuspinnatus
ENSUAMG00000012829	-	100	75.258	ENSPMGG00000003966	mrpl20	97	73.793	Periophthalmus_magnuspinnatus
ENSUAMG00000012829	-	100	70.470	ENSPEMG00000009458	-	85	70.470	Peromyscus_maniculatus_bairdii
ENSUAMG00000012829	-	77	37.333	ENSPMAG00000009990	-	75	40.426	Petromyzon_marinus
ENSUAMG00000012829	-	99	85.034	ENSPCIG00000007747	MRPL20	99	85.034	Phascolarctos_cinereus
ENSUAMG00000012829	-	100	65.979	ENSPFOG00000018163	mrpl20	99	67.808	Poecilia_formosa
ENSUAMG00000012829	-	100	65.979	ENSPLAG00000016451	mrpl20	99	67.808	Poecilia_latipinna
ENSUAMG00000012829	-	100	65.979	ENSPMEG00000002561	mrpl20	99	67.808	Poecilia_mexicana
ENSUAMG00000012829	-	91	70.455	ENSPREG00000004925	mrpl20	99	62.585	Poecilia_reticulata
ENSUAMG00000012829	-	99	92.517	ENSPCAG00000001425	MRPL20	99	92.517	Procavia_capensis
ENSUAMG00000012829	-	99	85.714	ENSPCOG00000004450	-	99	85.714	Propithecus_coquereli
ENSUAMG00000012829	-	100	93.960	ENSPCOG00000025653	-	100	93.960	Propithecus_coquereli
ENSUAMG00000012829	-	100	73.196	ENSPNYG00000008626	mrpl20	98	71.918	Pundamilia_nyererei
ENSUAMG00000012829	-	100	69.072	ENSPNAG00000016694	mrpl20	99	69.388	Pygocentrus_nattereri
ENSUAMG00000012829	-	100	89.933	ENSRNOG00000018647	Mrpl20	100	89.933	Rattus_norvegicus
ENSUAMG00000012829	-	100	90.604	ENSRBIG00000042278	MRPL20	100	90.604	Rhinopithecus_bieti
ENSUAMG00000012829	-	100	90.604	ENSRROG00000003574	MRPL20	100	90.604	Rhinopithecus_roxellana
ENSUAMG00000012829	-	74	90.361	ENSSBOG00000035454	-	100	90.361	Saimiri_boliviensis_boliviensis
ENSUAMG00000012829	-	97	81.915	ENSSHAG00000008197	MRPL20	99	73.203	Sarcophilus_harrisii
ENSUAMG00000012829	-	100	67.785	ENSSFOG00015016009	mrpl20	100	67.785	Scleropages_formosus
ENSUAMG00000012829	-	100	71.134	ENSSMAG00000000214	mrpl20	98	72.603	Scophthalmus_maximus
ENSUAMG00000012829	-	100	74.227	ENSSDUG00000008646	mrpl20	98	73.973	Seriola_dumerili
ENSUAMG00000012829	-	100	74.227	ENSSLDG00000023171	mrpl20	98	73.973	Seriola_lalandi_dorsalis
ENSUAMG00000012829	-	99	74.150	ENSSPUG00000016911	MRPL20	99	74.150	Sphenodon_punctatus
ENSUAMG00000012829	-	99	73.958	ENSSPAG00000012887	mrpl20	98	71.233	Stegastes_partitus
ENSUAMG00000012829	-	99	92.517	ENSSSCG00000033374	MRPL20	99	92.517	Sus_scrofa
ENSUAMG00000012829	-	81	77.500	ENSTGUG00000003113	MRPL20	98	77.500	Taeniopygia_guttata
ENSUAMG00000012829	-	100	71.134	ENSTRUG00000021410	mrpl20	97	70.345	Takifugu_rubripes
ENSUAMG00000012829	-	100	71.141	ENSTNIG00000014657	mrpl20	100	71.141	Tetraodon_nigroviridis
ENSUAMG00000012829	-	100	93.289	ENSTBEG00000008735	MRPL20	100	93.289	Tupaia_belangeri
ENSUAMG00000012829	-	79	94.068	ENSTTRG00000017046	MRPL20	98	94.068	Tursiops_truncatus
ENSUAMG00000012829	-	88	66.912	ENSUMAG00000003240	-	89	66.912	Ursus_maritimus
ENSUAMG00000012829	-	83	88.776	ENSUMAG00000001917	-	86	88.776	Ursus_maritimus
ENSUAMG00000012829	-	74	91.566	ENSVPAG00000001846	-	100	91.566	Vicugna_pacos
ENSUAMG00000012829	-	100	97.321	ENSVVUG00000004455	MRPL20	100	97.321	Vulpes_vulpes
ENSUAMG00000012829	-	100	75.168	ENSXETG00000011118	mrpl20	100	75.168	Xenopus_tropicalis
ENSUAMG00000012829	-	98	67.123	ENSXCOG00000004220	mrpl20	99	67.123	Xiphophorus_couchianus
ENSUAMG00000012829	-	98	67.123	ENSXMAG00000016652	mrpl20	99	67.123	Xiphophorus_maculatus