EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000012878 (Gene tree)
Gene ID: -
Gene Symbol: MRPS18C
Alias: CGI-134|FLJ11146|FLJ22967|MRPS18-1
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 4542 bases
Position: chrLZNR01000927.1:669057-673598
Accession: 16633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000016160	Ribosomal_S18	PF01084.20	8.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000018101	MRPS18C-201	605	-	ENSUAMP00000016160	143 (aa)	-	UPI0004E007E7

Gene Model

Click here to download ENSUAMG00000012878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000012878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000012878	MRPS18C	100	87.500	ENSG00000163319	MRPS18C	100	87.500	Homo_sapiens
ENSUAMG00000012878	MRPS18C	100	86.111	ENSAMEG00000004915	MRPS18C	100	86.111	Ailuropoda_melanoleuca
ENSUAMG00000012878	MRPS18C	100	76.389	ENSANAG00000028055	-	100	76.389	Aotus_nancymaae
ENSUAMG00000012878	MRPS18C	99	76.667	ENSANAG00000025323	-	95	76.667	Aotus_nancymaae
ENSUAMG00000012878	MRPS18C	100	83.217	ENSBTAG00000018155	MRPS18C	100	83.217	Bos_taurus
ENSUAMG00000012878	MRPS18C	100	61.538	ENSBTAG00000049836	-	100	61.538	Bos_taurus
ENSUAMG00000012878	MRPS18C	100	88.194	ENSCJAG00000042247	MRPS18C	97	88.194	Callithrix_jacchus
ENSUAMG00000012878	MRPS18C	100	90.909	ENSCAFG00020010491	MRPS18C	100	90.909	Canis_lupus_dingo
ENSUAMG00000012878	MRPS18C	100	73.427	ENSCHIG00000022740	-	100	73.427	Capra_hircus
ENSUAMG00000012878	MRPS18C	91	89.231	ENSCHIG00000004461	-	91	89.231	Capra_hircus
ENSUAMG00000012878	MRPS18C	99	70.213	ENSCHIG00000018805	-	99	70.213	Capra_hircus
ENSUAMG00000012878	MRPS18C	75	72.222	ENSCHIG00000019359	-	98	72.222	Capra_hircus
ENSUAMG00000012878	MRPS18C	100	56.250	ENSCHIG00000016551	-	100	56.250	Capra_hircus
ENSUAMG00000012878	MRPS18C	100	86.014	ENSTSYG00000012924	MRPS18C	100	86.014	Carlito_syrichta
ENSUAMG00000012878	MRPS18C	100	84.028	ENSCPOG00000009198	MRPS18C	100	84.028	Cavia_porcellus
ENSUAMG00000012878	MRPS18C	100	75.694	ENSCCAG00000028283	-	100	75.694	Cebus_capucinus
ENSUAMG00000012878	MRPS18C	99	74.126	ENSCCAG00000025155	-	95	74.126	Cebus_capucinus
ENSUAMG00000012878	MRPS18C	100	86.806	ENSCCAG00000026577	-	100	86.806	Cebus_capucinus
ENSUAMG00000012878	MRPS18C	100	84.722	ENSCCAG00000019347	-	100	84.722	Cebus_capucinus
ENSUAMG00000012878	MRPS18C	100	88.194	ENSCATG00000040697	MRPS18C	100	88.194	Cercocebus_atys
ENSUAMG00000012878	MRPS18C	100	82.877	ENSCLAG00000008205	-	100	82.877	Chinchilla_lanigera
ENSUAMG00000012878	MRPS18C	100	82.639	ENSCLAG00000017397	-	100	82.639	Chinchilla_lanigera
ENSUAMG00000012878	MRPS18C	100	88.194	ENSCANG00000038907	MRPS18C	100	88.194	Colobus_angolensis_palliatus
ENSUAMG00000012878	MRPS18C	99	65.734	ENSCANG00000037347	-	100	63.636	Colobus_angolensis_palliatus
ENSUAMG00000012878	MRPS18C	100	76.224	ENSCANG00000041165	-	100	76.224	Colobus_angolensis_palliatus
ENSUAMG00000012878	MRPS18C	100	84.722	ENSCGRG00001000103	Mrps18c	100	84.722	Cricetulus_griseus_chok1gshd
ENSUAMG00000012878	MRPS18C	100	84.722	ENSCGRG00000002192	Mrps18c	100	84.722	Cricetulus_griseus_crigri
ENSUAMG00000012878	MRPS18C	99	82.394	ENSDORG00000012749	Mrps18c	100	82.394	Dipodomys_ordii
ENSUAMG00000012878	MRPS18C	100	58.741	ENSETEG00000012223	-	100	58.741	Echinops_telfairi
ENSUAMG00000012878	MRPS18C	100	93.007	ENSEASG00005013234	MRPS18C	100	93.007	Equus_asinus_asinus
ENSUAMG00000012878	MRPS18C	100	93.706	ENSECAG00000020387	MRPS18C	100	93.706	Equus_caballus
ENSUAMG00000012878	MRPS18C	100	63.636	ENSEEUG00000003504	MRPS18C	99	63.636	Erinaceus_europaeus
ENSUAMG00000012878	MRPS18C	100	91.608	ENSFCAG00000042464	MRPS18C	100	91.608	Felis_catus
ENSUAMG00000012878	MRPS18C	100	84.028	ENSFDAG00000000250	-	100	84.028	Fukomys_damarensis
ENSUAMG00000012878	MRPS18C	100	73.611	ENSFDAG00000008778	-	100	73.611	Fukomys_damarensis
ENSUAMG00000012878	MRPS18C	100	65.972	ENSGGOG00000040785	-	100	65.972	Gorilla_gorilla
ENSUAMG00000012878	MRPS18C	100	60.417	ENSGGOG00000037903	-	100	60.417	Gorilla_gorilla
ENSUAMG00000012878	MRPS18C	100	72.917	ENSGGOG00000008603	MRPS18C	100	72.917	Gorilla_gorilla
ENSUAMG00000012878	MRPS18C	100	78.472	ENSHGLG00000012671	-	98	78.472	Heterocephalus_glaber_female
ENSUAMG00000012878	MRPS18C	100	84.932	ENSHGLG00000002953	-	100	84.932	Heterocephalus_glaber_female
ENSUAMG00000012878	MRPS18C	100	80.556	ENSHGLG00000020134	-	100	80.556	Heterocephalus_glaber_female
ENSUAMG00000012878	MRPS18C	100	80.556	ENSHGLG00100019678	-	100	80.556	Heterocephalus_glaber_male
ENSUAMG00000012878	MRPS18C	100	84.932	ENSHGLG00100016235	-	100	84.932	Heterocephalus_glaber_male
ENSUAMG00000012878	MRPS18C	100	78.472	ENSHGLG00100015568	-	98	78.472	Heterocephalus_glaber_male
ENSUAMG00000012878	MRPS18C	100	87.500	ENSSTOG00000007989	MRPS18C	100	87.500	Ictidomys_tridecemlineatus
ENSUAMG00000012878	MRPS18C	100	56.643	ENSJJAG00000022437	Mrps18c	100	56.643	Jaculus_jaculus
ENSUAMG00000012878	MRPS18C	100	84.028	ENSLAFG00000001059	MRPS18C	100	84.028	Loxodonta_africana
ENSUAMG00000012878	MRPS18C	100	86.806	ENSMFAG00000003991	MRPS18C	100	86.806	Macaca_fascicularis
ENSUAMG00000012878	MRPS18C	100	70.833	ENSMFAG00000041276	-	100	70.833	Macaca_fascicularis
ENSUAMG00000012878	MRPS18C	100	76.389	ENSMMUG00000039146	-	100	76.389	Macaca_mulatta
ENSUAMG00000012878	MRPS18C	100	79.167	ENSMMUG00000048717	-	100	79.167	Macaca_mulatta
ENSUAMG00000012878	MRPS18C	100	68.750	ENSMMUG00000015353	MRPS18C	100	68.750	Macaca_mulatta
ENSUAMG00000012878	MRPS18C	100	86.806	ENSMNEG00000043663	MRPS18C	100	86.806	Macaca_nemestrina
ENSUAMG00000012878	MRPS18C	100	68.531	ENSMNEG00000018700	-	100	68.531	Macaca_nemestrina
ENSUAMG00000012878	MRPS18C	100	88.194	ENSMLEG00000038884	MRPS18C	100	88.194	Mandrillus_leucophaeus
ENSUAMG00000012878	MRPS18C	100	84.028	ENSMICG00000032609	-	100	84.028	Microcebus_murinus
ENSUAMG00000012878	MRPS18C	100	63.194	ENSMICG00000037615	-	100	63.194	Microcebus_murinus
ENSUAMG00000012878	MRPS18C	100	81.250	ENSMOCG00000009898	-	100	81.250	Microtus_ochrogaster
ENSUAMG00000012878	MRPS18C	100	82.639	ENSMOCG00000015591	-	100	82.639	Microtus_ochrogaster
ENSUAMG00000012878	MRPS18C	97	77.241	ENSMODG00000020773	MRPS18C	99	77.241	Monodelphis_domestica
ENSUAMG00000012878	MRPS18C	100	80.822	MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.822	Mus_caroli
ENSUAMG00000012878	MRPS18C	100	80.822	ENSMUSG00000016833	Mrps18c	100	80.822	Mus_musculus
ENSUAMG00000012878	MRPS18C	100	82.192	MGP_PahariEiJ_G0017236	Mrps18c	100	82.192	Mus_pahari
ENSUAMG00000012878	MRPS18C	83	80.328	MGP_SPRETEiJ_G0028455	Mrps18c	93	80.328	Mus_spretus
ENSUAMG00000012878	MRPS18C	100	81.818	ENSMLUG00000017057	MRPS18C	100	81.818	Myotis_lucifugus
ENSUAMG00000012878	MRPS18C	85	86.992	ENSNGAG00000015980	Mrps18c	100	82.639	Nannospalax_galili
ENSUAMG00000012878	MRPS18C	100	87.500	ENSNLEG00000009119	MRPS18C	100	87.500	Nomascus_leucogenys
ENSUAMG00000012878	MRPS18C	100	81.250	ENSNLEG00000018188	-	100	81.250	Nomascus_leucogenys
ENSUAMG00000012878	MRPS18C	69	78.788	ENSOPRG00000004113	MRPS18C	68	78.788	Ochotona_princeps
ENSUAMG00000012878	MRPS18C	100	85.417	ENSODEG00000020349	-	100	85.417	Octodon_degus
ENSUAMG00000012878	MRPS18C	100	84.247	ENSODEG00000007599	-	100	84.247	Octodon_degus
ENSUAMG00000012878	MRPS18C	100	85.315	ENSOARG00000002770	MRPS18C	100	85.315	Ovis_aries
ENSUAMG00000012878	MRPS18C	100	87.500	ENSPPAG00000037122	MRPS18C	100	87.500	Pan_paniscus
ENSUAMG00000012878	MRPS18C	100	61.111	ENSPPAG00000037400	-	100	61.111	Pan_paniscus
ENSUAMG00000012878	MRPS18C	100	90.909	ENSPPRG00000011089	MRPS18C	100	90.909	Panthera_pardus
ENSUAMG00000012878	MRPS18C	100	90.210	ENSPTIG00000021242	MRPS18C	100	90.210	Panthera_tigris_altaica
ENSUAMG00000012878	MRPS18C	100	87.500	ENSPTRG00000016233	MRPS18C	100	87.500	Pan_troglodytes
ENSUAMG00000012878	MRPS18C	100	59.028	ENSPTRG00000047058	-	100	59.028	Pan_troglodytes
ENSUAMG00000012878	MRPS18C	100	86.806	ENSPANG00000033931	MRPS18C	100	86.806	Papio_anubis
ENSUAMG00000012878	MRPS18C	100	76.389	ENSPANG00000034202	-	100	76.389	Papio_anubis
ENSUAMG00000012878	MRPS18C	100	81.944	ENSPEMG00000008390	Mrps18c	100	81.944	Peromyscus_maniculatus_bairdii
ENSUAMG00000012878	MRPS18C	99	76.596	ENSPCIG00000005376	-	100	76.596	Phascolarctos_cinereus
ENSUAMG00000012878	MRPS18C	71	94.118	ENSPCIG00000019737	-	100	94.118	Phascolarctos_cinereus
ENSUAMG00000012878	MRPS18C	98	65.000	ENSPCIG00000000097	-	99	65.000	Phascolarctos_cinereus
ENSUAMG00000012878	MRPS18C	100	88.889	ENSPPYG00000025867	MRPS18C	100	88.889	Pongo_abelii
ENSUAMG00000012878	MRPS18C	99	83.217	ENSPPYG00000025835	-	100	83.217	Pongo_abelii
ENSUAMG00000012878	MRPS18C	100	80.556	ENSPCAG00000004975	MRPS18C	100	80.556	Procavia_capensis
ENSUAMG00000012878	MRPS18C	100	84.722	ENSPCOG00000017634	MRPS18C	100	84.722	Propithecus_coquereli
ENSUAMG00000012878	MRPS18C	69	86.735	ENSPVAG00000006439	MRPS18C	100	86.735	Pteropus_vampyrus
ENSUAMG00000012878	MRPS18C	100	78.767	ENSRNOG00000002178	Mrps18c	100	78.767	Rattus_norvegicus
ENSUAMG00000012878	MRPS18C	100	60.839	ENSRBIG00000031637	-	100	60.839	Rhinopithecus_bieti
ENSUAMG00000012878	MRPS18C	100	88.194	ENSRBIG00000041685	MRPS18C	100	88.194	Rhinopithecus_bieti
ENSUAMG00000012878	MRPS18C	100	79.720	ENSRBIG00000035023	-	100	79.720	Rhinopithecus_bieti
ENSUAMG00000012878	MRPS18C	100	79.720	ENSRROG00000033834	-	100	79.720	Rhinopithecus_roxellana
ENSUAMG00000012878	MRPS18C	100	60.140	ENSRROG00000030722	-	100	60.140	Rhinopithecus_roxellana
ENSUAMG00000012878	MRPS18C	100	88.194	ENSRROG00000044334	MRPS18C	100	88.194	Rhinopithecus_roxellana
ENSUAMG00000012878	MRPS18C	92	73.684	ENSSBOG00000032292	-	97	73.684	Saimiri_boliviensis_boliviensis
ENSUAMG00000012878	MRPS18C	99	76.923	ENSSBOG00000022205	-	92	76.923	Saimiri_boliviensis_boliviensis
ENSUAMG00000012878	MRPS18C	100	86.111	ENSSBOG00000027568	-	100	86.111	Saimiri_boliviensis_boliviensis
ENSUAMG00000012878	MRPS18C	100	67.832	ENSSBOG00000029234	-	100	67.832	Saimiri_boliviensis_boliviensis
ENSUAMG00000012878	MRPS18C	92	81.022	ENSSHAG00000007084	MRPS18C	94	81.022	Sarcophilus_harrisii
ENSUAMG00000012878	MRPS18C	100	90.909	ENSSSCG00000038042	MRPS18C	100	90.909	Sus_scrofa
ENSUAMG00000012878	MRPS18C	100	83.333	ENSTBEG00000012505	MRPS18C	100	83.333	Tupaia_belangeri
ENSUAMG00000012878	MRPS18C	100	91.608	ENSTTRG00000004897	MRPS18C	100	91.608	Tursiops_truncatus
ENSUAMG00000012878	MRPS18C	100	100.000	ENSUMAG00000008829	MRPS18C	100	100.000	Ursus_maritimus
ENSUAMG00000012878	MRPS18C	100	88.112	ENSVPAG00000011358	MRPS18C	100	88.112	Vicugna_pacos
ENSUAMG00000012878	MRPS18C	100	91.608	ENSVVUG00000015672	MRPS18C	100	91.608	Vulpes_vulpes