EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000012894 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 13633 bases
Position: chrLZNR01005158.1:92-13724
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000016179	DEAD	PF00270.29	4.9e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000018125	-	1929	-	ENSUAMP00000016179	642 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000012894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000012894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000012894	-	54	32.782	ENSUAMG00000016457	DDX18	57	32.703
ENSUAMG00000012894	-	55	44.598	ENSUAMG00000007290	DDX17	71	44.598
ENSUAMG00000012894	-	75	69.758	ENSUAMG00000000177	-	77	69.758
ENSUAMG00000012894	-	53	33.429	ENSUAMG00000023036	DDX41	56	33.429
ENSUAMG00000012894	-	55	44.780	ENSUAMG00000023388	DDX5	57	44.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000012894	-	83	94.118	ENSAMEG00000007851	-	83	94.118	Ailuropoda_melanoleuca
ENSUAMG00000012894	-	83	73.112	ENSBTAG00000021814	-	83	73.112	Bos_taurus
ENSUAMG00000012894	-	83	86.397	ENSCAFG00020010029	-	83	86.397	Canis_lupus_dingo
ENSUAMG00000012894	-	82	78.967	ENSCAFG00020002717	-	82	78.967	Canis_lupus_dingo
ENSUAMG00000012894	-	83	73.665	ENSCHIG00000017351	-	83	73.665	Capra_hircus
ENSUAMG00000012894	-	61	75.064	ENSCAPG00000004247	-	76	75.064	Cavia_aperea
ENSUAMG00000012894	-	83	78.676	ENSCPOG00000003991	-	83	78.676	Cavia_porcellus
ENSUAMG00000012894	-	83	70.000	ENSCLAG00000010261	-	82	70.275	Chinchilla_lanigera
ENSUAMG00000012894	-	83	78.493	ENSCGRG00001001145	Ddx43	83	78.309	Cricetulus_griseus_chok1gshd
ENSUAMG00000012894	-	68	85.812	ENSCGRG00000010217	Ddx43	77	85.812	Cricetulus_griseus_crigri
ENSUAMG00000012894	-	83	79.520	ENSDNOG00000017589	-	83	79.304	Dasypus_novemcinctus
ENSUAMG00000012894	-	83	78.637	ENSDORG00000030010	Ddx43	83	78.637	Dipodomys_ordii
ENSUAMG00000012894	-	63	90.393	ENSETEG00000001887	-	64	90.393	Echinops_telfairi
ENSUAMG00000012894	-	83	79.450	ENSEASG00005004346	-	74	78.899	Equus_asinus_asinus
ENSUAMG00000012894	-	83	79.450	ENSECAG00000017971	DDX43	81	78.899	Equus_caballus
ENSUAMG00000012894	-	83	82.904	ENSFCAG00000031631	-	83	82.904	Felis_catus
ENSUAMG00000012894	-	68	82.838	ENSHGLG00000001118	-	77	82.838	Heterocephalus_glaber_female
ENSUAMG00000012894	-	79	75.670	ENSHGLG00100011895	-	82	75.425	Heterocephalus_glaber_male
ENSUAMG00000012894	-	70	70.199	ENSSTOG00000032538	-	78	70.199	Ictidomys_tridecemlineatus
ENSUAMG00000012894	-	83	77.757	ENSJJAG00000014184	Ddx43	83	77.757	Jaculus_jaculus
ENSUAMG00000012894	-	76	80.639	ENSLAFG00000012755	-	81	80.444	Loxodonta_africana
ENSUAMG00000012894	-	83	78.125	ENSMAUG00000001441	Ddx43	83	77.941	Mesocricetus_auratus
ENSUAMG00000012894	-	83	76.923	ENSMOCG00000012956	Ddx43	83	77.106	Microtus_ochrogaster
ENSUAMG00000012894	-	83	77.757	MGP_CAROLIEiJ_G0032467	Ddx43	83	77.574	Mus_caroli
ENSUAMG00000012894	-	83	77.941	ENSMUSG00000070291	Ddx43	83	77.757	Mus_musculus
ENSUAMG00000012894	-	83	72.316	MGP_PahariEiJ_G0015333	Ddx43	81	72.128	Mus_pahari
ENSUAMG00000012894	-	83	77.941	MGP_SPRETEiJ_G0033607	Ddx43	83	77.757	Mus_spretus
ENSUAMG00000012894	-	83	89.338	ENSMPUG00000004342	-	83	89.338	Mustela_putorius_furo
ENSUAMG00000012894	-	83	80.403	ENSMLUG00000017604	-	83	80.769	Myotis_lucifugus
ENSUAMG00000012894	-	83	77.551	ENSNGAG00000015102	Ddx43	83	78.085	Nannospalax_galili
ENSUAMG00000012894	-	54	66.286	ENSOPRG00000013523	-	61	66.286	Ochotona_princeps
ENSUAMG00000012894	-	68	81.922	ENSODEG00000016207	-	80	81.922	Octodon_degus
ENSUAMG00000012894	-	83	74.583	ENSOCUG00000006338	-	83	74.583	Oryctolagus_cuniculus
ENSUAMG00000012894	-	83	60.187	ENSOCUG00000025811	-	81	60.187	Oryctolagus_cuniculus
ENSUAMG00000012894	-	83	73.112	ENSOARG00000010873	-	83	73.112	Ovis_aries
ENSUAMG00000012894	-	83	83.272	ENSPTIG00000017842	-	83	83.272	Panthera_tigris_altaica
ENSUAMG00000012894	-	68	85.812	ENSPEMG00000023986	Ddx43	77	85.812	Peromyscus_maniculatus_bairdii
ENSUAMG00000012894	-	82	77.881	ENSPCAG00000005962	-	83	78.026	Procavia_capensis
ENSUAMG00000012894	-	68	89.041	ENSPVAG00000012718	-	77	89.041	Pteropus_vampyrus
ENSUAMG00000012894	-	83	78.125	ENSRNOG00000050868	Ddx43	83	77.941	Rattus_norvegicus
ENSUAMG00000012894	-	68	85.388	ENSSARG00000013493	-	80	85.388	Sorex_araneus
ENSUAMG00000012894	-	83	75.551	ENSSSCG00000004287	-	83	75.551	Sus_scrofa
ENSUAMG00000012894	-	68	77.574	ENSTTRG00000001488	-	77	77.574	Tursiops_truncatus
ENSUAMG00000012894	-	83	95.772	ENSUMAG00000012291	-	83	95.772	Ursus_maritimus
ENSUAMG00000012894	-	83	76.654	ENSVPAG00000004969	-	88	76.654	Vicugna_pacos
ENSUAMG00000012894	-	83	85.478	ENSVVUG00000013908	-	83	85.478	Vulpes_vulpes