EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000012990 (Gene tree)
Gene ID: -
Gene Symbol: SLBP
Alias: HBP
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 13290 bases
Position: chrLZNR01006747.1:28556-41845
Accession: 10904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000016312	SLBP_RNA_bind	PF15247.6	2.4e-29	1	1
ENSUAMP00000016310	SLBP_RNA_bind	PF15247.6	5.4e-29	1	1
ENSUAMP00000016308	SLBP_RNA_bind	PF15247.6	6.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000018269	SLBP-203	1711	-	ENSUAMP00000016312	242 (aa)	-	-
ENSUAMT00000018264	SLBP-201	1816	-	ENSUAMP00000016308	277 (aa)	-	-
ENSUAMT00000018267	SLBP-202	1756	-	ENSUAMP00000016310	257 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000012990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000012990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000012990	SLBP	100	86.643	ENSG00000163950	SLBP	100	86.643	Homo_sapiens
ENSUAMG00000012990	SLBP	84	49.808	ENSAPOG00000004953	slbp	73	57.488	Acanthochromis_polyacanthus
ENSUAMG00000012990	SLBP	78	99.078	ENSAMEG00000016915	SLBP	100	99.078	Ailuropoda_melanoleuca
ENSUAMG00000012990	SLBP	81	54.286	ENSACIG00000022308	slbp	78	58.537	Amphilophus_citrinellus
ENSUAMG00000012990	SLBP	81	50.787	ENSAOCG00000024545	slbp	73	57.488	Amphiprion_ocellaris
ENSUAMG00000012990	SLBP	84	49.808	ENSAPEG00000017629	slbp	73	57.488	Amphiprion_percula
ENSUAMG00000012990	SLBP	84	52.874	ENSATEG00000016358	slbp	73	59.615	Anabas_testudineus
ENSUAMG00000012990	SLBP	78	76.818	ENSAPLG00000015989	-	100	78.182	Anas_platyrhynchos
ENSUAMG00000012990	SLBP	100	83.884	ENSANAG00000034769	SLBP	100	83.884	Aotus_nancymaae
ENSUAMG00000012990	SLBP	81	50.800	ENSACLG00000007036	-	70	55.102	Astatotilapia_calliptera
ENSUAMG00000012990	SLBP	70	63.184	ENSAMXG00000014527	slbp	73	64.141	Astyanax_mexicanus
ENSUAMG00000012990	SLBP	100	88.087	ENSBTAG00000001328	SLBP	100	88.087	Bos_taurus
ENSUAMG00000012990	SLBP	100	82.645	ENSCJAG00000001790	SLBP	100	82.645	Callithrix_jacchus
ENSUAMG00000012990	SLBP	100	92.780	ENSCAFG00000015016	SLBP	100	92.780	Canis_familiaris
ENSUAMG00000012990	SLBP	100	92.780	ENSCAFG00020012334	SLBP	100	92.780	Canis_lupus_dingo
ENSUAMG00000012990	SLBP	100	88.809	ENSCHIG00000019364	SLBP	100	88.809	Capra_hircus
ENSUAMG00000012990	SLBP	100	86.282	ENSTSYG00000000376	SLBP	100	86.282	Carlito_syrichta
ENSUAMG00000012990	SLBP	75	87.845	ENSCAPG00000016340	SLBP	100	87.845	Cavia_aperea
ENSUAMG00000012990	SLBP	100	82.796	ENSCPOG00000000031	SLBP	100	82.796	Cavia_porcellus
ENSUAMG00000012990	SLBP	100	59.671	ENSCCAG00000026134	SLBP	85	88.571	Cebus_capucinus
ENSUAMG00000012990	SLBP	100	87.004	ENSCATG00000029173	SLBP	100	87.004	Cercocebus_atys
ENSUAMG00000012990	SLBP	100	84.116	ENSCLAG00000008157	SLBP	100	84.116	Chinchilla_lanigera
ENSUAMG00000012990	SLBP	100	71.986	ENSCSAG00000015628	SLBP	100	71.986	Chlorocebus_sabaeus
ENSUAMG00000012990	SLBP	100	72.887	ENSCPBG00000000746	SLBP	100	70.775	Chrysemys_picta_bellii
ENSUAMG00000012990	SLBP	78	92.130	ENSCANG00000041008	SLBP	100	92.130	Colobus_angolensis_palliatus
ENSUAMG00000012990	SLBP	100	87.365	ENSCGRG00001009760	-	100	87.365	Cricetulus_griseus_chok1gshd
ENSUAMG00000012990	SLBP	100	84.838	ENSCGRG00001012991	-	100	84.838	Cricetulus_griseus_chok1gshd
ENSUAMG00000012990	SLBP	100	87.365	ENSCGRG00000004506	Slbp	100	87.365	Cricetulus_griseus_crigri
ENSUAMG00000012990	SLBP	84	52.918	ENSCSEG00000020337	-	70	59.901	Cynoglossus_semilaevis
ENSUAMG00000012990	SLBP	70	56.250	ENSCVAG00000019592	-	75	55.024	Cyprinodon_variegatus
ENSUAMG00000012990	SLBP	82	55.328	ENSDARG00000100558	slbp	64	64.198	Danio_rerio
ENSUAMG00000012990	SLBP	100	78.322	ENSDNOG00000047539	SLBP	100	78.322	Dasypus_novemcinctus
ENSUAMG00000012990	SLBP	78	92.130	ENSDORG00000003028	Slbp	100	92.130	Dipodomys_ordii
ENSUAMG00000012990	SLBP	86	80.498	ENSETEG00000004641	SLBP	95	84.753	Echinops_telfairi
ENSUAMG00000012990	SLBP	75	93.956	ENSEASG00005022714	SLBP	100	94.271	Equus_asinus_asinus
ENSUAMG00000012990	SLBP	96	75.093	ENSECAG00000011689	SLBP	69	91.080	Equus_caballus
ENSUAMG00000012990	SLBP	93	48.387	ENSELUG00000012854	slbp	81	58.079	Esox_lucius
ENSUAMG00000012990	SLBP	100	93.502	ENSFCAG00000000169	SLBP	100	93.502	Felis_catus
ENSUAMG00000012990	SLBP	100	69.231	ENSFALG00000010003	-	100	66.783	Ficedula_albicollis
ENSUAMG00000012990	SLBP	92	88.189	ENSFDAG00000007592	SLBP	99	88.189	Fukomys_damarensis
ENSUAMG00000012990	SLBP	85	48.221	ENSFHEG00000007497	slbp	81	51.613	Fundulus_heteroclitus
ENSUAMG00000012990	SLBP	52	71.333	ENSGMOG00000015352	slbp	96	71.333	Gadus_morhua
ENSUAMG00000012990	SLBP	100	72.085	ENSGALG00000015712	SLBP	100	69.965	Gallus_gallus
ENSUAMG00000012990	SLBP	81	52.823	ENSGAFG00000019577	slbp	71	57.812	Gambusia_affinis
ENSUAMG00000012990	SLBP	70	56.522	ENSGACG00000019596	slbp	82	56.863	Gasterosteus_aculeatus
ENSUAMG00000012990	SLBP	86	72.358	ENSGAGG00000012096	SLBP	88	73.094	Gopherus_agassizii
ENSUAMG00000012990	SLBP	100	86.643	ENSGGOG00000003167	SLBP	100	86.643	Gorilla_gorilla
ENSUAMG00000012990	SLBP	81	50.593	ENSHBUG00000003338	-	70	55.102	Haplochromis_burtoni
ENSUAMG00000012990	SLBP	100	85.124	ENSHGLG00000005955	-	100	85.537	Heterocephalus_glaber_female
ENSUAMG00000012990	SLBP	89	84.211	ENSHGLG00000008313	-	100	79.377	Heterocephalus_glaber_female
ENSUAMG00000012990	SLBP	83	83.105	ENSHGLG00000010461	-	96	83.190	Heterocephalus_glaber_female
ENSUAMG00000012990	SLBP	89	85.088	ENSHGLG00100010510	-	100	80.156	Heterocephalus_glaber_male
ENSUAMG00000012990	SLBP	83	83.105	ENSHGLG00100014906	-	96	83.190	Heterocephalus_glaber_male
ENSUAMG00000012990	SLBP	100	85.921	ENSHGLG00100014018	-	100	85.921	Heterocephalus_glaber_male
ENSUAMG00000012990	SLBP	69	57.500	ENSHCOG00000013425	slbp	71	54.680	Hippocampus_comes
ENSUAMG00000012990	SLBP	69	64.796	ENSIPUG00000016780	slbp	72	65.957	Ictalurus_punctatus
ENSUAMG00000012990	SLBP	100	89.892	ENSSTOG00000003262	SLBP	100	89.892	Ictidomys_tridecemlineatus
ENSUAMG00000012990	SLBP	100	88.087	ENSJJAG00000020549	-	100	88.087	Jaculus_jaculus
ENSUAMG00000012990	SLBP	100	87.365	ENSJJAG00000002394	-	100	87.365	Jaculus_jaculus
ENSUAMG00000012990	SLBP	81	50.988	ENSKMAG00000008187	slbp	73	54.502	Kryptolebias_marmoratus
ENSUAMG00000012990	SLBP	83	51.373	ENSLBEG00000024709	slbp	72	57.000	Labrus_bergylta
ENSUAMG00000012990	SLBP	94	55.720	ENSLACG00000014623	SLBP	97	55.720	Latimeria_chalumnae
ENSUAMG00000012990	SLBP	88	52.809	ENSLOCG00000011027	slbp	89	52.612	Lepisosteus_oculatus
ENSUAMG00000012990	SLBP	86	82.449	ENSLAFG00000012933	SLBP	100	82.449	Loxodonta_africana
ENSUAMG00000012990	SLBP	91	88.845	ENSMFAG00000030130	SLBP	95	87.387	Macaca_fascicularis
ENSUAMG00000012990	SLBP	91	87.273	ENSMMUG00000032303	SLBP	96	92.627	Macaca_mulatta
ENSUAMG00000012990	SLBP	100	67.254	ENSMNEG00000008082	SLBP	100	67.254	Macaca_nemestrina
ENSUAMG00000012990	SLBP	93	82.101	ENSMLEG00000024639	SLBP	98	82.353	Mandrillus_leucophaeus
ENSUAMG00000012990	SLBP	81	48.800	ENSMAMG00000001046	-	73	52.582	Mastacembelus_armatus
ENSUAMG00000012990	SLBP	81	50.593	ENSMZEG00005017261	-	70	55.102	Maylandia_zebra
ENSUAMG00000012990	SLBP	78	78.341	ENSMGAG00000013085	SLBP	100	76.959	Meleagris_gallopavo
ENSUAMG00000012990	SLBP	100	88.087	ENSMAUG00000009490	Slbp	100	88.087	Mesocricetus_auratus
ENSUAMG00000012990	SLBP	100	85.199	ENSMICG00000014244	SLBP	100	85.199	Microcebus_murinus
ENSUAMG00000012990	SLBP	100	87.365	ENSMOCG00000015826	Slbp	99	87.793	Microtus_ochrogaster
ENSUAMG00000012990	SLBP	68	58.333	ENSMMOG00000010181	slbp	81	58.333	Mola_mola
ENSUAMG00000012990	SLBP	91	83.658	ENSMODG00000004304	SLBP	98	83.658	Monodelphis_domestica
ENSUAMG00000012990	SLBP	89	46.786	ENSMALG00000013883	-	58	50.862	Monopterus_albus
ENSUAMG00000012990	SLBP	100	88.448	MGP_CAROLIEiJ_G0027117	Slbp	100	88.448	Mus_caroli
ENSUAMG00000012990	SLBP	100	88.809	ENSMUSG00000004642	Slbp	100	88.809	Mus_musculus
ENSUAMG00000012990	SLBP	100	88.809	MGP_PahariEiJ_G0016901	Slbp	100	88.809	Mus_pahari
ENSUAMG00000012990	SLBP	100	88.809	MGP_SPRETEiJ_G0028113	Slbp	100	88.809	Mus_spretus
ENSUAMG00000012990	SLBP	75	97.253	ENSMPUG00000011139	SLBP	93	97.253	Mustela_putorius_furo
ENSUAMG00000012990	SLBP	78	89.908	ENSMLUG00000004425	SLBP	93	89.908	Myotis_lucifugus
ENSUAMG00000012990	SLBP	100	86.282	ENSNGAG00000020799	Slbp	100	86.282	Nannospalax_galili
ENSUAMG00000012990	SLBP	75	52.609	ENSNBRG00000006044	-	74	57.868	Neolamprologus_brichardi
ENSUAMG00000012990	SLBP	100	85.124	ENSNLEG00000000048	SLBP	100	85.124	Nomascus_leucogenys
ENSUAMG00000012990	SLBP	64	90.449	ENSMEUG00000002501	SLBP	100	90.449	Notamacropus_eugenii
ENSUAMG00000012990	SLBP	100	83.394	ENSODEG00000012641	SLBP	100	83.394	Octodon_degus
ENSUAMG00000012990	SLBP	81	52.174	ENSONIG00000017469	-	70	56.633	Oreochromis_niloticus
ENSUAMG00000012990	SLBP	78	86.175	ENSOANG00000014243	SLBP	95	88.018	Ornithorhynchus_anatinus
ENSUAMG00000012990	SLBP	82	52.697	ENSORLG00000024887	-	75	55.172	Oryzias_latipes
ENSUAMG00000012990	SLBP	82	52.282	ENSORLG00020007798	slbp	75	54.680	Oryzias_latipes_hni
ENSUAMG00000012990	SLBP	82	52.282	ENSORLG00015016656	slbp	72	55.385	Oryzias_latipes_hsok
ENSUAMG00000012990	SLBP	82	52.263	ENSOMEG00000010818	slbp	68	56.771	Oryzias_melastigma
ENSUAMG00000012990	SLBP	100	87.365	ENSOGAG00000009750	SLBP	100	87.365	Otolemur_garnettii
ENSUAMG00000012990	SLBP	78	94.470	ENSOARG00000016090	SLBP	100	94.470	Ovis_aries
ENSUAMG00000012990	SLBP	100	86.282	ENSPPAG00000033300	SLBP	100	86.282	Pan_paniscus
ENSUAMG00000012990	SLBP	90	94.000	ENSPPRG00000016897	SLBP	100	94.000	Panthera_pardus
ENSUAMG00000012990	SLBP	75	95.055	ENSPTIG00000015057	SLBP	100	95.312	Panthera_tigris_altaica
ENSUAMG00000012990	SLBP	100	85.921	ENSPTRG00000015832	SLBP	100	85.921	Pan_troglodytes
ENSUAMG00000012990	SLBP	100	82.645	ENSPANG00000004932	SLBP	100	82.645	Papio_anubis
ENSUAMG00000012990	SLBP	87	53.077	ENSPKIG00000006183	slbp	76	60.909	Paramormyrops_kingsleyae
ENSUAMG00000012990	SLBP	67	55.330	ENSPMGG00000017684	-	96	52.941	Periophthalmus_magnuspinnatus
ENSUAMG00000012990	SLBP	100	88.087	ENSPEMG00000018369	Slbp	100	88.087	Peromyscus_maniculatus_bairdii
ENSUAMG00000012990	SLBP	100	76.610	ENSPCIG00000013575	SLBP	86	76.610	Phascolarctos_cinereus
ENSUAMG00000012990	SLBP	81	52.016	ENSPFOG00000000462	slbp	67	61.290	Poecilia_formosa
ENSUAMG00000012990	SLBP	81	51.613	ENSPLAG00000008300	slbp	71	60.317	Poecilia_latipinna
ENSUAMG00000012990	SLBP	81	52.016	ENSPMEG00000020807	slbp	67	61.290	Poecilia_mexicana
ENSUAMG00000012990	SLBP	81	52.016	ENSPREG00000004561	slbp	67	61.290	Poecilia_reticulata
ENSUAMG00000012990	SLBP	100	85.921	ENSPPYG00000014529	SLBP	100	85.921	Pongo_abelii
ENSUAMG00000012990	SLBP	100	85.560	ENSPCOG00000017399	SLBP	100	85.560	Propithecus_coquereli
ENSUAMG00000012990	SLBP	100	81.227	ENSPVAG00000002807	SLBP	100	81.227	Pteropus_vampyrus
ENSUAMG00000012990	SLBP	81	50.593	ENSPNYG00000005451	-	70	55.102	Pundamilia_nyererei
ENSUAMG00000012990	SLBP	82	57.083	ENSPNAG00000018503	slbp	74	63.959	Pygocentrus_nattereri
ENSUAMG00000012990	SLBP	100	88.087	ENSRNOG00000037162	Slbp	100	88.087	Rattus_norvegicus
ENSUAMG00000012990	SLBP	100	87.004	ENSRBIG00000039159	SLBP	100	87.004	Rhinopithecus_bieti
ENSUAMG00000012990	SLBP	96	86.842	ENSRROG00000030081	SLBP	100	87.273	Rhinopithecus_roxellana
ENSUAMG00000012990	SLBP	75	91.209	ENSSBOG00000033897	SLBP	100	91.667	Saimiri_boliviensis_boliviensis
ENSUAMG00000012990	SLBP	100	77.104	ENSSHAG00000013939	SLBP	100	76.768	Sarcophilus_harrisii
ENSUAMG00000012990	SLBP	85	56.800	ENSSFOG00015019429	slbp	70	64.249	Scleropages_formosus
ENSUAMG00000012990	SLBP	75	51.515	ENSSMAG00000016028	-	73	55.288	Scophthalmus_maximus
ENSUAMG00000012990	SLBP	86	49.811	ENSSDUG00000000855	-	79	51.852	Seriola_dumerili
ENSUAMG00000012990	SLBP	74	42.233	ENSSLDG00000007554	-	63	45.161	Seriola_lalandi_dorsalis
ENSUAMG00000012990	SLBP	91	69.804	ENSSPUG00000016007	SLBP	96	69.291	Sphenodon_punctatus
ENSUAMG00000012990	SLBP	70	58.294	ENSSPAG00000004021	slbp	79	60.000	Stegastes_partitus
ENSUAMG00000012990	SLBP	100	87.726	ENSSSCG00000008676	SLBP	100	87.726	Sus_scrofa
ENSUAMG00000012990	SLBP	92	71.321	ENSTGUG00000010626	-	100	69.434	Taeniopygia_guttata
ENSUAMG00000012990	SLBP	84	51.172	ENSTRUG00000000688	slbp	68	58.824	Takifugu_rubripes
ENSUAMG00000012990	SLBP	82	48.790	ENSTNIG00000000484	-	71	54.396	Tetraodon_nigroviridis
ENSUAMG00000012990	SLBP	67	96.078	ENSTBEG00000004085	SLBP	99	68.254	Tupaia_belangeri
ENSUAMG00000012990	SLBP	78	93.981	ENSTTRG00000010901	-	100	93.981	Tursiops_truncatus
ENSUAMG00000012990	SLBP	64	89.326	ENSTTRG00000004010	-	100	89.326	Tursiops_truncatus
ENSUAMG00000012990	SLBP	75	100.000	ENSUMAG00000006119	SLBP	100	100.000	Ursus_maritimus
ENSUAMG00000012990	SLBP	100	92.058	ENSVVUG00000015578	-	100	92.058	Vulpes_vulpes
ENSUAMG00000012990	SLBP	89	58.103	ENSXETG00000003876	slbp	93	59.449	Xenopus_tropicalis
ENSUAMG00000012990	SLBP	71	56.311	ENSXCOG00000008275	slbp	71	60.417	Xiphophorus_couchianus
ENSUAMG00000012990	SLBP	81	52.419	ENSXMAG00000001331	-	66	61.290	Xiphophorus_maculatus