EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000014651 (Gene tree)
Gene ID: -
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 16495 bases
Position: chrLZNR01000672.1:112853-129347
Accession: 9784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000018473	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000020675	RAB5B-201	1853	-	ENSUAMP00000018473	215 (aa)	-	UPI0001C0D656

Gene Model

Click here to download ENSUAMG00000014651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000014651's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000014651	RAB5B	82	39.344	ENSUAMG00000022667	RAB33B	79	39.344
ENSUAMG00000014651	RAB5B	75	46.584	ENSUAMG00000026548	RAB11A	77	46.584
ENSUAMG00000014651	RAB5B	55	30.159	ENSUAMG00000009218	ARL4A	60	30.159
ENSUAMG00000014651	RAB5B	78	42.857	ENSUAMG00000009326	RAB30	83	42.857
ENSUAMG00000014651	RAB5B	71	35.948	ENSUAMG00000015761	-	66	35.948
ENSUAMG00000014651	RAB5B	100	76.856	ENSUAMG00000027471	RAB5A	99	83.607
ENSUAMG00000014651	RAB5B	82	33.333	ENSUAMG00000027527	-	96	33.333
ENSUAMG00000014651	RAB5B	78	42.442	ENSUAMG00000018967	RAB7A	83	42.442
ENSUAMG00000014651	RAB5B	90	30.102	ENSUAMG00000010578	RERG	96	30.102
ENSUAMG00000014651	RAB5B	76	46.626	ENSUAMG00000021114	RAB1B	81	46.626
ENSUAMG00000014651	RAB5B	75	38.554	ENSUAMG00000023005	RAB33A	70	38.554
ENSUAMG00000014651	RAB5B	77	32.335	ENSUAMG00000016388	KRAS	90	31.579
ENSUAMG00000014651	RAB5B	93	35.294	ENSUAMG00000028103	-	99	35.294
ENSUAMG00000014651	RAB5B	74	45.000	ENSUAMG00000015697	RAB25	76	45.000
ENSUAMG00000014651	RAB5B	78	36.571	ENSUAMG00000018451	RAB9B	85	36.571
ENSUAMG00000014651	RAB5B	78	35.882	ENSUAMG00000023026	RAB39B	80	35.882
ENSUAMG00000014651	RAB5B	74	37.500	ENSUAMG00000013367	RAB23	67	37.500
ENSUAMG00000014651	RAB5B	85	35.326	ENSUAMG00000018092	RAB12	77	35.106
ENSUAMG00000014651	RAB5B	93	35.294	ENSUAMG00000021018	-	99	35.294
ENSUAMG00000014651	RAB5B	90	43.137	ENSUAMG00000006639	-	99	43.137
ENSUAMG00000014651	RAB5B	75	44.720	ENSUAMG00000003164	RAB14	75	44.720
ENSUAMG00000014651	RAB5B	97	85.646	ENSUAMG00000024343	RAB5C	97	85.646

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000014651	RAB5B	100	99.535	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSUAMG00000014651	RAB5B	100	99.078	ENSAMEG00000003196	RAB5B	100	99.078	Ailuropoda_melanoleuca
ENSUAMG00000014651	RAB5B	100	95.814	ENSACAG00000005380	RAB5B	100	95.814	Anolis_carolinensis
ENSUAMG00000014651	RAB5B	100	99.535	ENSANAG00000033215	RAB5B	95	99.535	Aotus_nancymaae
ENSUAMG00000014651	RAB5B	100	99.070	ENSBTAG00000014129	RAB5B	100	99.070	Bos_taurus
ENSUAMG00000014651	RAB5B	100	99.535	ENSCJAG00000041780	RAB5B	95	99.535	Callithrix_jacchus
ENSUAMG00000014651	RAB5B	100	99.535	ENSCAFG00000000087	RAB5B	100	99.535	Canis_familiaris
ENSUAMG00000014651	RAB5B	100	99.535	ENSCAFG00020026094	RAB5B	100	99.535	Canis_lupus_dingo
ENSUAMG00000014651	RAB5B	97	99.519	ENSCHIG00000010333	RAB5B	96	99.519	Capra_hircus
ENSUAMG00000014651	RAB5B	100	99.070	ENSTSYG00000009576	RAB5B	100	99.070	Carlito_syrichta
ENSUAMG00000014651	RAB5B	100	99.535	ENSCPOG00000034818	RAB5B	100	99.535	Cavia_porcellus
ENSUAMG00000014651	RAB5B	100	99.535	ENSCCAG00000019480	RAB5B	100	99.535	Cebus_capucinus
ENSUAMG00000014651	RAB5B	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSUAMG00000014651	RAB5B	100	99.535	ENSCSAG00000005277	RAB5B	100	99.535	Chlorocebus_sabaeus
ENSUAMG00000014651	RAB5B	100	95.814	ENSCPBG00000012712	RAB5B	100	95.814	Chrysemys_picta_bellii
ENSUAMG00000014651	RAB5B	100	99.070	ENSCGRG00001000428	Rab5b	100	99.070	Cricetulus_griseus_chok1gshd
ENSUAMG00000014651	RAB5B	100	99.070	ENSCGRG00000009508	-	100	99.070	Cricetulus_griseus_crigri
ENSUAMG00000014651	RAB5B	100	99.535	ENSDORG00000025063	Rab5b	100	99.535	Dipodomys_ordii
ENSUAMG00000014651	RAB5B	100	99.070	ENSECAG00000023306	RAB5B	100	99.070	Equus_caballus
ENSUAMG00000014651	RAB5B	100	99.535	ENSEEUG00000006745	RAB5B	100	99.535	Erinaceus_europaeus
ENSUAMG00000014651	RAB5B	100	99.535	ENSFDAG00000008326	RAB5B	100	99.535	Fukomys_damarensis
ENSUAMG00000014651	RAB5B	100	98.605	ENSHGLG00000005995	RAB5B	100	98.605	Heterocephalus_glaber_female
ENSUAMG00000014651	RAB5B	100	98.605	ENSHGLG00100012955	RAB5B	100	98.605	Heterocephalus_glaber_male
ENSUAMG00000014651	RAB5B	100	98.140	ENSSTOG00000010536	RAB5B	100	98.140	Ictidomys_tridecemlineatus
ENSUAMG00000014651	RAB5B	100	99.070	ENSJJAG00000019506	Rab5b	100	99.070	Jaculus_jaculus
ENSUAMG00000014651	RAB5B	100	98.618	ENSLAFG00000018009	RAB5B	95	98.618	Loxodonta_africana
ENSUAMG00000014651	RAB5B	100	99.535	ENSMFAG00000029992	RAB5B	100	99.535	Macaca_fascicularis
ENSUAMG00000014651	RAB5B	100	99.535	ENSMMUG00000031853	RAB5B	100	99.535	Macaca_mulatta
ENSUAMG00000014651	RAB5B	100	99.535	ENSMNEG00000005338	RAB5B	100	99.535	Macaca_nemestrina
ENSUAMG00000014651	RAB5B	100	99.535	ENSMLEG00000034462	RAB5B	100	99.535	Mandrillus_leucophaeus
ENSUAMG00000014651	RAB5B	100	99.535	ENSMAUG00000011613	Rab5b	100	99.535	Mesocricetus_auratus
ENSUAMG00000014651	RAB5B	100	100.000	ENSMICG00000011086	RAB5B	100	100.000	Microcebus_murinus
ENSUAMG00000014651	RAB5B	100	99.535	ENSMUSG00000000711	Rab5b	100	99.535	Mus_musculus
ENSUAMG00000014651	RAB5B	100	99.535	MGP_PahariEiJ_G0031135	Rab5b	100	99.535	Mus_pahari
ENSUAMG00000014651	RAB5B	100	99.070	MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	Mus_spretus
ENSUAMG00000014651	RAB5B	99	98.148	ENSMPUG00000000946	RAB5B	89	98.148	Mustela_putorius_furo
ENSUAMG00000014651	RAB5B	100	99.535	ENSNLEG00000017570	-	100	99.535	Nomascus_leucogenys
ENSUAMG00000014651	RAB5B	100	99.535	ENSOPRG00000007883	RAB5B	100	99.535	Ochotona_princeps
ENSUAMG00000014651	RAB5B	100	99.070	ENSODEG00000003860	RAB5B	100	99.070	Octodon_degus
ENSUAMG00000014651	RAB5B	100	99.535	ENSOCUG00000013895	RAB5B	95	99.535	Oryctolagus_cuniculus
ENSUAMG00000014651	RAB5B	100	99.535	ENSOARG00000010651	RAB5B	95	99.535	Ovis_aries
ENSUAMG00000014651	RAB5B	100	99.535	ENSPPAG00000035431	RAB5B	100	99.535	Pan_paniscus
ENSUAMG00000014651	RAB5B	100	99.535	ENSPTRG00000005071	RAB5B	97	99.043	Pan_troglodytes
ENSUAMG00000014651	RAB5B	99	98.598	ENSPANG00000021075	RAB5B	97	98.598	Papio_anubis
ENSUAMG00000014651	RAB5B	100	99.535	ENSPCOG00000016461	RAB5B	100	99.535	Propithecus_coquereli
ENSUAMG00000014651	RAB5B	100	98.605	ENSRNOG00000006130	Rab5b	100	98.605	Rattus_norvegicus
ENSUAMG00000014651	RAB5B	100	99.535	ENSRBIG00000013165	RAB5B	100	99.535	Rhinopithecus_bieti
ENSUAMG00000014651	RAB5B	100	99.535	ENSRROG00000037973	RAB5B	100	99.535	Rhinopithecus_roxellana
ENSUAMG00000014651	RAB5B	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSUAMG00000014651	RAB5B	100	98.140	ENSSHAG00000007727	RAB5B	100	98.140	Sarcophilus_harrisii
ENSUAMG00000014651	RAB5B	100	99.535	ENSSARG00000006237	RAB5B	100	99.535	Sorex_araneus
ENSUAMG00000014651	RAB5B	100	95.814	ENSSPUG00000014873	RAB5B	100	95.814	Sphenodon_punctatus
ENSUAMG00000014651	RAB5B	100	99.535	ENSTTRG00000015001	RAB5B	100	99.535	Tursiops_truncatus
ENSUAMG00000014651	RAB5B	100	100.000	ENSUMAG00000016263	RAB5B	100	100.000	Ursus_maritimus
ENSUAMG00000014651	RAB5B	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes