EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000014866 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 22187 bases
Position: chrLZNR01000320.1:48679-70865
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000019431	RNA_pol_Rpb1_5	PF04998.17	1.1e-100	1	1
ENSUAMP00000019428	RNA_pol_Rpb1_5	PF04998.17	1.1e-100	1	1
ENSUAMP00000019389	RNA_pol_Rpb1_5	PF04998.17	1.1e-100	1	1
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	1	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	2	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	3	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	4	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	5	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	6	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	7	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	8	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	9	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	10	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	11	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	12	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	13	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	14	15
ENSUAMP00000019428	RNA_pol_Rpb1_R	PF05001.13	2.4e-13	15	15
ENSUAMP00000019431	RNA_pol_Rpb1_R	PF05001.13	1.9e-05	1	9
ENSUAMP00000019431	RNA_pol_Rpb1_R	PF05001.13	1.9e-05	2	9
ENSUAMP00000019431	RNA_pol_Rpb1_R	PF05001.13	1.9e-05	3	9
ENSUAMP00000019431	RNA_pol_Rpb1_R	PF05001.13	1.9e-05	4	9
ENSUAMP00000019431	RNA_pol_Rpb1_R	PF05001.13	1.9e-05	5	9
ENSUAMP00000019431	RNA_pol_Rpb1_R	PF05001.13	1.9e-05	6	9
ENSUAMP00000019431	RNA_pol_Rpb1_R	PF05001.13	1.9e-05	7	9
ENSUAMP00000019431	RNA_pol_Rpb1_R	PF05001.13	1.9e-05	8	9
ENSUAMP00000019431	RNA_pol_Rpb1_R	PF05001.13	1.9e-05	9	9
ENSUAMP00000019428	RNA_pol_Rpb1_4	PF05000.17	4.4e-38	1	1
ENSUAMP00000019431	RNA_pol_Rpb1_4	PF05000.17	4.4e-38	1	1
ENSUAMP00000019389	RNA_pol_Rpb1_4	PF05000.17	4.6e-38	1	1
ENSUAMP00000019431	RNA_pol_Rpb1_2	PF00623.20	1.2e-74	1	1
ENSUAMP00000019428	RNA_pol_Rpb1_2	PF00623.20	1.2e-74	1	1
ENSUAMP00000019389	RNA_pol_Rpb1_2	PF00623.20	1.3e-74	1	1
ENSUAMP00000019431	RNA_pol_Rpb1_3	PF04983.18	5.8e-50	1	1
ENSUAMP00000019428	RNA_pol_Rpb1_3	PF04983.18	6e-50	1	1
ENSUAMP00000019389	RNA_pol_Rpb1_3	PF04983.18	6.1e-50	1	1
ENSUAMP00000019431	RNA_pol_Rpb1_1	PF04997.12	5.6e-109	1	1
ENSUAMP00000019428	RNA_pol_Rpb1_1	PF04997.12	5.8e-109	1	1
ENSUAMP00000019389	RNA_pol_Rpb1_1	PF04997.12	5.9e-109	1	1
ENSUAMP00000019431	RNA_pol_Rpb1_7	PF04990.12	2.5e-54	1	1
ENSUAMP00000019428	RNA_pol_Rpb1_7	PF04990.12	2.5e-54	1	1
ENSUAMP00000019389	RNA_pol_Rpb1_7	PF04990.12	2.6e-54	1	1
ENSUAMP00000019431	RNA_pol_Rpb1_6	PF04992.14	1.7e-67	1	1
ENSUAMP00000019428	RNA_pol_Rpb1_6	PF04992.14	1.7e-67	1	1
ENSUAMP00000019389	RNA_pol_Rpb1_6	PF04992.14	1.7e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000021725	-	5454	-	ENSUAMP00000019428	1817 (aa)	-	-
ENSUAMT00000021727	-	5400	-	ENSUAMP00000019431	1799 (aa)	-	-
ENSUAMT00000021679	-	5514	-	ENSUAMP00000019389	1837 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000014866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000014866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000014866	-	51	31.980	ENSUAMG00000012158	-	75	31.990
ENSUAMG00000014866	-	73	37.065	ENSUAMG00000011283	POLR3A	91	37.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000014866	-	88	94.063	ENSAPOG00000006552	polr2a	88	94.056	Acanthochromis_polyacanthus
ENSUAMG00000014866	-	100	99.320	ENSAMEG00000016265	-	96	96.539	Ailuropoda_melanoleuca
ENSUAMG00000014866	-	100	91.484	ENSACIG00000015982	polr2a	93	94.356	Amphilophus_citrinellus
ENSUAMG00000014866	-	96	91.589	ENSAOCG00000004255	polr2a	95	94.293	Amphiprion_ocellaris
ENSUAMG00000014866	-	100	91.589	ENSAPEG00000012623	polr2a	93	94.293	Amphiprion_percula
ENSUAMG00000014866	-	100	91.466	ENSATEG00000019644	polr2a	93	94.166	Anabas_testudineus
ENSUAMG00000014866	-	100	97.771	ENSACAG00000014561	POLR2A	96	95.170	Anolis_carolinensis
ENSUAMG00000014866	-	100	99.567	ENSANAG00000020093	-	96	96.904	Aotus_nancymaae
ENSUAMG00000014866	-	100	91.342	ENSACLG00000006735	polr2a	93	93.976	Astatotilapia_calliptera
ENSUAMG00000014866	-	100	91.837	ENSAMXG00000020046	polr2a	93	94.420	Astyanax_mexicanus
ENSUAMG00000014866	-	100	99.567	ENSBTAG00000046765	POLR2A	96	96.904	Bos_taurus
ENSUAMG00000014866	-	99	69.137	WBGene00000123	ama-1	98	69.076	Caenorhabditis_elegans
ENSUAMG00000014866	-	100	99.628	ENSCAFG00000016532	POLR2A	99	96.884	Canis_familiaris
ENSUAMG00000014866	-	100	98.515	ENSCAFG00020007929	-	96	95.854	Canis_lupus_dingo
ENSUAMG00000014866	-	100	99.567	ENSCHIG00000027173	-	96	96.904	Capra_hircus
ENSUAMG00000014866	-	99	99.556	ENSTSYG00000012803	-	96	96.408	Carlito_syrichta
ENSUAMG00000014866	-	98	93.304	ENSCAPG00000001882	-	92	98.231	Cavia_aperea
ENSUAMG00000014866	-	100	94.940	ENSCPOG00000014812	-	100	91.516	Cavia_porcellus
ENSUAMG00000014866	-	100	99.567	ENSCCAG00000020938	-	96	96.904	Cebus_capucinus
ENSUAMG00000014866	-	100	99.505	ENSCATG00000013680	-	96	96.842	Cercocebus_atys
ENSUAMG00000014866	-	100	99.381	ENSCLAG00000012196	-	96	96.718	Chinchilla_lanigera
ENSUAMG00000014866	-	100	90.338	ENSCSAG00000011644	-	96	87.692	Chlorocebus_sabaeus
ENSUAMG00000014866	-	99	91.553	ENSCPBG00000012697	POLR2A	99	90.294	Chrysemys_picta_bellii
ENSUAMG00000014866	-	99	75.332	ENSCING00000007884	-	93	76.500	Ciona_intestinalis
ENSUAMG00000014866	-	98	74.878	ENSCSAVG00000008334	-	100	75.904	Ciona_savignyi
ENSUAMG00000014866	-	100	98.700	ENSCANG00000010622	-	96	96.037	Colobus_angolensis_palliatus
ENSUAMG00000014866	-	100	94.469	ENSCGRG00001003538	Polr2a	94	93.758	Cricetulus_griseus_chok1gshd
ENSUAMG00000014866	-	100	94.031	ENSCGRG00000012105	Polr2a	96	96.499	Cricetulus_griseus_crigri
ENSUAMG00000014866	-	100	90.909	ENSCSEG00000002635	polr2a	93	93.595	Cynoglossus_semilaevis
ENSUAMG00000014866	-	100	91.713	ENSCVAG00000005156	polr2a	92	94.241	Cyprinodon_variegatus
ENSUAMG00000014866	-	100	91.528	ENSDARG00000099966	polr2a	92	94.059	Danio_rerio
ENSUAMG00000014866	-	100	93.075	ENSDNOG00000016482	-	96	91.985	Dasypus_novemcinctus
ENSUAMG00000014866	-	100	99.567	ENSDORG00000008667	Polr2a	96	96.904	Dipodomys_ordii
ENSUAMG00000014866	-	99	68.858	FBgn0003277	RpII215	94	73.954	Drosophila_melanogaster
ENSUAMG00000014866	-	94	95.000	ENSETEG00000002540	-	86	95.000	Echinops_telfairi
ENSUAMG00000014866	-	87	87.866	ENSEBUG00000013967	polr2a	95	85.227	Eptatretus_burgeri
ENSUAMG00000014866	-	100	97.461	ENSEASG00005019114	-	93	94.861	Equus_asinus_asinus
ENSUAMG00000014866	-	100	99.505	ENSECAG00000018485	POLR2A	96	96.904	Equus_caballus
ENSUAMG00000014866	-	93	99.334	ENSEEUG00000001154	-	95	99.334	Erinaceus_europaeus
ENSUAMG00000014866	-	88	92.579	ENSELUG00000014284	polr2a	91	92.569	Esox_lucius
ENSUAMG00000014866	-	100	99.505	ENSFDAG00000008287	-	96	96.842	Fukomys_damarensis
ENSUAMG00000014866	-	99	91.713	ENSFHEG00000001768	polr2a	90	91.703	Fundulus_heteroclitus
ENSUAMG00000014866	-	92	100.000	ENSGMOG00000007725	polr2a	99	100.000	Gadus_morhua
ENSUAMG00000014866	-	96	94.300	ENSGAFG00000005389	polr2a	97	94.293	Gambusia_affinis
ENSUAMG00000014866	-	99	90.350	ENSGACG00000019366	polr2a	99	87.863	Gasterosteus_aculeatus
ENSUAMG00000014866	-	100	97.344	ENSGGOG00000014800	-	96	98.071	Gorilla_gorilla
ENSUAMG00000014866	-	99	91.342	ENSHBUG00000018937	polr2a	98	91.703	Haplochromis_burtoni
ENSUAMG00000014866	-	100	99.505	ENSHGLG00000012381	POLR2A	96	96.842	Heterocephalus_glaber_female
ENSUAMG00000014866	-	100	99.505	ENSHGLG00100014843	POLR2A	96	96.842	Heterocephalus_glaber_male
ENSUAMG00000014866	-	100	91.095	ENSHCOG00000011874	polr2a	92	93.622	Hippocampus_comes
ENSUAMG00000014866	-	100	91.218	ENSIPUG00000002613	Polr2a	93	93.786	Ictalurus_punctatus
ENSUAMG00000014866	-	100	99.567	ENSSTOG00000001304	-	96	96.904	Ictidomys_tridecemlineatus
ENSUAMG00000014866	-	100	99.443	ENSJJAG00000013049	Polr2a	96	96.780	Jaculus_jaculus
ENSUAMG00000014866	-	88	82.598	ENSKMAG00000016343	polr2a	86	89.286	Kryptolebias_marmoratus
ENSUAMG00000014866	-	100	91.218	ENSLBEG00000027652	polr2a	93	93.912	Labrus_bergylta
ENSUAMG00000014866	-	98	86.885	ENSLACG00000012071	POLR2A	95	84.489	Latimeria_chalumnae
ENSUAMG00000014866	-	100	91.338	ENSLOCG00000013863	polr2a	95	91.760	Lepisosteus_oculatus
ENSUAMG00000014866	-	100	99.505	ENSLAFG00000008626	-	96	96.904	Loxodonta_africana
ENSUAMG00000014866	-	54	98.264	ENSMFAG00000007042	-	99	98.264	Macaca_fascicularis
ENSUAMG00000014866	-	100	99.505	ENSMMUG00000023620	-	96	96.842	Macaca_mulatta
ENSUAMG00000014866	-	100	96.285	ENSMNEG00000040407	-	96	96.409	Macaca_nemestrina
ENSUAMG00000014866	-	99	93.494	ENSMLEG00000030263	-	99	98.264	Mandrillus_leucophaeus
ENSUAMG00000014866	-	100	91.342	ENSMAMG00000003351	polr2a	92	93.870	Mastacembelus_armatus
ENSUAMG00000014866	-	100	91.342	ENSMZEG00005021429	polr2a	93	93.025	Maylandia_zebra
ENSUAMG00000014866	-	55	99.898	ENSMAUG00000021055	-	99	99.898	Mesocricetus_auratus
ENSUAMG00000014866	-	100	99.443	ENSMICG00000013372	-	98	98.669	Microcebus_murinus
ENSUAMG00000014866	-	100	93.926	ENSMOCG00000018279	Polr2a	95	91.361	Microtus_ochrogaster
ENSUAMG00000014866	-	96	93.383	ENSMMOG00000012515	polr2a	94	90.960	Mola_mola
ENSUAMG00000014866	-	100	99.071	ENSMODG00000007009	-	96	96.471	Monodelphis_domestica
ENSUAMG00000014866	-	99	94.012	ENSMALG00000008716	polr2a	93	94.230	Monopterus_albus
ENSUAMG00000014866	-	100	99.567	MGP_CAROLIEiJ_G0016587	Polr2a	96	96.904	Mus_caroli
ENSUAMG00000014866	-	100	99.567	ENSMUSG00000005198	Polr2a	96	96.904	Mus_musculus
ENSUAMG00000014866	-	100	97.349	MGP_PahariEiJ_G0017718	Polr2a	96	94.698	Mus_pahari
ENSUAMG00000014866	-	100	99.567	MGP_SPRETEiJ_G0017423	Polr2a	96	96.904	Mus_spretus
ENSUAMG00000014866	-	100	99.567	ENSMPUG00000009648	-	96	96.904	Mustela_putorius_furo
ENSUAMG00000014866	-	100	98.949	ENSMLUG00000009088	-	96	96.289	Myotis_lucifugus
ENSUAMG00000014866	-	100	99.567	ENSNGAG00000002543	Polr2a	96	96.904	Nannospalax_galili
ENSUAMG00000014866	-	100	91.234	ENSNBRG00000002005	polr2a	93	94.039	Neolamprologus_brichardi
ENSUAMG00000014866	-	99	99.556	ENSNLEG00000009460	-	96	95.100	Nomascus_leucogenys
ENSUAMG00000014866	-	91	99.455	ENSMEUG00000008611	-	92	99.455	Notamacropus_eugenii
ENSUAMG00000014866	-	86	99.433	ENSOPRG00000015116	-	99	99.433	Ochotona_princeps
ENSUAMG00000014866	-	100	99.334	ENSODEG00000017674	-	95	96.038	Octodon_degus
ENSUAMG00000014866	-	100	91.528	ENSONIG00000009231	polr2a	92	93.994	Oreochromis_niloticus
ENSUAMG00000014866	-	52	97.961	ENSOANG00000003303	-	98	97.961	Ornithorhynchus_anatinus
ENSUAMG00000014866	-	100	98.287	ENSOCUG00000017929	-	100	98.136	Oryctolagus_cuniculus
ENSUAMG00000014866	-	100	91.342	ENSORLG00000006431	polr2a	93	93.976	Oryzias_latipes
ENSUAMG00000014866	-	100	91.342	ENSORLG00020010235	polr2a	93	93.976	Oryzias_latipes_hni
ENSUAMG00000014866	-	100	91.342	ENSORLG00015007075	polr2a	93	93.976	Oryzias_latipes_hsok
ENSUAMG00000014866	-	99	91.445	ENSOMEG00000010713	polr2a	100	93.986	Oryzias_melastigma
ENSUAMG00000014866	-	100	99.381	ENSOGAG00000033608	-	96	96.718	Otolemur_garnettii
ENSUAMG00000014866	-	99	96.292	ENSOARG00000013874	-	100	96.780	Ovis_aries
ENSUAMG00000014866	-	99	99.489	ENSPPAG00000043734	-	96	94.699	Pan_paniscus
ENSUAMG00000014866	-	99	99.556	ENSPTRG00000008691	POLR2A	96	95.100	Pan_troglodytes
ENSUAMG00000014866	-	100	98.700	ENSPANG00000024099	-	96	96.037	Papio_anubis
ENSUAMG00000014866	-	85	92.712	ENSPKIG00000005727	polr2a	84	84.032	Paramormyrops_kingsleyae
ENSUAMG00000014866	-	99	93.414	ENSPSIG00000014006	POLR2A	100	96.124	Pelodiscus_sinensis
ENSUAMG00000014866	-	100	93.814	ENSPMGG00000019734	polr2a	99	94.356	Periophthalmus_magnuspinnatus
ENSUAMG00000014866	-	100	99.567	ENSPEMG00000012521	Polr2a	96	96.904	Peromyscus_maniculatus_bairdii
ENSUAMG00000014866	-	98	90.719	ENSPCIG00000028851	-	92	90.719	Phascolarctos_cinereus
ENSUAMG00000014866	-	95	91.651	ENSPFOG00000007890	polr2a	90	94.180	Poecilia_formosa
ENSUAMG00000014866	-	95	91.651	ENSPLAG00000007399	polr2a	99	89.286	Poecilia_latipinna
ENSUAMG00000014866	-	95	91.651	ENSPMEG00000002071	polr2a	99	91.348	Poecilia_mexicana
ENSUAMG00000014866	-	100	91.589	ENSPREG00000013122	polr2a	93	94.230	Poecilia_reticulata
ENSUAMG00000014866	-	100	99.567	ENSPPYG00000007924	-	96	95.142	Pongo_abelii
ENSUAMG00000014866	-	91	99.737	ENSPCAG00000006951	-	88	99.737	Procavia_capensis
ENSUAMG00000014866	-	99	99.493	ENSPCOG00000025260	-	96	96.242	Propithecus_coquereli
ENSUAMG00000014866	-	100	99.257	ENSPVAG00000005069	-	96	96.594	Pteropus_vampyrus
ENSUAMG00000014866	-	100	91.404	ENSPNYG00000022340	polr2a	92	93.870	Pundamilia_nyererei
ENSUAMG00000014866	-	100	91.837	ENSPNAG00000011237	polr2a	92	94.180	Pygocentrus_nattereri
ENSUAMG00000014866	-	100	99.628	ENSRNOG00000028834	Polr2a	96	95.256	Rattus_norvegicus
ENSUAMG00000014866	-	99	99.493	ENSRBIG00000002471	-	97	95.145	Rhinopithecus_bieti
ENSUAMG00000014866	-	100	99.505	ENSRROG00000029583	-	96	95.301	Rhinopithecus_roxellana
ENSUAMG00000014866	-	88	50.061	YDL140C	RPO21	99	76.190	Saccharomyces_cerevisiae
ENSUAMG00000014866	-	100	99.567	ENSSBOG00000000808	-	96	96.904	Saimiri_boliviensis_boliviensis
ENSUAMG00000014866	-	100	99.071	ENSSHAG00000002858	-	95	96.347	Sarcophilus_harrisii
ENSUAMG00000014866	-	100	91.713	ENSSFOG00015023275	polr2a	93	94.356	Scleropages_formosus
ENSUAMG00000014866	-	100	93.630	ENSSMAG00000009137	polr2a	92	93.622	Scophthalmus_maximus
ENSUAMG00000014866	-	100	91.466	ENSSDUG00000020466	polr2a	93	94.166	Seriola_dumerili
ENSUAMG00000014866	-	100	91.466	ENSSLDG00000020613	polr2a	93	94.166	Seriola_lalandi_dorsalis
ENSUAMG00000014866	-	99	92.184	ENSSARG00000005875	-	99	94.630	Sorex_araneus
ENSUAMG00000014866	-	100	94.063	ENSSPAG00000016741	polr2a	90	94.056	Stegastes_partitus
ENSUAMG00000014866	-	100	98.700	ENSSSCG00000028278	-	96	96.037	Sus_scrofa
ENSUAMG00000014866	-	99	85.705	ENSTRUG00000012320	polr2a	81	88.181	Takifugu_rubripes
ENSUAMG00000014866	-	97	89.981	ENSTNIG00000010136	polr2a	100	89.969	Tetraodon_nigroviridis
ENSUAMG00000014866	-	75	100.000	ENSTBEG00000013294	-	58	100.000	Tupaia_belangeri
ENSUAMG00000014866	-	100	97.647	ENSTTRG00000014273	-	96	94.985	Tursiops_truncatus
ENSUAMG00000014866	-	92	100.000	ENSUMAG00000015732	-	96	100.000	Ursus_maritimus
ENSUAMG00000014866	-	63	97.010	ENSVPAG00000008842	-	76	97.010	Vicugna_pacos
ENSUAMG00000014866	-	100	99.628	ENSVVUG00000027878	-	97	95.355	Vulpes_vulpes
ENSUAMG00000014866	-	92	96.547	ENSXETG00000012465	polr2a	92	96.547	Xenopus_tropicalis
ENSUAMG00000014866	-	88	94.237	ENSXCOG00000001804	polr2a	93	91.950	Xiphophorus_couchianus
ENSUAMG00000014866	-	100	91.589	ENSXMAG00000015687	polr2a	93	94.230	Xiphophorus_maculatus