EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000014882 (Gene tree)
Gene ID: -
Gene Symbol: RBM4
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: RNA binding motif protein 4
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 24855 bases
Position: chrLZNR01003970.1:11077-35931
Accession: 9901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000018797	zf-CCHC	PF00098.23	2.1e-07	1	1
ENSUAMP00000018797	RRM_5	PF13893.6	4.1e-08	1	2
ENSUAMP00000018797	RRM_5	PF13893.6	4.1e-08	2	2
ENSUAMP00000018798	RRM_5	PF13893.6	1.9e-06	1	1
ENSUAMP00000018798	RRM_1	PF00076.22	1.6e-34	1	2
ENSUAMP00000018798	RRM_1	PF00076.22	1.6e-34	2	2
ENSUAMP00000018797	RRM_1	PF00076.22	2.1e-34	1	2
ENSUAMP00000018797	RRM_1	PF00076.22	2.1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000021024	RBM4-201	2171	-	ENSUAMP00000018797	365 (aa)	-	UPI00005A36DA
ENSUAMT00000021025	RBM4-202	1477	-	ENSUAMP00000018798	143 (aa)	-	UPI00001FACE1

Gene Model

Click here to download ENSUAMG00000014882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000014882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000014882	RBM4	92	38.983	ENSUAMG00000025051	-	80	35.780
ENSUAMG00000014882	RBM4	50	32.500	ENSUAMG00000013230	RBMXL1	50	32.500
ENSUAMG00000014882	RBM4	59	32.143	ENSUAMG00000003559	SRSF6	62	32.143
ENSUAMG00000014882	RBM4	94	30.065	ENSUAMG00000013026	ELAVL4	85	30.065
ENSUAMG00000014882	RBM4	77	32.143	ENSUAMG00000026758	SFPQ	50	34.615
ENSUAMG00000014882	RBM4	97	98.551	ENSUAMG00000004745	RBM4B	100	88.219
ENSUAMG00000014882	RBM4	87	30.769	ENSUAMG00000009532	TIAL1	86	30.631
ENSUAMG00000014882	RBM4	98	30.625	ENSUAMG00000025833	TIA1	69	30.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000014882	RBM4	99	73.224	ENSG00000248643	RBM14-RBM4	100	74.044	Homo_sapiens
ENSUAMG00000014882	RBM4	100	100.000	ENSG00000173933	RBM4	100	100.000	Homo_sapiens
ENSUAMG00000014882	RBM4	97	98.551	ENSG00000173914	RBM4B	97	98.551	Homo_sapiens
ENSUAMG00000014882	RBM4	97	98.551	ENSAMEG00000010906	RBM4B	100	87.945	Ailuropoda_melanoleuca
ENSUAMG00000014882	RBM4	100	100.000	ENSAMEG00000010914	RBM4	100	100.000	Ailuropoda_melanoleuca
ENSUAMG00000014882	RBM4	97	98.551	ENSANAG00000023478	RBM4B	97	98.551	Aotus_nancymaae
ENSUAMG00000014882	RBM4	100	96.503	ENSANAG00000033986	-	87	96.503	Aotus_nancymaae
ENSUAMG00000014882	RBM4	100	97.534	ENSBTAG00000031688	RBM4	100	97.534	Bos_taurus
ENSUAMG00000014882	RBM4	97	98.551	ENSBTAG00000000423	RBM4B	100	88.219	Bos_taurus
ENSUAMG00000014882	RBM4	97	98.551	ENSCJAG00000013666	RBM4B	97	98.551	Callithrix_jacchus
ENSUAMG00000014882	RBM4	100	100.000	ENSCAFG00000012388	RBM4	100	100.000	Canis_familiaris
ENSUAMG00000014882	RBM4	97	98.551	ENSCAFG00000012378	RBM4B	100	87.671	Canis_familiaris
ENSUAMG00000014882	RBM4	97	98.551	ENSCAFG00020015519	RBM4B	100	87.671	Canis_lupus_dingo
ENSUAMG00000014882	RBM4	100	100.000	ENSCAFG00020015515	RBM4	100	100.000	Canis_lupus_dingo
ENSUAMG00000014882	RBM4	100	97.534	ENSCHIG00000020613	RBM4	100	97.534	Capra_hircus
ENSUAMG00000014882	RBM4	97	98.551	ENSCHIG00000008907	RBM4B	100	88.219	Capra_hircus
ENSUAMG00000014882	RBM4	66	79.668	ENSTSYG00000009580	RBM4B	96	78.838	Carlito_syrichta
ENSUAMG00000014882	RBM4	94	87.850	ENSTSYG00000036168	-	86	87.850	Carlito_syrichta
ENSUAMG00000014882	RBM4	97	98.551	ENSCAPG00000009570	RBM4B	100	87.397	Cavia_aperea
ENSUAMG00000014882	RBM4	100	99.301	ENSCAPG00000016600	RBM4	100	99.301	Cavia_aperea
ENSUAMG00000014882	RBM4	97	98.551	ENSCPOG00000013689	RBM4B	100	87.397	Cavia_porcellus
ENSUAMG00000014882	RBM4	100	99.301	ENSCPOG00000013194	RBM4	100	99.301	Cavia_porcellus
ENSUAMG00000014882	RBM4	100	97.203	ENSCCAG00000007508	-	100	97.203	Cebus_capucinus
ENSUAMG00000014882	RBM4	99	72.535	ENSCCAG00000023319	-	100	73.632	Cebus_capucinus
ENSUAMG00000014882	RBM4	97	98.551	ENSCCAG00000016501	RBM4B	97	98.551	Cebus_capucinus
ENSUAMG00000014882	RBM4	97	98.551	ENSCATG00000035353	RBM4B	97	98.551	Cercocebus_atys
ENSUAMG00000014882	RBM4	97	98.551	ENSCLAG00000015287	RBM4B	100	87.397	Chinchilla_lanigera
ENSUAMG00000014882	RBM4	100	99.301	ENSCLAG00000014756	RBM4	100	99.301	Chinchilla_lanigera
ENSUAMG00000014882	RBM4	97	98.551	ENSCSAG00000008361	RBM4B	100	87.397	Chlorocebus_sabaeus
ENSUAMG00000014882	RBM4	62	98.678	ENSCHOG00000009753	RBM14-RBM4	100	98.678	Choloepus_hoffmanni
ENSUAMG00000014882	RBM4	97	98.551	ENSCHOG00000002892	RBM4B	100	88.493	Choloepus_hoffmanni
ENSUAMG00000014882	RBM4	100	93.706	ENSCPBG00000023800	-	100	73.560	Chrysemys_picta_bellii
ENSUAMG00000014882	RBM4	97	98.551	ENSCANG00000021868	RBM4B	97	98.551	Colobus_angolensis_palliatus
ENSUAMG00000014882	RBM4	100	98.601	ENSCGRG00001016609	-	100	98.601	Cricetulus_griseus_chok1gshd
ENSUAMG00000014882	RBM4	97	98.551	ENSCGRG00001024693	Rbm4b	100	85.205	Cricetulus_griseus_chok1gshd
ENSUAMG00000014882	RBM4	97	98.551	ENSCGRG00000012112	Rbm4b	100	85.205	Cricetulus_griseus_crigri
ENSUAMG00000014882	RBM4	100	98.601	ENSCGRG00000010183	-	100	98.601	Cricetulus_griseus_crigri
ENSUAMG00000014882	RBM4	100	99.452	ENSDNOG00000032390	RBM4	100	99.452	Dasypus_novemcinctus
ENSUAMG00000014882	RBM4	97	97.101	ENSDNOG00000045639	-	100	86.849	Dasypus_novemcinctus
ENSUAMG00000014882	RBM4	97	98.551	ENSDNOG00000019500	-	100	87.945	Dasypus_novemcinctus
ENSUAMG00000014882	RBM4	97	98.551	ENSDORG00000029108	Rbm4b	100	85.753	Dipodomys_ordii
ENSUAMG00000014882	RBM4	100	97.902	ENSDORG00000004538	-	100	97.902	Dipodomys_ordii
ENSUAMG00000014882	RBM4	62	63.877	ENSETEG00000018142	-	100	64.317	Echinops_telfairi
ENSUAMG00000014882	RBM4	97	98.551	ENSEASG00005005068	RBM4B	100	87.671	Equus_asinus_asinus
ENSUAMG00000014882	RBM4	100	98.082	ENSEASG00005005064	RBM4	100	98.082	Equus_asinus_asinus
ENSUAMG00000014882	RBM4	97	98.551	ENSECAG00000022987	RBM4B	100	87.397	Equus_caballus
ENSUAMG00000014882	RBM4	100	98.082	ENSECAG00000022940	RBM4	100	98.082	Equus_caballus
ENSUAMG00000014882	RBM4	97	99.275	ENSEEUG00000000058	RBM4B	100	87.671	Erinaceus_europaeus
ENSUAMG00000014882	RBM4	97	98.551	ENSFCAG00000007394	RBM4B	97	98.551	Felis_catus
ENSUAMG00000014882	RBM4	100	100.000	ENSFCAG00000029651	RBM4	100	100.000	Felis_catus
ENSUAMG00000014882	RBM4	97	97.101	ENSFALG00000002073	-	100	67.925	Ficedula_albicollis
ENSUAMG00000014882	RBM4	99	92.366	ENSFDAG00000013661	-	96	92.366	Fukomys_damarensis
ENSUAMG00000014882	RBM4	97	98.551	ENSFDAG00000015530	RBM4B	100	87.397	Fukomys_damarensis
ENSUAMG00000014882	RBM4	100	99.301	ENSFDAG00000005447	RBM4	100	99.301	Fukomys_damarensis
ENSUAMG00000014882	RBM4	97	97.101	ENSGALG00000040489	-	84	97.101	Gallus_gallus
ENSUAMG00000014882	RBM4	97	97.101	ENSGALG00000037946	-	100	75.000	Gallus_gallus
ENSUAMG00000014882	RBM4	97	96.377	ENSGAGG00000008553	-	100	73.890	Gopherus_agassizii
ENSUAMG00000014882	RBM4	98	78.571	ENSGGOG00000043023	-	98	79.562	Gorilla_gorilla
ENSUAMG00000014882	RBM4	100	95.804	ENSGGOG00000011698	RBM4B	97	98.551	Gorilla_gorilla
ENSUAMG00000014882	RBM4	97	98.551	ENSHGLG00000016412	-	100	87.671	Heterocephalus_glaber_female
ENSUAMG00000014882	RBM4	97	65.942	ENSHGLG00000000117	-	95	65.753	Heterocephalus_glaber_female
ENSUAMG00000014882	RBM4	97	88.406	ENSHGLG00000002853	-	100	73.699	Heterocephalus_glaber_female
ENSUAMG00000014882	RBM4	100	98.601	ENSHGLG00000009991	RBM4	100	98.601	Heterocephalus_glaber_female
ENSUAMG00000014882	RBM4	100	98.601	ENSHGLG00100003854	RBM4	100	98.601	Heterocephalus_glaber_male
ENSUAMG00000014882	RBM4	97	88.406	ENSHGLG00100020033	-	100	74.785	Heterocephalus_glaber_male
ENSUAMG00000014882	RBM4	97	98.551	ENSHGLG00100003978	-	100	86.885	Heterocephalus_glaber_male
ENSUAMG00000014882	RBM4	97	98.551	ENSSTOG00000011226	RBM4B	100	87.671	Ictidomys_tridecemlineatus
ENSUAMG00000014882	RBM4	100	100.000	ENSSTOG00000022811	RBM4	100	100.000	Ictidomys_tridecemlineatus
ENSUAMG00000014882	RBM4	93	75.188	ENSJJAG00000003168	-	92	73.881	Jaculus_jaculus
ENSUAMG00000014882	RBM4	97	94.891	ENSJJAG00000020870	Rbm4b	100	83.836	Jaculus_jaculus
ENSUAMG00000014882	RBM4	97	98.551	ENSLAFG00000002285	RBM4B	100	84.932	Loxodonta_africana
ENSUAMG00000014882	RBM4	100	96.164	ENSLAFG00000028147	-	100	96.164	Loxodonta_africana
ENSUAMG00000014882	RBM4	100	96.503	ENSMFAG00000033927	RBM4B	97	98.551	Macaca_fascicularis
ENSUAMG00000014882	RBM4	97	98.551	ENSMNEG00000043371	RBM4B	97	98.551	Macaca_nemestrina
ENSUAMG00000014882	RBM4	100	96.503	ENSMLEG00000028563	RBM4B	97	98.551	Mandrillus_leucophaeus
ENSUAMG00000014882	RBM4	97	98.551	ENSMAUG00000017027	Rbm4b	100	84.658	Mesocricetus_auratus
ENSUAMG00000014882	RBM4	100	95.804	ENSMICG00000003817	-	100	95.804	Microcebus_murinus
ENSUAMG00000014882	RBM4	100	97.902	ENSMICG00000047975	-	99	97.902	Microcebus_murinus
ENSUAMG00000014882	RBM4	99	97.872	ENSMICG00000003820	RBM4B	97	98.551	Microcebus_murinus
ENSUAMG00000014882	RBM4	97	98.551	ENSMOCG00000001835	Rbm4b	100	85.479	Microtus_ochrogaster
ENSUAMG00000014882	RBM4	97	96.377	ENSMODG00000008056	-	100	91.576	Monodelphis_domestica
ENSUAMG00000014882	RBM4	100	98.601	MGP_CAROLIEiJ_G0022516	-	100	98.601	Mus_caroli
ENSUAMG00000014882	RBM4	99	68.120	MGP_CAROLIEiJ_G0022514	-	100	68.937	Mus_caroli
ENSUAMG00000014882	RBM4	97	98.551	MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.027	Mus_caroli
ENSUAMG00000014882	RBM4	100	95.804	ENSMUSG00000033760	Rbm4b	94	95.804	Mus_musculus
ENSUAMG00000014882	RBM4	100	98.601	ENSMUSG00000094936	Rbm4	100	98.837	Mus_musculus
ENSUAMG00000014882	RBM4	100	95.628	ENSMUSG00000096370	Gm21992	100	95.628	Mus_musculus
ENSUAMG00000014882	RBM4	100	98.601	MGP_PahariEiJ_G0014013	-	100	98.601	Mus_pahari
ENSUAMG00000014882	RBM4	97	98.551	MGP_PahariEiJ_G0014012	Rbm4b	100	85.479	Mus_pahari
ENSUAMG00000014882	RBM4	100	95.902	MGP_PahariEiJ_G0014011	-	100	95.902	Mus_pahari
ENSUAMG00000014882	RBM4	100	79.268	MGP_SPRETEiJ_G0023430	-	100	79.268	Mus_spretus
ENSUAMG00000014882	RBM4	100	79.268	MGP_SPRETEiJ_G0023428	-	94	79.268	Mus_spretus
ENSUAMG00000014882	RBM4	100	74.306	MGP_SPRETEiJ_G0023429	-	100	75.000	Mus_spretus
ENSUAMG00000014882	RBM4	97	98.551	ENSMPUG00000003450	RBM4B	100	88.219	Mustela_putorius_furo
ENSUAMG00000014882	RBM4	100	99.726	ENSMPUG00000003443	RBM4	100	99.726	Mustela_putorius_furo
ENSUAMG00000014882	RBM4	97	99.275	ENSMLUG00000004076	RBM4	95	97.245	Myotis_lucifugus
ENSUAMG00000014882	RBM4	97	98.551	ENSMLUG00000001290	RBM4B	100	85.753	Myotis_lucifugus
ENSUAMG00000014882	RBM4	97	98.551	ENSNGAG00000016292	Rbm4b	100	86.027	Nannospalax_galili
ENSUAMG00000014882	RBM4	100	95.804	ENSNLEG00000006213	RBM4B	97	98.551	Nomascus_leucogenys
ENSUAMG00000014882	RBM4	100	100.000	ENSNLEG00000035021	RBM4	100	100.000	Nomascus_leucogenys
ENSUAMG00000014882	RBM4	97	97.826	ENSMEUG00000001445	-	100	88.767	Notamacropus_eugenii
ENSUAMG00000014882	RBM4	62	86.784	ENSMEUG00000005739	-	100	86.784	Notamacropus_eugenii
ENSUAMG00000014882	RBM4	97	98.551	ENSOPRG00000009158	RBM4B	100	87.945	Ochotona_princeps
ENSUAMG00000014882	RBM4	100	98.630	ENSOPRG00000009149	RBM4	100	98.630	Ochotona_princeps
ENSUAMG00000014882	RBM4	96	86.861	ENSODEG00000001866	-	100	79.178	Octodon_degus
ENSUAMG00000014882	RBM4	100	97.203	ENSODEG00000020039	-	100	97.203	Octodon_degus
ENSUAMG00000014882	RBM4	97	99.275	ENSODEG00000017696	-	100	87.671	Octodon_degus
ENSUAMG00000014882	RBM4	100	76.923	ENSODEG00000006635	-	100	76.923	Octodon_degus
ENSUAMG00000014882	RBM4	100	95.804	ENSODEG00000019143	-	100	95.804	Octodon_degus
ENSUAMG00000014882	RBM4	97	98.551	ENSOANG00000011036	-	100	84.932	Ornithorhynchus_anatinus
ENSUAMG00000014882	RBM4	97	98.551	ENSOANG00000003143	-	84	78.630	Ornithorhynchus_anatinus
ENSUAMG00000014882	RBM4	97	98.551	ENSOCUG00000006695	LARK	100	87.671	Oryctolagus_cuniculus
ENSUAMG00000014882	RBM4	100	99.726	ENSOCUG00000004731	RBM4	100	99.726	Oryctolagus_cuniculus
ENSUAMG00000014882	RBM4	97	98.551	ENSOGAG00000015648	RBM4B	100	87.671	Otolemur_garnettii
ENSUAMG00000014882	RBM4	100	99.178	ENSOGAG00000015647	RBM4	100	99.178	Otolemur_garnettii
ENSUAMG00000014882	RBM4	97	100.000	ENSOARG00000007700	RBM4	100	94.247	Ovis_aries
ENSUAMG00000014882	RBM4	97	98.551	ENSOARG00000007759	RBM4B	100	88.493	Ovis_aries
ENSUAMG00000014882	RBM4	100	95.804	ENSPPAG00000015125	RBM4B	97	98.551	Pan_paniscus
ENSUAMG00000014882	RBM4	97	98.551	ENSPPRG00000003388	RBM4B	97	98.551	Panthera_pardus
ENSUAMG00000014882	RBM4	100	100.000	ENSPPRG00000003533	RBM4	100	100.000	Panthera_pardus
ENSUAMG00000014882	RBM4	100	99.301	ENSPTIG00000016180	RBM4	100	99.301	Panthera_tigris_altaica
ENSUAMG00000014882	RBM4	97	98.551	ENSPTIG00000015426	RBM4B	97	98.551	Panthera_tigris_altaica
ENSUAMG00000014882	RBM4	100	95.804	ENSPTRG00000003935	RBM4B	97	98.551	Pan_troglodytes
ENSUAMG00000014882	RBM4	97	98.551	ENSPANG00000020672	RBM4B	97	98.551	Papio_anubis
ENSUAMG00000014882	RBM4	97	95.652	ENSPSIG00000003477	-	95	77.397	Pelodiscus_sinensis
ENSUAMG00000014882	RBM4	97	95.652	ENSPSIG00000003430	-	100	73.670	Pelodiscus_sinensis
ENSUAMG00000014882	RBM4	97	98.551	ENSPEMG00000009144	Rbm4b	100	85.753	Peromyscus_maniculatus_bairdii
ENSUAMG00000014882	RBM4	97	98.551	ENSPPYG00000003010	RBM4B	100	87.397	Pongo_abelii
ENSUAMG00000014882	RBM4	100	98.082	ENSPPYG00000003012	RBM4	100	98.082	Pongo_abelii
ENSUAMG00000014882	RBM4	100	97.260	ENSPCAG00000003393	-	100	97.260	Procavia_capensis
ENSUAMG00000014882	RBM4	97	98.551	ENSPCOG00000027885	RBM4B	97	98.551	Propithecus_coquereli
ENSUAMG00000014882	RBM4	100	99.178	ENSPVAG00000010486	RBM4	100	99.178	Pteropus_vampyrus
ENSUAMG00000014882	RBM4	97	98.551	ENSPVAG00000010487	RBM4B	100	87.945	Pteropus_vampyrus
ENSUAMG00000014882	RBM4	97	98.551	ENSRNOG00000061795	Rbm4b	100	86.301	Rattus_norvegicus
ENSUAMG00000014882	RBM4	100	98.601	ENSRNOG00000050741	Rbm4	100	98.601	Rattus_norvegicus
ENSUAMG00000014882	RBM4	97	98.551	ENSRBIG00000019394	RBM4B	97	98.551	Rhinopithecus_bieti
ENSUAMG00000014882	RBM4	97	98.551	ENSRROG00000032850	RBM4B	97	98.551	Rhinopithecus_roxellana
ENSUAMG00000014882	RBM4	97	100.000	ENSRROG00000032796	-	90	100.000	Rhinopithecus_roxellana
ENSUAMG00000014882	RBM4	97	97.826	ENSSBOG00000034474	RBM4B	97	97.826	Saimiri_boliviensis_boliviensis
ENSUAMG00000014882	RBM4	97	98.551	ENSSHAG00000008386	-	100	86.849	Sarcophilus_harrisii
ENSUAMG00000014882	RBM4	97	98.551	ENSSARG00000010710	RBM4B	100	87.945	Sorex_araneus
ENSUAMG00000014882	RBM4	100	100.000	ENSSSCG00000032437	RBM4	100	100.000	Sus_scrofa
ENSUAMG00000014882	RBM4	97	96.377	ENSTGUG00000016779	-	94	78.125	Taeniopygia_guttata
ENSUAMG00000014882	RBM4	97	98.551	ENSTBEG00000003748	RBM4B	100	86.027	Tupaia_belangeri
ENSUAMG00000014882	RBM4	96	100.000	ENSTBEG00000003727	-	70	99.545	Tupaia_belangeri
ENSUAMG00000014882	RBM4	100	98.082	ENSTTRG00000011164	RBM4	100	98.082	Tursiops_truncatus
ENSUAMG00000014882	RBM4	97	97.826	ENSTTRG00000011166	RBM4B	100	87.671	Tursiops_truncatus
ENSUAMG00000014882	RBM4	100	99.301	ENSUMAG00000011738	-	100	99.301	Ursus_maritimus
ENSUAMG00000014882	RBM4	97	97.826	ENSVPAG00000001950	RBM4B	100	87.671	Vicugna_pacos
ENSUAMG00000014882	RBM4	100	97.534	ENSVPAG00000001949	RBM4	100	97.534	Vicugna_pacos
ENSUAMG00000014882	RBM4	100	99.452	ENSVVUG00000010622	RBM4	100	99.452	Vulpes_vulpes
ENSUAMG00000014882	RBM4	99	89.362	ENSVVUG00000011717	-	96	89.362	Vulpes_vulpes
ENSUAMG00000014882	RBM4	97	98.551	ENSVVUG00000010619	RBM4B	100	87.671	Vulpes_vulpes