EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000015014 (Gene tree)
Gene ID: -
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 19894 bases
Position: chrLZNR01008445.1:10015-29908
Accession: 13071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000018975	zf-C2H2	PF00096.26	3.5e-21	1	4
ENSUAMP00000018975	zf-C2H2	PF00096.26	3.5e-21	2	4
ENSUAMP00000018975	zf-C2H2	PF00096.26	3.5e-21	3	4
ENSUAMP00000018975	zf-C2H2	PF00096.26	3.5e-21	4	4
ENSUAMP00000018974	zf-C2H2	PF00096.26	5e-20	1	4
ENSUAMP00000018974	zf-C2H2	PF00096.26	5e-20	2	4
ENSUAMP00000018974	zf-C2H2	PF00096.26	5e-20	3	4
ENSUAMP00000018974	zf-C2H2	PF00096.26	5e-20	4	4
ENSUAMP00000018975	zf-met	PF12874.7	3.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000021222	PATZ1-201	2461	-	ENSUAMP00000018974	641 (aa)	-	UPI00004BE6BB
ENSUAMT00000021223	PATZ1-202	2542	-	ENSUAMP00000018975	655 (aa)	-	-
ENSUAMT00000021224	PATZ1-203	1120	-	ENSUAMP00000018976	160 (aa)	-	UPI000C2D84C5

Gene Model

Click here to download ENSUAMG00000015014's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000015014's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000015014	PATZ1	77	38.889	ENSUAMG00000009266	ZBTB14	57	38.889
ENSUAMG00000015014	PATZ1	59	39.823	ENSUAMG00000018004	ZBTB24	54	39.823
ENSUAMG00000015014	PATZ1	51	30.952	ENSUAMG00000024556	ZNF652	80	30.952
ENSUAMG00000015014	PATZ1	54	31.429	ENSUAMG00000027381	-	75	33.476
ENSUAMG00000015014	PATZ1	57	32.597	ENSUAMG00000027384	-	90	33.529
ENSUAMG00000015014	PATZ1	52	30.337	ENSUAMG00000028270	-	90	32.673
ENSUAMG00000015014	PATZ1	76	31.288	ENSUAMG00000008413	ZBTB47	57	39.024
ENSUAMG00000015014	PATZ1	51	38.636	ENSUAMG00000012111	ZFP64	63	35.811
ENSUAMG00000015014	PATZ1	54	33.891	ENSUAMG00000013694	ZNF234	92	36.723
ENSUAMG00000015014	PATZ1	54	30.769	ENSUAMG00000005458	ZNF235	74	33.200
ENSUAMG00000015014	PATZ1	50	31.604	ENSUAMG00000016706	-	65	36.747
ENSUAMG00000015014	PATZ1	51	32.174	ENSUAMG00000026246	ZNF454	87	35.714
ENSUAMG00000015014	PATZ1	53	31.953	ENSUAMG00000009994	PRDM5	67	33.010
ENSUAMG00000015014	PATZ1	55	32.143	ENSUAMG00000014969	ZNF112	56	34.764
ENSUAMG00000015014	PATZ1	88	32.618	ENSUAMG00000019322	MYNN	91	32.618
ENSUAMG00000015014	PATZ1	50	33.557	ENSUAMG00000017632	ZFP1	63	34.118
ENSUAMG00000015014	PATZ1	50	31.122	ENSUAMG00000016827	ZNF319	79	31.122
ENSUAMG00000015014	PATZ1	53	32.948	ENSUAMG00000014479	ZNF317	66	33.742

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000015014	PATZ1	100	99.376	ENSG00000100105	PATZ1	100	99.376	Homo_sapiens
ENSUAMG00000015014	PATZ1	99	59.847	ENSAPOG00000018447	patz1	100	57.331	Acanthochromis_polyacanthus
ENSUAMG00000015014	PATZ1	100	93.159	ENSAMEG00000007074	PATZ1	100	93.159	Ailuropoda_melanoleuca
ENSUAMG00000015014	PATZ1	100	60.232	ENSACIG00000016779	patz1	100	59.961	Amphilophus_citrinellus
ENSUAMG00000015014	PATZ1	100	57.185	ENSAPEG00000013354	patz1	100	57.331	Amphiprion_percula
ENSUAMG00000015014	PATZ1	100	62.353	ENSATEG00000011260	patz1	100	62.157	Anabas_testudineus
ENSUAMG00000015014	PATZ1	84	84.589	ENSAPLG00000003934	PATZ1	99	83.562	Anas_platyrhynchos
ENSUAMG00000015014	PATZ1	100	99.376	ENSANAG00000029603	PATZ1	100	99.376	Aotus_nancymaae
ENSUAMG00000015014	PATZ1	97	62.222	ENSAMXG00000002273	patz1	98	56.472	Astyanax_mexicanus
ENSUAMG00000015014	PATZ1	100	99.844	ENSBTAG00000005478	PATZ1	100	99.844	Bos_taurus
ENSUAMG00000015014	PATZ1	100	99.376	ENSCJAG00000010978	PATZ1	100	99.376	Callithrix_jacchus
ENSUAMG00000015014	PATZ1	100	100.000	ENSCAFG00000013087	PATZ1	99	100.000	Canis_familiaris
ENSUAMG00000015014	PATZ1	100	99.376	ENSCHIG00000020203	PATZ1	100	99.376	Capra_hircus
ENSUAMG00000015014	PATZ1	100	99.220	ENSTSYG00000033183	PATZ1	100	99.220	Carlito_syrichta
ENSUAMG00000015014	PATZ1	100	99.376	ENSCCAG00000028772	PATZ1	100	99.376	Cebus_capucinus
ENSUAMG00000015014	PATZ1	100	99.376	ENSCATG00000006101	PATZ1	100	99.376	Cercocebus_atys
ENSUAMG00000015014	PATZ1	100	85.629	ENSCPBG00000011277	PATZ1	100	84.581	Chrysemys_picta_bellii
ENSUAMG00000015014	PATZ1	100	99.376	ENSCANG00000024972	PATZ1	100	99.376	Colobus_angolensis_palliatus
ENSUAMG00000015014	PATZ1	100	97.036	ENSCGRG00001004071	Patz1	100	97.036	Cricetulus_griseus_chok1gshd
ENSUAMG00000015014	PATZ1	93	97.822	ENSCGRG00000004814	Patz1	100	97.822	Cricetulus_griseus_crigri
ENSUAMG00000015014	PATZ1	100	52.841	ENSCSEG00000001385	patz1	100	52.916	Cynoglossus_semilaevis
ENSUAMG00000015014	PATZ1	100	58.997	ENSCVAG00000007684	patz1	100	58.789	Cyprinodon_variegatus
ENSUAMG00000015014	PATZ1	97	60.679	ENSDARG00000076584	patz1	98	58.967	Danio_rerio
ENSUAMG00000015014	PATZ1	84	99.270	ENSDNOG00000003183	PATZ1	100	91.922	Dasypus_novemcinctus
ENSUAMG00000015014	PATZ1	100	99.688	ENSDORG00000023834	Patz1	100	99.688	Dipodomys_ordii
ENSUAMG00000015014	PATZ1	100	99.532	ENSECAG00000025030	PATZ1	100	99.532	Equus_caballus
ENSUAMG00000015014	PATZ1	99	62.075	ENSELUG00000002333	patz1	100	58.166	Esox_lucius
ENSUAMG00000015014	PATZ1	100	100.000	ENSFCAG00000030253	PATZ1	100	100.000	Felis_catus
ENSUAMG00000015014	PATZ1	85	84.746	ENSFALG00000007450	PATZ1	99	83.816	Ficedula_albicollis
ENSUAMG00000015014	PATZ1	96	88.235	ENSFDAG00000005614	PATZ1	100	85.973	Fukomys_damarensis
ENSUAMG00000015014	PATZ1	100	57.625	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSUAMG00000015014	PATZ1	98	52.778	ENSGMOG00000001062	patz1	98	52.580	Gadus_morhua
ENSUAMG00000015014	PATZ1	100	82.734	ENSGALG00000006934	PATZ1	100	82.014	Gallus_gallus
ENSUAMG00000015014	PATZ1	100	58.721	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSUAMG00000015014	PATZ1	84	87.879	ENSGAGG00000003214	PATZ1	100	86.809	Gopherus_agassizii
ENSUAMG00000015014	PATZ1	100	99.532	ENSGGOG00000017171	PATZ1	100	99.532	Gorilla_gorilla
ENSUAMG00000015014	PATZ1	98	62.846	ENSHCOG00000017644	patz1	93	57.988	Hippocampus_comes
ENSUAMG00000015014	PATZ1	97	60.285	ENSIPUG00000017653	patz1	97	59.756	Ictalurus_punctatus
ENSUAMG00000015014	PATZ1	100	99.688	ENSSTOG00000020707	PATZ1	100	99.688	Ictidomys_tridecemlineatus
ENSUAMG00000015014	PATZ1	100	96.605	ENSJJAG00000015259	Patz1	100	96.605	Jaculus_jaculus
ENSUAMG00000015014	PATZ1	100	56.573	ENSKMAG00000008157	patz1	100	56.535	Kryptolebias_marmoratus
ENSUAMG00000015014	PATZ1	100	92.576	ENSLAFG00000002317	PATZ1	100	92.576	Loxodonta_africana
ENSUAMG00000015014	PATZ1	100	99.220	ENSMFAG00000040968	PATZ1	100	99.220	Macaca_fascicularis
ENSUAMG00000015014	PATZ1	100	99.220	ENSMNEG00000037588	PATZ1	100	99.220	Macaca_nemestrina
ENSUAMG00000015014	PATZ1	100	99.376	ENSMLEG00000030938	PATZ1	100	99.376	Mandrillus_leucophaeus
ENSUAMG00000015014	PATZ1	100	57.478	ENSMAMG00000023652	patz1	100	57.625	Mastacembelus_armatus
ENSUAMG00000015014	PATZ1	84	80.855	ENSMGAG00000008439	PATZ1	100	79.829	Meleagris_gallopavo
ENSUAMG00000015014	PATZ1	100	98.908	ENSMAUG00000004129	Patz1	100	98.908	Mesocricetus_auratus
ENSUAMG00000015014	PATZ1	100	99.220	ENSMICG00000005430	PATZ1	100	99.220	Microcebus_murinus
ENSUAMG00000015014	PATZ1	100	98.752	ENSMOCG00000014488	Patz1	100	98.752	Microtus_ochrogaster
ENSUAMG00000015014	PATZ1	99	55.078	ENSMMOG00000021679	patz1	85	54.883	Mola_mola
ENSUAMG00000015014	PATZ1	100	56.278	ENSMALG00000021172	patz1	100	55.835	Monopterus_albus
ENSUAMG00000015014	PATZ1	100	98.752	MGP_CAROLIEiJ_G0016007	Patz1	100	98.752	Mus_caroli
ENSUAMG00000015014	PATZ1	100	98.908	ENSMUSG00000020453	Patz1	100	98.908	Mus_musculus
ENSUAMG00000015014	PATZ1	100	98.908	MGP_PahariEiJ_G0016884	Patz1	100	98.908	Mus_pahari
ENSUAMG00000015014	PATZ1	100	98.908	MGP_SPRETEiJ_G0016846	Patz1	100	98.908	Mus_spretus
ENSUAMG00000015014	PATZ1	100	99.688	ENSMLUG00000009942	PATZ1	100	99.688	Myotis_lucifugus
ENSUAMG00000015014	PATZ1	100	99.220	ENSNGAG00000010268	Patz1	100	99.220	Nannospalax_galili
ENSUAMG00000015014	PATZ1	100	60.039	ENSNBRG00000016032	patz1	100	59.768	Neolamprologus_brichardi
ENSUAMG00000015014	PATZ1	65	84.731	ENSMEUG00000016293	PATZ1	99	84.698	Notamacropus_eugenii
ENSUAMG00000015014	PATZ1	100	98.752	ENSODEG00000003589	PATZ1	100	98.752	Octodon_degus
ENSUAMG00000015014	PATZ1	100	58.772	ENSONIG00000004248	patz1	100	58.565	Oreochromis_niloticus
ENSUAMG00000015014	PATZ1	100	87.373	ENSOANG00000014654	PATZ1	100	87.663	Ornithorhynchus_anatinus
ENSUAMG00000015014	PATZ1	100	58.626	ENSORLG00020010937	patz1	100	58.473	Oryzias_latipes_hni
ENSUAMG00000015014	PATZ1	100	58.003	ENSORLG00015007396	patz1	100	57.856	Oryzias_latipes_hsok
ENSUAMG00000015014	PATZ1	100	57.312	ENSOMEG00000006636	patz1	100	57.312	Oryzias_melastigma
ENSUAMG00000015014	PATZ1	100	92.868	ENSOGAG00000027905	PATZ1	100	92.868	Otolemur_garnettii
ENSUAMG00000015014	PATZ1	100	99.532	ENSPPAG00000033227	PATZ1	100	99.532	Pan_paniscus
ENSUAMG00000015014	PATZ1	100	100.000	ENSPPRG00000001573	PATZ1	100	100.000	Panthera_pardus
ENSUAMG00000015014	PATZ1	85	92.243	ENSPTIG00000007937	PATZ1	91	92.243	Panthera_tigris_altaica
ENSUAMG00000015014	PATZ1	100	99.532	ENSPTRG00000014268	PATZ1	100	99.532	Pan_troglodytes
ENSUAMG00000015014	PATZ1	100	99.376	ENSPANG00000006821	PATZ1	98	99.376	Papio_anubis
ENSUAMG00000015014	PATZ1	100	62.313	ENSPKIG00000019584	patz1	100	61.754	Paramormyrops_kingsleyae
ENSUAMG00000015014	PATZ1	67	81.390	ENSPSIG00000016553	-	99	80.717	Pelodiscus_sinensis
ENSUAMG00000015014	PATZ1	55	96.286	ENSPSIG00000011562	-	100	96.286	Pelodiscus_sinensis
ENSUAMG00000015014	PATZ1	100	55.508	ENSPMGG00000010196	patz1	100	55.508	Periophthalmus_magnuspinnatus
ENSUAMG00000015014	PATZ1	100	98.908	ENSPEMG00000005321	Patz1	100	98.908	Peromyscus_maniculatus_bairdii
ENSUAMG00000015014	PATZ1	100	57.478	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSUAMG00000015014	PATZ1	100	57.562	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSUAMG00000015014	PATZ1	100	54.444	ENSPREG00000002440	patz1	100	54.583	Poecilia_reticulata
ENSUAMG00000015014	PATZ1	100	92.576	ENSPPYG00000011732	PATZ1	100	92.576	Pongo_abelii
ENSUAMG00000015014	PATZ1	100	99.064	ENSPCOG00000019729	PATZ1	100	99.064	Propithecus_coquereli
ENSUAMG00000015014	PATZ1	100	93.159	ENSPVAG00000001749	PATZ1	100	93.159	Pteropus_vampyrus
ENSUAMG00000015014	PATZ1	100	58.651	ENSPNYG00000013542	patz1	100	58.443	Pundamilia_nyererei
ENSUAMG00000015014	PATZ1	83	54.619	ENSPNAG00000017222	patz1	99	54.140	Pygocentrus_nattereri
ENSUAMG00000015014	PATZ1	100	99.376	ENSRBIG00000044231	PATZ1	100	99.376	Rhinopithecus_bieti
ENSUAMG00000015014	PATZ1	100	99.376	ENSRROG00000037155	PATZ1	100	99.376	Rhinopithecus_roxellana
ENSUAMG00000015014	PATZ1	100	99.376	ENSSBOG00000003894	PATZ1	100	99.376	Saimiri_boliviensis_boliviensis
ENSUAMG00000015014	PATZ1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSUAMG00000015014	PATZ1	100	83.407	ENSSPUG00000015298	PATZ1	100	82.526	Sphenodon_punctatus
ENSUAMG00000015014	PATZ1	84	99.440	ENSSSCG00000010027	PATZ1	100	99.440	Sus_scrofa
ENSUAMG00000015014	PATZ1	100	54.633	ENSTRUG00000015366	patz1	100	59.417	Takifugu_rubripes
ENSUAMG00000015014	PATZ1	100	93.159	ENSTTRG00000010279	PATZ1	100	93.159	Tursiops_truncatus
ENSUAMG00000015014	PATZ1	100	68.551	ENSXETG00000004190	patz1	100	67.826	Xenopus_tropicalis
ENSUAMG00000015014	PATZ1	100	57.856	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus