EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000015116 (Gene tree)
Gene ID: -
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 18895 bases
Position: chrLZNR01000676.1:167492-186386
Accession: 17040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000019312	Btz	PF09405.10	1.1e-23	1	1
ENSUAMP00000019306	Btz	PF09405.10	1.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000021589	CASC3-201	2115	-	ENSUAMP00000019306	704 (aa)	-	-
ENSUAMT00000021596	CASC3-202	1935	-	ENSUAMP00000019312	644 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000015116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000015116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000015116	CASC3	100	94.426	ENSG00000108349	CASC3	100	94.318	Homo_sapiens
ENSUAMG00000015116	CASC3	100	97.727	ENSAMEG00000007764	CASC3	100	97.727	Ailuropoda_melanoleuca
ENSUAMG00000015116	CASC3	76	51.391	ENSACIG00000000720	casc3	83	51.220	Amphilophus_citrinellus
ENSUAMG00000015116	CASC3	82	53.376	ENSAOCG00000016676	casc3	77	52.941	Amphiprion_ocellaris
ENSUAMG00000015116	CASC3	84	53.376	ENSAPEG00000006787	casc3	77	52.941	Amphiprion_percula
ENSUAMG00000015116	CASC3	80	54.077	ENSATEG00000017196	casc3	67	54.077	Anabas_testudineus
ENSUAMG00000015116	CASC3	91	71.933	ENSACAG00000002674	CASC3	99	67.077	Anolis_carolinensis
ENSUAMG00000015116	CASC3	72	97.642	ENSANAG00000031954	-	100	97.642	Aotus_nancymaae
ENSUAMG00000015116	CASC3	99	88.201	ENSANAG00000034820	-	99	82.930	Aotus_nancymaae
ENSUAMG00000015116	CASC3	81	54.517	ENSACLG00000016198	casc3	78	54.369	Astatotilapia_calliptera
ENSUAMG00000015116	CASC3	81	60.443	ENSAMXG00000032452	casc3	77	58.654	Astyanax_mexicanus
ENSUAMG00000015116	CASC3	100	96.393	ENSBTAG00000006250	CASC3	100	94.744	Bos_taurus
ENSUAMG00000015116	CASC3	100	94.098	ENSCJAG00000016032	CASC3	100	92.330	Callithrix_jacchus
ENSUAMG00000015116	CASC3	100	97.705	ENSCAFG00000016141	CASC3	100	97.159	Canis_familiaris
ENSUAMG00000015116	CASC3	100	99.672	ENSCAFG00020018882	CASC3	100	99.670	Canis_lupus_dingo
ENSUAMG00000015116	CASC3	100	94.318	ENSCHIG00000006338	CASC3	100	94.318	Capra_hircus
ENSUAMG00000015116	CASC3	100	93.805	ENSTSYG00000002975	CASC3	88	95.138	Carlito_syrichta
ENSUAMG00000015116	CASC3	86	92.627	ENSCAPG00000010514	CASC3	100	89.610	Cavia_aperea
ENSUAMG00000015116	CASC3	100	89.086	ENSCPOG00000015139	CASC3	100	88.210	Cavia_porcellus
ENSUAMG00000015116	CASC3	100	93.115	ENSCCAG00000033620	CASC3	100	92.908	Cebus_capucinus
ENSUAMG00000015116	CASC3	100	94.901	ENSCATG00000033593	CASC3	100	94.901	Cercocebus_atys
ENSUAMG00000015116	CASC3	100	90.820	ENSCLAG00000013730	CASC3	100	89.773	Chinchilla_lanigera
ENSUAMG00000015116	CASC3	100	94.468	ENSCSAG00000002777	CASC3	100	94.468	Chlorocebus_sabaeus
ENSUAMG00000015116	CASC3	99	74.162	ENSCPBG00000004750	CASC3	95	78.744	Chrysemys_picta_bellii
ENSUAMG00000015116	CASC3	100	94.468	ENSCANG00000008814	CASC3	100	94.468	Colobus_angolensis_palliatus
ENSUAMG00000015116	CASC3	100	94.754	ENSCGRG00001014706	Casc3	100	92.614	Cricetulus_griseus_chok1gshd
ENSUAMG00000015116	CASC3	100	92.035	ENSCGRG00000001952	Casc3	100	85.085	Cricetulus_griseus_crigri
ENSUAMG00000015116	CASC3	90	51.592	ENSCSEG00000010047	casc3	74	51.155	Cynoglossus_semilaevis
ENSUAMG00000015116	CASC3	90	55.418	ENSCVAG00000014935	casc3	77	55.627	Cyprinodon_variegatus
ENSUAMG00000015116	CASC3	89	58.599	ENSDARG00000029911	casc3	76	58.147	Danio_rerio
ENSUAMG00000015116	CASC3	100	96.066	ENSDNOG00000017249	CASC3	96	93.892	Dasypus_novemcinctus
ENSUAMG00000015116	CASC3	100	90.164	ENSETEG00000013720	CASC3	100	85.653	Echinops_telfairi
ENSUAMG00000015116	CASC3	99	36.925	ENSEBUG00000010654	casc3	98	36.111	Eptatretus_burgeri
ENSUAMG00000015116	CASC3	100	96.721	ENSEASG00005002909	CASC3	100	96.721	Equus_asinus_asinus
ENSUAMG00000015116	CASC3	100	95.597	ENSECAG00000019947	CASC3	88	95.597	Equus_caballus
ENSUAMG00000015116	CASC3	70	94.098	ENSEEUG00000014253	CASC3	100	89.864	Erinaceus_europaeus
ENSUAMG00000015116	CASC3	82	57.994	ENSELUG00000015093	casc3	70	57.655	Esox_lucius
ENSUAMG00000015116	CASC3	100	97.377	ENSFCAG00000014998	CASC3	100	97.017	Felis_catus
ENSUAMG00000015116	CASC3	85	81.735	ENSFALG00000000412	CASC3	97	73.968	Ficedula_albicollis
ENSUAMG00000015116	CASC3	93	91.085	ENSFDAG00000020696	CASC3	100	88.450	Fukomys_damarensis
ENSUAMG00000015116	CASC3	86	53.879	ENSFHEG00000015793	casc3	77	54.019	Fundulus_heteroclitus
ENSUAMG00000015116	CASC3	90	76.138	ENSGALG00000031813	CASC3	99	70.922	Gallus_gallus
ENSUAMG00000015116	CASC3	80	51.984	ENSGAFG00000017148	casc3	66	49.675	Gambusia_affinis
ENSUAMG00000015116	CASC3	86	80.466	ENSGAGG00000008432	CASC3	91	84.404	Gopherus_agassizii
ENSUAMG00000015116	CASC3	100	94.176	ENSGGOG00000005067	CASC3	100	94.176	Gorilla_gorilla
ENSUAMG00000015116	CASC3	81	54.517	ENSHBUG00000013155	casc3	78	54.369	Haplochromis_burtoni
ENSUAMG00000015116	CASC3	100	89.631	ENSHGLG00000012117	CASC3	100	89.631	Heterocephalus_glaber_female
ENSUAMG00000015116	CASC3	88	90.113	ENSHGLG00100002268	CASC3	99	90.113	Heterocephalus_glaber_male
ENSUAMG00000015116	CASC3	90	48.252	ENSHCOG00000002664	casc3	76	48.475	Hippocampus_comes
ENSUAMG00000015116	CASC3	98	47.280	ENSIPUG00000002679	casc3	99	46.018	Ictalurus_punctatus
ENSUAMG00000015116	CASC3	100	95.410	ENSSTOG00000006374	CASC3	100	93.182	Ictidomys_tridecemlineatus
ENSUAMG00000015116	CASC3	100	91.150	ENSJJAG00000023525	Casc3	100	90.496	Jaculus_jaculus
ENSUAMG00000015116	CASC3	62	79.787	ENSKMAG00000019507	casc3	81	49.825	Kryptolebias_marmoratus
ENSUAMG00000015116	CASC3	76	67.133	ENSLBEG00000005435	casc3	76	52.090	Labrus_bergylta
ENSUAMG00000015116	CASC3	84	67.568	ENSLACG00000013200	CASC3	86	69.677	Latimeria_chalumnae
ENSUAMG00000015116	CASC3	75	72.947	ENSLOCG00000013518	casc3	71	70.048	Lepisosteus_oculatus
ENSUAMG00000015116	CASC3	100	93.215	ENSLAFG00000000606	CASC3	100	92.898	Loxodonta_africana
ENSUAMG00000015116	CASC3	100	94.901	ENSMFAG00000041496	CASC3	100	94.901	Macaca_fascicularis
ENSUAMG00000015116	CASC3	100	94.759	ENSMMUG00000045187	CASC3	100	94.901	Macaca_mulatta
ENSUAMG00000015116	CASC3	88	95.146	ENSMLEG00000029049	CASC3	97	95.146	Mandrillus_leucophaeus
ENSUAMG00000015116	CASC3	83	51.765	ENSMAMG00000005235	casc3	69	54.118	Mastacembelus_armatus
ENSUAMG00000015116	CASC3	81	54.517	ENSMZEG00005003815	casc3	78	54.369	Maylandia_zebra
ENSUAMG00000015116	CASC3	86	75.987	ENSMGAG00000013247	CASC3	99	74.472	Meleagris_gallopavo
ENSUAMG00000015116	CASC3	68	95.050	ENSMAUG00000006023	Casc3	90	91.740	Mesocricetus_auratus
ENSUAMG00000015116	CASC3	100	93.215	ENSMICG00000003321	CASC3	100	92.908	Microcebus_murinus
ENSUAMG00000015116	CASC3	100	94.098	ENSMOCG00000013644	Casc3	100	90.483	Microtus_ochrogaster
ENSUAMG00000015116	CASC3	86	52.727	ENSMMOG00000014339	casc3	76	53.376	Mola_mola
ENSUAMG00000015116	CASC3	99	83.832	ENSMODG00000013044	CASC3	92	79.037	Monodelphis_domestica
ENSUAMG00000015116	CASC3	78	46.536	ENSMALG00000019771	casc3	83	48.859	Monopterus_albus
ENSUAMG00000015116	CASC3	100	91.803	MGP_CAROLIEiJ_G0017099	Casc3	100	90.341	Mus_caroli
ENSUAMG00000015116	CASC3	100	91.803	ENSMUSG00000078676	Casc3	100	89.631	Mus_musculus
ENSUAMG00000015116	CASC3	100	91.475	MGP_SPRETEiJ_G0017943	Casc3	100	89.631	Mus_spretus
ENSUAMG00000015116	CASC3	100	97.377	ENSMPUG00000014903	CASC3	100	96.449	Mustela_putorius_furo
ENSUAMG00000015116	CASC3	100	94.426	ENSMLUG00000010520	CASC3	100	92.493	Myotis_lucifugus
ENSUAMG00000015116	CASC3	99	93.770	ENSNGAG00000023121	Casc3	100	90.341	Nannospalax_galili
ENSUAMG00000015116	CASC3	100	94.426	ENSNLEG00000001598	CASC3	100	93.466	Nomascus_leucogenys
ENSUAMG00000015116	CASC3	83	92.593	ENSMEUG00000015662	CASC3	97	70.690	Notamacropus_eugenii
ENSUAMG00000015116	CASC3	73	89.669	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSUAMG00000015116	CASC3	100	88.967	ENSODEG00000017858	CASC3	100	89.250	Octodon_degus
ENSUAMG00000015116	CASC3	81	53.846	ENSONIG00000009337	casc3	99	45.184	Oreochromis_niloticus
ENSUAMG00000015116	CASC3	57	75.455	ENSOANG00000003499	-	82	69.360	Ornithorhynchus_anatinus
ENSUAMG00000015116	CASC3	100	94.426	ENSOCUG00000002954	CASC3	100	93.608	Oryctolagus_cuniculus
ENSUAMG00000015116	CASC3	83	53.205	ENSORLG00000023125	casc3	82	51.803	Oryzias_latipes
ENSUAMG00000015116	CASC3	100	94.754	ENSOGAG00000034486	CASC3	98	93.714	Otolemur_garnettii
ENSUAMG00000015116	CASC3	100	94.460	ENSOARG00000013239	CASC3	100	94.460	Ovis_aries
ENSUAMG00000015116	CASC3	100	94.754	ENSPPAG00000035069	CASC3	100	94.460	Pan_paniscus
ENSUAMG00000015116	CASC3	100	97.017	ENSPPRG00000023670	CASC3	100	97.017	Panthera_pardus
ENSUAMG00000015116	CASC3	91	96.238	ENSPTIG00000010891	CASC3	91	96.238	Panthera_tigris_altaica
ENSUAMG00000015116	CASC3	100	94.610	ENSPANG00000021708	CASC3	100	94.610	Papio_anubis
ENSUAMG00000015116	CASC3	97	56.374	ENSPKIG00000023186	casc3	77	58.654	Paramormyrops_kingsleyae
ENSUAMG00000015116	CASC3	100	93.770	ENSPEMG00000009774	Casc3	100	91.761	Peromyscus_maniculatus_bairdii
ENSUAMG00000015116	CASC3	100	80.878	ENSPCIG00000025678	CASC3	100	82.153	Phascolarctos_cinereus
ENSUAMG00000015116	CASC3	83	55.459	ENSPFOG00000017632	casc3	100	46.217	Poecilia_formosa
ENSUAMG00000015116	CASC3	89	52.157	ENSPLAG00000005268	casc3	77	54.693	Poecilia_latipinna
ENSUAMG00000015116	CASC3	68	47.239	ENSPMEG00000010299	casc3	79	47.780	Poecilia_mexicana
ENSUAMG00000015116	CASC3	71	67.143	ENSPREG00000011856	casc3	82	51.071	Poecilia_reticulata
ENSUAMG00000015116	CASC3	100	93.770	ENSPPYG00000008467	CASC3	100	92.756	Pongo_abelii
ENSUAMG00000015116	CASC3	100	93.805	ENSPCOG00000008183	CASC3	100	92.482	Propithecus_coquereli
ENSUAMG00000015116	CASC3	100	95.738	ENSPVAG00000008556	CASC3	100	94.886	Pteropus_vampyrus
ENSUAMG00000015116	CASC3	81	54.517	ENSPNYG00000011962	casc3	78	54.369	Pundamilia_nyererei
ENSUAMG00000015116	CASC3	86	60.127	ENSPNAG00000015928	casc3	79	58.333	Pygocentrus_nattereri
ENSUAMG00000015116	CASC3	100	91.770	ENSRNOG00000009716	Casc3	100	91.749	Rattus_norvegicus
ENSUAMG00000015116	CASC3	100	94.610	ENSRBIG00000033289	CASC3	100	94.468	Rhinopithecus_bieti
ENSUAMG00000015116	CASC3	100	94.610	ENSRROG00000022337	CASC3	100	94.610	Rhinopithecus_roxellana
ENSUAMG00000015116	CASC3	86	95.872	ENSSBOG00000031406	CASC3	98	94.013	Saimiri_boliviensis_boliviensis
ENSUAMG00000015116	CASC3	88	87.126	ENSSHAG00000013338	CASC3	100	83.123	Sarcophilus_harrisii
ENSUAMG00000015116	CASC3	90	61.199	ENSSFOG00015002645	casc3	70	59.936	Scleropages_formosus
ENSUAMG00000015116	CASC3	76	67.361	ENSSMAG00000016096	casc3	56	61.728	Scophthalmus_maximus
ENSUAMG00000015116	CASC3	84	51.587	ENSSDUG00000016893	casc3	95	42.643	Seriola_dumerili
ENSUAMG00000015116	CASC3	89	48.427	ENSSLDG00000020308	casc3	90	48.438	Seriola_lalandi_dorsalis
ENSUAMG00000015116	CASC3	83	91.740	ENSSARG00000010378	CASC3	98	82.828	Sorex_araneus
ENSUAMG00000015116	CASC3	81	53.994	ENSSPAG00000023008	casc3	77	52.941	Stegastes_partitus
ENSUAMG00000015116	CASC3	86	96.789	ENSSSCG00000017477	CASC3	97	94.165	Sus_scrofa
ENSUAMG00000015116	CASC3	74	74.621	ENSTGUG00000002300	CASC3	99	74.621	Taeniopygia_guttata
ENSUAMG00000015116	CASC3	80	55.702	ENSTRUG00000000673	casc3	76	51.447	Takifugu_rubripes
ENSUAMG00000015116	CASC3	72	97.642	ENSTBEG00000017459	CASC3	67	97.642	Tupaia_belangeri
ENSUAMG00000015116	CASC3	84	94.690	ENSTTRG00000016896	CASC3	98	85.185	Tursiops_truncatus
ENSUAMG00000015116	CASC3	88	99.190	ENSUMAG00000017697	CASC3	100	99.410	Ursus_maritimus
ENSUAMG00000015116	CASC3	75	99.160	ENSVPAG00000000799	CASC3	75	99.160	Vicugna_pacos
ENSUAMG00000015116	CASC3	100	97.705	ENSVVUG00000000997	CASC3	100	97.159	Vulpes_vulpes
ENSUAMG00000015116	CASC3	89	59.184	ENSXETG00000024395	casc3	98	57.003	Xenopus_tropicalis
ENSUAMG00000015116	CASC3	75	64.881	ENSXMAG00000013937	casc3	77	52.716	Xiphophorus_maculatus