EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000015644 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 12275 bases
Position: chrLZNR01003796.1:995-13269
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000019791	RRM_4	PF10598.9	2.1e-48	1	1
ENSUAMP00000019789	RRM_4	PF10598.9	2.1e-48	1	1
ENSUAMP00000019788	RRM_4	PF10598.9	2.1e-48	1	1
ENSUAMP00000019791	U5_2-snRNA_bdg	PF10597.9	4e-17	1	1
ENSUAMP00000019789	U5_2-snRNA_bdg	PF10597.9	4.1e-17	1	1
ENSUAMP00000019788	U5_2-snRNA_bdg	PF10597.9	4.1e-17	1	1
ENSUAMP00000019791	PRO8NT	PF08082.11	6.8e-87	1	1
ENSUAMP00000019789	PRO8NT	PF08082.11	7e-87	1	1
ENSUAMP00000019788	PRO8NT	PF08082.11	7e-87	1	1
ENSUAMP00000019791	PROCN	PF08083.11	7.3e-236	1	1
ENSUAMP00000019789	PROCN	PF08083.11	7.5e-236	1	1
ENSUAMP00000019788	PROCN	PF08083.11	7.5e-236	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000022144	-	4005	-	ENSUAMP00000019789	1334 (aa)	-	-
ENSUAMT00000022146	-	4102	-	ENSUAMP00000019791	1318 (aa)	-	-
ENSUAMT00000022143	-	4017	-	ENSUAMP00000019788	1338 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000015644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000015644's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000015644	-	96	99.921	ENSG00000174231	PRPF8	100	94.752	Homo_sapiens
ENSUAMG00000015644	-	96	96.675	ENSAPOG00000010079	prpf8	54	96.675	Acanthochromis_polyacanthus
ENSUAMG00000015644	-	96	99.921	ENSAMEG00000007940	PRPF8	54	99.921	Ailuropoda_melanoleuca
ENSUAMG00000015644	-	96	96.000	ENSACIG00000018280	prpf8	55	95.479	Amphilophus_citrinellus
ENSUAMG00000015644	-	96	96.675	ENSAOCG00000010725	prpf8	54	96.675	Amphiprion_ocellaris
ENSUAMG00000015644	-	96	96.675	ENSAPEG00000014397	prpf8	54	96.675	Amphiprion_percula
ENSUAMG00000015644	-	96	96.672	ENSATEG00000010062	prpf8	54	96.672	Anabas_testudineus
ENSUAMG00000015644	-	89	98.644	ENSAPLG00000010357	PRPF8	52	98.644	Anas_platyrhynchos
ENSUAMG00000015644	-	95	98.573	ENSACAG00000014784	PRPF8	65	98.573	Anolis_carolinensis
ENSUAMG00000015644	-	96	99.921	ENSANAG00000032629	PRPF8	54	99.921	Aotus_nancymaae
ENSUAMG00000015644	-	96	96.075	ENSACLG00000020858	prpf8	53	97.083	Astatotilapia_calliptera
ENSUAMG00000015644	-	96	96.587	ENSAMXG00000020291	prpf8	54	96.587	Astyanax_mexicanus
ENSUAMG00000015644	-	96	99.921	ENSBTAG00000011488	PRPF8	54	99.921	Bos_taurus
ENSUAMG00000015644	-	95	85.235	WBGene00004187	prp-8	56	82.706	Caenorhabditis_elegans
ENSUAMG00000015644	-	96	99.921	ENSCJAG00000001911	PRPF8	54	99.921	Callithrix_jacchus
ENSUAMG00000015644	-	96	99.921	ENSCAFG00000019221	PRPF8	54	99.921	Canis_familiaris
ENSUAMG00000015644	-	89	99.318	ENSCAFG00020009943	PRPF8	52	99.318	Canis_lupus_dingo
ENSUAMG00000015644	-	96	99.921	ENSCHIG00000017499	PRPF8	54	99.921	Capra_hircus
ENSUAMG00000015644	-	96	99.921	ENSTSYG00000014120	PRPF8	54	99.921	Carlito_syrichta
ENSUAMG00000015644	-	89	99.320	ENSCAPG00000009459	PRPF8	52	99.320	Cavia_aperea
ENSUAMG00000015644	-	96	99.921	ENSCPOG00000010379	PRPF8	54	99.921	Cavia_porcellus
ENSUAMG00000015644	-	96	99.921	ENSCCAG00000031983	-	54	99.921	Cebus_capucinus
ENSUAMG00000015644	-	96	99.921	ENSCATG00000038595	PRPF8	54	99.921	Cercocebus_atys
ENSUAMG00000015644	-	96	99.921	ENSCLAG00000004388	PRPF8	54	99.921	Chinchilla_lanigera
ENSUAMG00000015644	-	96	99.921	ENSCSAG00000013929	PRPF8	54	99.921	Chlorocebus_sabaeus
ENSUAMG00000015644	-	82	99.738	ENSCHOG00000008590	PRPF8	53	99.738	Choloepus_hoffmanni
ENSUAMG00000015644	-	96	99.206	ENSCPBG00000020409	PRPF8	54	99.206	Chrysemys_picta_bellii
ENSUAMG00000015644	-	93	92.544	ENSCSAVG00000007825	-	52	92.874	Ciona_savignyi
ENSUAMG00000015644	-	96	99.921	ENSCANG00000043088	PRPF8	54	99.921	Colobus_angolensis_palliatus
ENSUAMG00000015644	-	77	100.000	ENSCGRG00001017673	-	98	100.000	Cricetulus_griseus_chok1gshd
ENSUAMG00000015644	-	75	98.679	ENSCGRG00000005129	Prpf8	58	98.679	Cricetulus_griseus_crigri
ENSUAMG00000015644	-	96	96.516	ENSCSEG00000007905	prpf8	54	96.516	Cynoglossus_semilaevis
ENSUAMG00000015644	-	96	96.445	ENSDARG00000026180	prpf8	54	96.445	Danio_rerio
ENSUAMG00000015644	-	96	99.921	ENSDNOG00000018471	PRPF8	58	99.921	Dasypus_novemcinctus
ENSUAMG00000015644	-	96	99.290	ENSDORG00000006185	Prpf8	64	99.290	Dipodomys_ordii
ENSUAMG00000015644	-	96	88.669	FBgn0033688	Prp8	53	88.389	Drosophila_melanogaster
ENSUAMG00000015644	-	96	95.552	ENSETEG00000017592	PRPF8	54	95.552	Echinops_telfairi
ENSUAMG00000015644	-	94	91.579	ENSEBUG00000006548	prpf8	53	90.895	Eptatretus_burgeri
ENSUAMG00000015644	-	96	99.921	ENSEASG00005009514	PRPF8	75	99.369	Equus_asinus_asinus
ENSUAMG00000015644	-	92	99.337	ENSECAG00000021318	PRPF8	53	99.337	Equus_caballus
ENSUAMG00000015644	-	96	96.593	ENSELUG00000007120	prpf8	56	96.063	Esox_lucius
ENSUAMG00000015644	-	96	99.921	ENSFCAG00000006297	PRPF8	54	99.921	Felis_catus
ENSUAMG00000015644	-	96	98.579	ENSFALG00000006628	PRPF8	54	98.579	Ficedula_albicollis
ENSUAMG00000015644	-	96	99.921	ENSFDAG00000004711	PRPF8	54	99.921	Fukomys_damarensis
ENSUAMG00000015644	-	96	96.288	ENSFHEG00000021084	prpf8	54	96.288	Fundulus_heteroclitus
ENSUAMG00000015644	-	95	96.397	ENSGMOG00000002028	prpf8	54	96.197	Gadus_morhua
ENSUAMG00000015644	-	96	98.500	ENSGALG00000002943	PRPF8	54	98.500	Gallus_gallus
ENSUAMG00000015644	-	95	96.358	ENSGAFG00000010337	prpf8	54	96.358	Gambusia_affinis
ENSUAMG00000015644	-	96	96.187	ENSGACG00000008504	prpf8	54	96.187	Gasterosteus_aculeatus
ENSUAMG00000015644	-	96	99.206	ENSGAGG00000008350	PRPF8	54	99.206	Gopherus_agassizii
ENSUAMG00000015644	-	96	99.921	ENSGGOG00000005516	PRPF8	54	99.921	Gorilla_gorilla
ENSUAMG00000015644	-	96	96.352	ENSHBUG00000016192	prpf8	54	96.352	Haplochromis_burtoni
ENSUAMG00000015644	-	96	99.921	ENSHGLG00000012029	PRPF8	54	99.921	Heterocephalus_glaber_female
ENSUAMG00000015644	-	96	99.921	ENSHGLG00100016494	PRPF8	54	99.921	Heterocephalus_glaber_male
ENSUAMG00000015644	-	96	96.437	ENSHCOG00000016414	prpf8	54	96.437	Hippocampus_comes
ENSUAMG00000015644	-	96	96.276	ENSIPUG00000023230	prpf8	54	96.276	Ictalurus_punctatus
ENSUAMG00000015644	-	96	99.921	ENSSTOG00000005128	PRPF8	54	99.921	Ictidomys_tridecemlineatus
ENSUAMG00000015644	-	96	99.369	ENSJJAG00000021159	Prpf8	55	99.369	Jaculus_jaculus
ENSUAMG00000015644	-	95	97.193	ENSKMAG00000016118	prpf8	53	97.193	Kryptolebias_marmoratus
ENSUAMG00000015644	-	96	96.279	ENSLBEG00000026903	prpf8	54	96.279	Labrus_bergylta
ENSUAMG00000015644	-	96	93.487	ENSLACG00000010479	PRPF8	54	96.967	Latimeria_chalumnae
ENSUAMG00000015644	-	95	96.743	ENSLOCG00000005409	prpf8	54	96.743	Lepisosteus_oculatus
ENSUAMG00000015644	-	96	99.921	ENSLAFG00000015445	PRPF8	54	99.921	Loxodonta_africana
ENSUAMG00000015644	-	96	99.921	ENSMFAG00000039995	PRPF8	54	99.921	Macaca_fascicularis
ENSUAMG00000015644	-	96	99.921	ENSMMUG00000004820	PRPF8	54	99.921	Macaca_mulatta
ENSUAMG00000015644	-	96	99.921	ENSMNEG00000035713	PRPF8	54	99.921	Macaca_nemestrina
ENSUAMG00000015644	-	96	99.921	ENSMLEG00000037937	PRPF8	54	99.921	Mandrillus_leucophaeus
ENSUAMG00000015644	-	96	96.672	ENSMAMG00000008919	prpf8	54	96.672	Mastacembelus_armatus
ENSUAMG00000015644	-	96	96.075	ENSMZEG00005015073	prpf8	54	96.075	Maylandia_zebra
ENSUAMG00000015644	-	96	98.500	ENSMGAG00000004769	PRPF8	54	98.500	Meleagris_gallopavo
ENSUAMG00000015644	-	96	99.921	ENSMICG00000010320	PRPF8	99	99.584	Microcebus_murinus
ENSUAMG00000015644	-	96	99.921	ENSMOCG00000016838	Prpf8	54	99.921	Microtus_ochrogaster
ENSUAMG00000015644	-	96	95.800	ENSMMOG00000011887	prpf8	54	95.800	Mola_mola
ENSUAMG00000015644	-	96	99.290	ENSMODG00000010480	PRPF8	54	99.290	Monodelphis_domestica
ENSUAMG00000015644	-	89	94.177	ENSMALG00000003558	prpf8	53	94.177	Monopterus_albus
ENSUAMG00000015644	-	96	99.921	MGP_CAROLIEiJ_G0016740	Prpf8	100	94.904	Mus_caroli
ENSUAMG00000015644	-	96	99.921	ENSMUSG00000020850	Prpf8	100	94.904	Mus_musculus
ENSUAMG00000015644	-	96	99.841	MGP_PahariEiJ_G0017877	Prpf8	100	94.813	Mus_pahari
ENSUAMG00000015644	-	96	99.921	MGP_SPRETEiJ_G0017583	Prpf8	100	94.904	Mus_spretus
ENSUAMG00000015644	-	96	99.921	ENSMPUG00000013227	PRPF8	54	99.921	Mustela_putorius_furo
ENSUAMG00000015644	-	96	99.841	ENSMLUG00000002666	PRPF8	54	99.841	Myotis_lucifugus
ENSUAMG00000015644	-	96	99.921	ENSNGAG00000005305	Prpf8	55	99.921	Nannospalax_galili
ENSUAMG00000015644	-	96	96.154	ENSNBRG00000013127	prpf8	54	96.154	Neolamprologus_brichardi
ENSUAMG00000015644	-	90	95.463	ENSNLEG00000000897	PRPF8	51	95.463	Nomascus_leucogenys
ENSUAMG00000015644	-	94	96.675	ENSMEUG00000015999	PRPF8	54	96.675	Notamacropus_eugenii
ENSUAMG00000015644	-	96	97.141	ENSOPRG00000003102	PRPF8	54	97.141	Ochotona_princeps
ENSUAMG00000015644	-	96	99.921	ENSODEG00000008468	PRPF8	54	99.921	Octodon_degus
ENSUAMG00000015644	-	96	96.157	ENSONIG00000008153	prpf8	54	96.157	Oreochromis_niloticus
ENSUAMG00000015644	-	96	99.921	ENSOCUG00000000081	PRPF8	54	99.921	Oryctolagus_cuniculus
ENSUAMG00000015644	-	95	96.585	ENSORLG00000008036	prpf8	54	96.585	Oryzias_latipes
ENSUAMG00000015644	-	95	96.585	ENSORLG00020021070	prpf8	53	96.585	Oryzias_latipes_hni
ENSUAMG00000015644	-	95	96.585	ENSORLG00015002340	prpf8	53	96.585	Oryzias_latipes_hsok
ENSUAMG00000015644	-	95	96.820	ENSOMEG00000016866	prpf8	54	96.820	Oryzias_melastigma
ENSUAMG00000015644	-	96	99.683	ENSOARG00000013312	PRPF8	54	99.683	Ovis_aries
ENSUAMG00000015644	-	96	99.921	ENSPPAG00000042753	PRPF8	54	99.921	Pan_paniscus
ENSUAMG00000015644	-	96	99.921	ENSPPRG00000008746	PRPF8	54	99.921	Panthera_pardus
ENSUAMG00000015644	-	96	99.762	ENSPTIG00000019200	PRPF8	54	99.762	Panthera_tigris_altaica
ENSUAMG00000015644	-	96	99.921	ENSPTRG00000039576	PRPF8	54	99.921	Pan_troglodytes
ENSUAMG00000015644	-	96	97.627	ENSPANG00000024607	PRPF8	95	93.732	Papio_anubis
ENSUAMG00000015644	-	96	95.840	ENSPKIG00000011201	prpf8	54	95.840	Paramormyrops_kingsleyae
ENSUAMG00000015644	-	96	99.126	ENSPSIG00000013393	PRPF8	54	99.126	Pelodiscus_sinensis
ENSUAMG00000015644	-	96	99.921	ENSPEMG00000021699	Prpf8	54	99.921	Peromyscus_maniculatus_bairdii
ENSUAMG00000015644	-	89	91.531	ENSPMAG00000005438	prpf8	52	91.617	Petromyzon_marinus
ENSUAMG00000015644	-	96	99.290	ENSPCIG00000022603	PRPF8	54	99.290	Phascolarctos_cinereus
ENSUAMG00000015644	-	96	95.401	ENSPFOG00000007005	prpf8	54	95.401	Poecilia_formosa
ENSUAMG00000015644	-	96	93.686	ENSPLAG00000020777	prpf8	54	94.281	Poecilia_latipinna
ENSUAMG00000015644	-	96	95.401	ENSPMEG00000004051	prpf8	54	95.401	Poecilia_mexicana
ENSUAMG00000015644	-	96	96.664	ENSPREG00000021902	prpf8	54	96.664	Poecilia_reticulata
ENSUAMG00000015644	-	96	99.921	ENSPPYG00000007777	PRPF8	54	99.921	Pongo_abelii
ENSUAMG00000015644	-	96	99.921	ENSPCOG00000015182	PRPF8	54	99.921	Propithecus_coquereli
ENSUAMG00000015644	-	90	100.000	ENSPVAG00000002134	PRPF8	51	100.000	Pteropus_vampyrus
ENSUAMG00000015644	-	96	96.352	ENSPNYG00000016356	prpf8	54	96.352	Pundamilia_nyererei
ENSUAMG00000015644	-	96	96.434	ENSPNAG00000009247	prpf8	54	96.434	Pygocentrus_nattereri
ENSUAMG00000015644	-	96	99.921	ENSRNOG00000003495	Prpf8	54	99.921	Rattus_norvegicus
ENSUAMG00000015644	-	96	99.921	ENSRBIG00000031219	PRPF8	54	99.921	Rhinopithecus_bieti
ENSUAMG00000015644	-	96	99.921	ENSRROG00000038014	PRPF8	54	99.921	Rhinopithecus_roxellana
ENSUAMG00000015644	-	94	61.371	YHR165C	PRP8	51	61.452	Saccharomyces_cerevisiae
ENSUAMG00000015644	-	96	99.921	ENSSBOG00000029717	PRPF8	54	99.921	Saimiri_boliviensis_boliviensis
ENSUAMG00000015644	-	96	99.290	ENSSHAG00000006167	PRPF8	54	99.290	Sarcophilus_harrisii
ENSUAMG00000015644	-	96	96.130	ENSSFOG00015013905	prpf8	54	96.130	Scleropages_formosus
ENSUAMG00000015644	-	96	95.354	ENSSMAG00000017736	prpf8	54	95.968	Scophthalmus_maximus
ENSUAMG00000015644	-	96	96.593	ENSSDUG00000003029	prpf8	54	96.593	Seriola_dumerili
ENSUAMG00000015644	-	96	98.421	ENSSPUG00000007463	PRPF8	54	98.421	Sphenodon_punctatus
ENSUAMG00000015644	-	96	94.646	ENSSPAG00000015639	prpf8	54	95.566	Stegastes_partitus
ENSUAMG00000015644	-	96	99.921	ENSSSCG00000017817	PRPF8	54	99.921	Sus_scrofa
ENSUAMG00000015644	-	96	98.579	ENSTGUG00000005648	-	54	98.579	Taeniopygia_guttata
ENSUAMG00000015644	-	72	98.104	ENSTGUG00000015597	-	74	98.104	Taeniopygia_guttata
ENSUAMG00000015644	-	96	96.437	ENSTRUG00000015906	prpf8	54	96.437	Takifugu_rubripes
ENSUAMG00000015644	-	86	98.328	ENSTNIG00000003460	prpf8	51	98.328	Tetraodon_nigroviridis
ENSUAMG00000015644	-	90	99.888	ENSTBEG00000006431	PRPF8	51	99.888	Tupaia_belangeri
ENSUAMG00000015644	-	96	99.762	ENSTTRG00000006869	PRPF8	54	99.762	Tursiops_truncatus
ENSUAMG00000015644	-	96	99.444	ENSUMAG00000009385	PRPF8	54	99.444	Ursus_maritimus
ENSUAMG00000015644	-	96	99.921	ENSVVUG00000021695	PRPF8	54	99.369	Vulpes_vulpes
ENSUAMG00000015644	-	96	98.173	ENSXETG00000022259	prpf8	54	98.173	Xenopus_tropicalis
ENSUAMG00000015644	-	96	96.445	ENSXCOG00000012775	prpf8	54	96.445	Xiphophorus_couchianus
ENSUAMG00000015644	-	96	96.445	ENSXMAG00000008505	prpf8	54	96.445	Xiphophorus_maculatus