EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000015783 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 17304 bases
Position: chrLZNR01010329.1:89678-106981
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000019976	CAF1	PF04857.20	4.8e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000022341	PNLDC1-201	1590	-	ENSUAMP00000019976	529 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000015783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000015783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000015783	PNLDC1	99	75.000	ENSG00000146453	PNLDC1	99	75.000	Homo_sapiens
ENSUAMG00000015783	PNLDC1	100	82.440	ENSAMEG00000015371	PNLDC1	100	82.440	Ailuropoda_melanoleuca
ENSUAMG00000015783	PNLDC1	95	50.288	ENSAPLG00000007014	PNLDC1	98	50.288	Anas_platyrhynchos
ENSUAMG00000015783	PNLDC1	99	51.128	ENSACAG00000013667	PNLDC1	98	50.954	Anolis_carolinensis
ENSUAMG00000015783	PNLDC1	99	73.519	ENSANAG00000034713	PNLDC1	100	73.704	Aotus_nancymaae
ENSUAMG00000015783	PNLDC1	95	76.209	ENSBTAG00000015166	PNLDC1	96	76.209	Bos_taurus
ENSUAMG00000015783	PNLDC1	99	73.148	ENSCJAG00000011865	PNLDC1	99	73.148	Callithrix_jacchus
ENSUAMG00000015783	PNLDC1	99	82.407	ENSCAFG00000000740	PNLDC1	99	82.407	Canis_familiaris
ENSUAMG00000015783	PNLDC1	99	83.519	ENSCAFG00020017742	PNLDC1	99	83.519	Canis_lupus_dingo
ENSUAMG00000015783	PNLDC1	99	77.407	ENSCHIG00000003141	PNLDC1	99	77.407	Capra_hircus
ENSUAMG00000015783	PNLDC1	99	73.704	ENSTSYG00000005606	PNLDC1	99	73.704	Carlito_syrichta
ENSUAMG00000015783	PNLDC1	99	50.844	ENSCAPG00000011893	PNLDC1	99	50.844	Cavia_aperea
ENSUAMG00000015783	PNLDC1	99	66.481	ENSCPOG00000019565	PNLDC1	99	66.481	Cavia_porcellus
ENSUAMG00000015783	PNLDC1	99	73.704	ENSCCAG00000026232	PNLDC1	99	73.704	Cebus_capucinus
ENSUAMG00000015783	PNLDC1	99	74.259	ENSCATG00000033196	PNLDC1	99	74.259	Cercocebus_atys
ENSUAMG00000015783	PNLDC1	99	72.097	ENSCLAG00000003228	PNLDC1	99	72.097	Chinchilla_lanigera
ENSUAMG00000015783	PNLDC1	97	73.614	ENSCSAG00000012478	PNLDC1	99	73.614	Chlorocebus_sabaeus
ENSUAMG00000015783	PNLDC1	96	55.577	ENSCPBG00000004050	PNLDC1	100	55.449	Chrysemys_picta_bellii
ENSUAMG00000015783	PNLDC1	95	73.786	ENSCANG00000043076	PNLDC1	97	73.786	Colobus_angolensis_palliatus
ENSUAMG00000015783	PNLDC1	99	68.030	ENSCGRG00001007470	-	99	68.030	Cricetulus_griseus_chok1gshd
ENSUAMG00000015783	PNLDC1	99	55.453	ENSCGRG00001011981	-	99	55.453	Cricetulus_griseus_chok1gshd
ENSUAMG00000015783	PNLDC1	99	58.226	ENSCGRG00000003103	-	99	58.226	Cricetulus_griseus_crigri
ENSUAMG00000015783	PNLDC1	99	68.030	ENSCGRG00000010221	-	99	68.030	Cricetulus_griseus_crigri
ENSUAMG00000015783	PNLDC1	99	74.440	ENSDNOG00000013709	PNLDC1	99	74.440	Dasypus_novemcinctus
ENSUAMG00000015783	PNLDC1	99	69.832	ENSDORG00000011517	Pnldc1	99	79.032	Dipodomys_ordii
ENSUAMG00000015783	PNLDC1	93	63.817	ENSETEG00000007587	PNLDC1	99	63.817	Echinops_telfairi
ENSUAMG00000015783	PNLDC1	99	74.907	ENSEASG00005019029	PNLDC1	99	74.907	Equus_asinus_asinus
ENSUAMG00000015783	PNLDC1	99	78.333	ENSECAG00000012898	PNLDC1	99	78.333	Equus_caballus
ENSUAMG00000015783	PNLDC1	66	87.500	ENSEEUG00000005717	-	82	87.500	Erinaceus_europaeus
ENSUAMG00000015783	PNLDC1	99	79.963	ENSFCAG00000002848	PNLDC1	99	79.963	Felis_catus
ENSUAMG00000015783	PNLDC1	94	48.828	ENSFALG00000012081	PNLDC1	99	48.828	Ficedula_albicollis
ENSUAMG00000015783	PNLDC1	99	71.429	ENSFDAG00000021334	PNLDC1	98	71.375	Fukomys_damarensis
ENSUAMG00000015783	PNLDC1	79	48.605	ENSGALG00000011624	PNLDC1	82	48.605	Gallus_gallus
ENSUAMG00000015783	PNLDC1	99	56.089	ENSGAGG00000015276	PNLDC1	100	56.274	Gopherus_agassizii
ENSUAMG00000015783	PNLDC1	99	74.815	ENSGGOG00000014077	PNLDC1	99	74.815	Gorilla_gorilla
ENSUAMG00000015783	PNLDC1	99	72.643	ENSHGLG00000006889	PNLDC1	99	72.643	Heterocephalus_glaber_female
ENSUAMG00000015783	PNLDC1	99	72.643	ENSHGLG00100018275	PNLDC1	99	72.643	Heterocephalus_glaber_male
ENSUAMG00000015783	PNLDC1	99	76.766	ENSSTOG00000005595	PNLDC1	99	76.766	Ictidomys_tridecemlineatus
ENSUAMG00000015783	PNLDC1	99	66.111	ENSJJAG00000009937	Pnldc1	99	66.111	Jaculus_jaculus
ENSUAMG00000015783	PNLDC1	60	74.455	ENSLAFG00000030189	PNLDC1	94	74.455	Loxodonta_africana
ENSUAMG00000015783	PNLDC1	99	74.815	ENSMFAG00000041296	PNLDC1	99	74.815	Macaca_fascicularis
ENSUAMG00000015783	PNLDC1	99	74.815	ENSMMUG00000004181	PNLDC1	99	74.815	Macaca_mulatta
ENSUAMG00000015783	PNLDC1	99	74.630	ENSMNEG00000034271	PNLDC1	99	74.630	Macaca_nemestrina
ENSUAMG00000015783	PNLDC1	99	71.667	ENSMLEG00000044059	PNLDC1	99	71.667	Mandrillus_leucophaeus
ENSUAMG00000015783	PNLDC1	95	49.709	ENSMGAG00000012470	PNLDC1	97	49.709	Meleagris_gallopavo
ENSUAMG00000015783	PNLDC1	99	57.815	ENSMAUG00000012298	Pnldc1	100	57.815	Mesocricetus_auratus
ENSUAMG00000015783	PNLDC1	99	75.651	ENSMICG00000008021	PNLDC1	99	75.651	Microcebus_murinus
ENSUAMG00000015783	PNLDC1	99	73.432	ENSMOCG00000014287	Pnldc1	99	73.432	Microtus_ochrogaster
ENSUAMG00000015783	PNLDC1	99	65.981	ENSMODG00000007420	PNLDC1	97	66.034	Monodelphis_domestica
ENSUAMG00000015783	PNLDC1	99	72.913	MGP_CAROLIEiJ_G0021045	Pnldc1	99	72.913	Mus_caroli
ENSUAMG00000015783	PNLDC1	99	73.985	ENSMUSG00000073460	Pnldc1	99	76.415	Mus_musculus
ENSUAMG00000015783	PNLDC1	99	73.567	MGP_PahariEiJ_G0023361	Pnldc1	99	73.567	Mus_pahari
ENSUAMG00000015783	PNLDC1	99	73.284	MGP_SPRETEiJ_G0021975	Pnldc1	99	73.284	Mus_spretus
ENSUAMG00000015783	PNLDC1	99	81.481	ENSMPUG00000004920	PNLDC1	99	81.481	Mustela_putorius_furo
ENSUAMG00000015783	PNLDC1	99	75.560	ENSMLUG00000000747	PNLDC1	99	75.560	Myotis_lucifugus
ENSUAMG00000015783	PNLDC1	99	73.978	ENSNGAG00000017714	Pnldc1	99	73.978	Nannospalax_galili
ENSUAMG00000015783	PNLDC1	97	72.762	ENSNLEG00000011282	PNLDC1	99	72.762	Nomascus_leucogenys
ENSUAMG00000015783	PNLDC1	61	60.429	ENSMEUG00000011926	-	64	60.429	Notamacropus_eugenii
ENSUAMG00000015783	PNLDC1	53	55.634	ENSMEUG00000014042	-	97	55.634	Notamacropus_eugenii
ENSUAMG00000015783	PNLDC1	80	86.364	ENSOPRG00000003813	PNLDC1	79	86.364	Ochotona_princeps
ENSUAMG00000015783	PNLDC1	99	71.695	ENSODEG00000008047	PNLDC1	99	71.695	Octodon_degus
ENSUAMG00000015783	PNLDC1	99	48.423	ENSOANG00000012199	PNLDC1	99	50.093	Ornithorhynchus_anatinus
ENSUAMG00000015783	PNLDC1	99	74.401	ENSOCUG00000013867	PNLDC1	99	74.401	Oryctolagus_cuniculus
ENSUAMG00000015783	PNLDC1	99	75.185	ENSOGAG00000007331	PNLDC1	99	75.185	Otolemur_garnettii
ENSUAMG00000015783	PNLDC1	99	77.222	ENSOARG00000004585	PNLDC1	99	77.222	Ovis_aries
ENSUAMG00000015783	PNLDC1	99	74.630	ENSPPAG00000026651	PNLDC1	99	74.630	Pan_paniscus
ENSUAMG00000015783	PNLDC1	99	79.592	ENSPPRG00000012854	PNLDC1	99	79.592	Panthera_pardus
ENSUAMG00000015783	PNLDC1	98	77.068	ENSPTIG00000011501	PNLDC1	98	77.068	Panthera_tigris_altaica
ENSUAMG00000015783	PNLDC1	99	74.630	ENSPTRG00000018762	PNLDC1	99	74.630	Pan_troglodytes
ENSUAMG00000015783	PNLDC1	99	75.000	ENSPANG00000022009	PNLDC1	99	75.000	Papio_anubis
ENSUAMG00000015783	PNLDC1	99	73.978	ENSPEMG00000016301	Pnldc1	99	73.978	Peromyscus_maniculatus_bairdii
ENSUAMG00000015783	PNLDC1	80	68.150	ENSPCIG00000023412	PNLDC1	96	68.150	Phascolarctos_cinereus
ENSUAMG00000015783	PNLDC1	99	72.356	ENSPPYG00000017148	PNLDC1	99	72.356	Pongo_abelii
ENSUAMG00000015783	PNLDC1	99	67.351	ENSPCAG00000014169	PNLDC1	99	67.351	Procavia_capensis
ENSUAMG00000015783	PNLDC1	99	74.627	ENSPCOG00000025722	PNLDC1	99	74.627	Propithecus_coquereli
ENSUAMG00000015783	PNLDC1	69	79.420	ENSPVAG00000005325	PNLDC1	70	79.420	Pteropus_vampyrus
ENSUAMG00000015783	PNLDC1	99	73.297	ENSRNOG00000023140	Pnldc1	99	86.164	Rattus_norvegicus
ENSUAMG00000015783	PNLDC1	99	74.815	ENSRBIG00000033806	PNLDC1	99	74.815	Rhinopithecus_bieti
ENSUAMG00000015783	PNLDC1	95	74.175	ENSRROG00000043919	PNLDC1	97	74.175	Rhinopithecus_roxellana
ENSUAMG00000015783	PNLDC1	99	74.074	ENSSBOG00000019135	PNLDC1	99	74.074	Saimiri_boliviensis_boliviensis
ENSUAMG00000015783	PNLDC1	96	65.243	ENSSHAG00000015192	PNLDC1	96	65.286	Sarcophilus_harrisii
ENSUAMG00000015783	PNLDC1	53	55.903	ENSSPUG00000004627	PNLDC1	92	64.115	Sphenodon_punctatus
ENSUAMG00000015783	PNLDC1	96	77.220	ENSSSCG00000004046	PNLDC1	99	77.220	Sus_scrofa
ENSUAMG00000015783	PNLDC1	91	49.091	ENSTGUG00000011418	PNLDC1	99	49.091	Taeniopygia_guttata
ENSUAMG00000015783	PNLDC1	95	64.133	ENSTBEG00000009131	PNLDC1	98	64.133	Tupaia_belangeri
ENSUAMG00000015783	PNLDC1	69	71.467	ENSTTRG00000010409	PNLDC1	70	71.467	Tursiops_truncatus
ENSUAMG00000015783	PNLDC1	95	91.502	ENSUMAG00000011903	PNLDC1	100	91.502	Ursus_maritimus
ENSUAMG00000015783	PNLDC1	96	81.958	ENSVVUG00000006586	PNLDC1	99	81.250	Vulpes_vulpes