EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000016116 (Gene tree)
Gene ID: -
Gene Symbol: DDX28
Alias: FLJ11282|MDDX28
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 1850 bases
Position: chrLZNR01000035.1:444672-446521
Accession: 17330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000020452	DEAD	PF00270.29	1.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000022858	DDX28-201	1850	-	ENSUAMP00000020452	540 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000016116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000016116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000016116	DDX28	71	31.818	ENSUAMG00000015430	DDX59	58	31.818
ENSUAMG00000016116	DDX28	73	30.025	ENSUAMG00000000177	-	57	30.025
ENSUAMG00000016116	DDX28	72	35.714	ENSUAMG00000016382	DDX47	77	35.190
ENSUAMG00000016116	DDX28	59	30.484	ENSUAMG00000024662	DDX24	59	30.484
ENSUAMG00000016116	DDX28	67	30.194	ENSUAMG00000023388	DDX5	55	30.194
ENSUAMG00000016116	DDX28	66	31.006	ENSUAMG00000007290	DDX17	67	31.006

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000016116	DDX28	99	85.316	ENSG00000182810	DDX28	99	85.316	Homo_sapiens
ENSUAMG00000016116	DDX28	94	47.969	ENSAPOG00000000991	ddx28	89	47.969	Acanthochromis_polyacanthus
ENSUAMG00000016116	DDX28	100	95.741	ENSAMEG00000019426	DDX28	100	95.741	Ailuropoda_melanoleuca
ENSUAMG00000016116	DDX28	93	47.767	ENSACIG00000021615	ddx28	90	47.767	Amphilophus_citrinellus
ENSUAMG00000016116	DDX28	94	48.162	ENSAOCG00000004610	ddx28	89	47.195	Amphiprion_ocellaris
ENSUAMG00000016116	DDX28	94	48.162	ENSAPEG00000002143	ddx28	89	47.195	Amphiprion_percula
ENSUAMG00000016116	DDX28	95	49.520	ENSATEG00000018691	ddx28	91	49.520	Anabas_testudineus
ENSUAMG00000016116	DDX28	94	55.750	ENSACAG00000009755	DDX28	94	55.750	Anolis_carolinensis
ENSUAMG00000016116	DDX28	93	47.276	ENSACLG00000012984	ddx28	89	47.276	Astatotilapia_calliptera
ENSUAMG00000016116	DDX28	94	48.960	ENSAMXG00000005878	ddx28	91	48.960	Astyanax_mexicanus
ENSUAMG00000016116	DDX28	99	88.683	ENSBTAG00000004290	DDX28	99	88.683	Bos_taurus
ENSUAMG00000016116	DDX28	98	90.530	ENSCAFG00000020327	DDX28	99	90.530	Canis_familiaris
ENSUAMG00000016116	DDX28	98	90.530	ENSCAFG00020019785	DDX28	99	90.530	Canis_lupus_dingo
ENSUAMG00000016116	DDX28	96	88.654	ENSCHIG00000009658	DDX28	95	88.632	Capra_hircus
ENSUAMG00000016116	DDX28	98	83.523	ENSCPOG00000013746	DDX28	97	83.846	Cavia_porcellus
ENSUAMG00000016116	DDX28	99	83.488	ENSCSAG00000018472	DDX28	99	83.488	Chlorocebus_sabaeus
ENSUAMG00000016116	DDX28	90	58.400	ENSCPBG00000012105	DDX28	88	58.400	Chrysemys_picta_bellii
ENSUAMG00000016116	DDX28	68	40.000	ENSCSAVG00000006341	-	94	38.400	Ciona_savignyi
ENSUAMG00000016116	DDX28	97	83.397	ENSCGRG00001024412	Ddx28	100	83.397	Cricetulus_griseus_chok1gshd
ENSUAMG00000016116	DDX28	94	48.643	ENSCSEG00000011651	ddx28	90	48.256	Cynoglossus_semilaevis
ENSUAMG00000016116	DDX28	96	48.885	ENSCVAG00000004044	ddx28	91	49.806	Cyprinodon_variegatus
ENSUAMG00000016116	DDX28	93	49.804	ENSDARG00000060411	ddx28	89	49.804	Danio_rerio
ENSUAMG00000016116	DDX28	68	88.011	ENSDNOG00000033593	DDX28	99	88.011	Dasypus_novemcinctus
ENSUAMG00000016116	DDX28	99	80.891	ENSDORG00000028868	Ddx28	99	80.891	Dipodomys_ordii
ENSUAMG00000016116	DDX28	88	34.711	FBgn0086130	Dbp21E2	88	34.568	Drosophila_melanogaster
ENSUAMG00000016116	DDX28	99	83.673	ENSETEG00000001062	-	96	85.192	Echinops_telfairi
ENSUAMG00000016116	DDX28	75	43.750	ENSEBUG00000004791	ddx28	76	44.041	Eptatretus_burgeri
ENSUAMG00000016116	DDX28	99	90.167	ENSEASG00005020387	DDX28	99	90.167	Equus_asinus_asinus
ENSUAMG00000016116	DDX28	99	90.724	ENSECAG00000006451	DDX28	99	90.724	Equus_caballus
ENSUAMG00000016116	DDX28	79	77.358	ENSEEUG00000005017	DDX28	96	78.102	Erinaceus_europaeus
ENSUAMG00000016116	DDX28	93	50.000	ENSELUG00000005302	ddx28	95	50.196	Esox_lucius
ENSUAMG00000016116	DDX28	100	90.185	ENSFCAG00000012858	DDX28	100	90.185	Felis_catus
ENSUAMG00000016116	DDX28	94	50.096	ENSFHEG00000012573	ddx28	91	50.096	Fundulus_heteroclitus
ENSUAMG00000016116	DDX28	93	47.002	ENSGMOG00000017045	ddx28	96	46.718	Gadus_morhua
ENSUAMG00000016116	DDX28	94	51.145	ENSGALG00000048700	DDX28	89	51.145	Gallus_gallus
ENSUAMG00000016116	DDX28	93	47.953	ENSGAFG00000009249	ddx28	89	47.953	Gambusia_affinis
ENSUAMG00000016116	DDX28	99	48.080	ENSGACG00000016367	ddx28	94	49.035	Gasterosteus_aculeatus
ENSUAMG00000016116	DDX28	80	58.430	ENSGAGG00000004565	DDX28	94	58.430	Gopherus_agassizii
ENSUAMG00000016116	DDX28	99	85.688	ENSGGOG00000001220	DDX28	99	85.688	Gorilla_gorilla
ENSUAMG00000016116	DDX28	93	49.222	ENSHBUG00000001016	ddx28	90	49.222	Haplochromis_burtoni
ENSUAMG00000016116	DDX28	94	46.304	ENSHCOG00000017590	ddx28	92	46.304	Hippocampus_comes
ENSUAMG00000016116	DDX28	93	49.416	ENSIPUG00000017350	Ddx28	89	49.416	Ictalurus_punctatus
ENSUAMG00000016116	DDX28	99	83.673	ENSSTOG00000002064	DDX28	99	83.673	Ictidomys_tridecemlineatus
ENSUAMG00000016116	DDX28	99	78.743	ENSJJAG00000012460	-	99	78.743	Jaculus_jaculus
ENSUAMG00000016116	DDX28	94	47.776	ENSKMAG00000018183	ddx28	90	47.776	Kryptolebias_marmoratus
ENSUAMG00000016116	DDX28	94	48.062	ENSLBEG00000006072	ddx28	90	47.287	Labrus_bergylta
ENSUAMG00000016116	DDX28	93	53.953	ENSLACG00000005578	DDX28	87	53.953	Latimeria_chalumnae
ENSUAMG00000016116	DDX28	93	52.510	ENSLOCG00000017604	ddx28	90	51.544	Lepisosteus_oculatus
ENSUAMG00000016116	DDX28	99	86.642	ENSLAFG00000031239	DDX28	99	86.642	Loxodonta_africana
ENSUAMG00000016116	DDX28	99	83.117	ENSMMUG00000010836	DDX28	99	83.117	Macaca_mulatta
ENSUAMG00000016116	DDX28	94	47.977	ENSMAMG00000020220	ddx28	90	47.977	Mastacembelus_armatus
ENSUAMG00000016116	DDX28	93	49.416	ENSMZEG00005009292	ddx28	90	49.416	Maylandia_zebra
ENSUAMG00000016116	DDX28	96	73.180	ENSMICG00000012346	-	100	72.828	Microcebus_murinus
ENSUAMG00000016116	DDX28	99	82.375	ENSMOCG00000009815	Ddx28	99	82.375	Microtus_ochrogaster
ENSUAMG00000016116	DDX28	94	49.136	ENSMMOG00000000270	ddx28	91	49.136	Mola_mola
ENSUAMG00000016116	DDX28	96	71.954	ENSMODG00000005303	DDX28	94	71.869	Monodelphis_domestica
ENSUAMG00000016116	DDX28	94	49.133	ENSMALG00000008864	ddx28	90	49.042	Monopterus_albus
ENSUAMG00000016116	DDX28	99	80.891	MGP_CAROLIEiJ_G0031510	Ddx28	99	80.891	Mus_caroli
ENSUAMG00000016116	DDX28	99	81.633	ENSMUSG00000045538	Ddx28	99	81.633	Mus_musculus
ENSUAMG00000016116	DDX28	99	82.189	MGP_PahariEiJ_G0023110	Ddx28	99	82.189	Mus_pahari
ENSUAMG00000016116	DDX28	99	81.447	MGP_SPRETEiJ_G0032628	Ddx28	99	81.447	Mus_spretus
ENSUAMG00000016116	DDX28	75	89.826	ENSMPUG00000006915	DDX28	100	89.826	Mustela_putorius_furo
ENSUAMG00000016116	DDX28	98	84.340	ENSMLUG00000005899	DDX28	98	84.340	Myotis_lucifugus
ENSUAMG00000016116	DDX28	96	82.659	ENSNGAG00000015762	Ddx28	99	82.528	Nannospalax_galili
ENSUAMG00000016116	DDX28	93	49.315	ENSNBRG00000001337	ddx28	91	49.315	Neolamprologus_brichardi
ENSUAMG00000016116	DDX28	93	49.416	ENSONIG00000020597	ddx28	90	49.416	Oreochromis_niloticus
ENSUAMG00000016116	DDX28	55	63.423	ENSOANG00000003551	-	100	63.423	Ornithorhynchus_anatinus
ENSUAMG00000016116	DDX28	99	82.746	ENSOCUG00000023074	DDX28	99	82.746	Oryctolagus_cuniculus
ENSUAMG00000016116	DDX28	99	47.802	ENSORLG00000011968	ddx28	91	49.222	Oryzias_latipes
ENSUAMG00000016116	DDX28	99	47.882	ENSORLG00020001951	ddx28	92	49.027	Oryzias_latipes_hni
ENSUAMG00000016116	DDX28	99	47.514	ENSORLG00015023030	ddx28	92	48.638	Oryzias_latipes_hsok
ENSUAMG00000016116	DDX28	94	48.538	ENSOMEG00000012445	ddx28	90	48.538	Oryzias_melastigma
ENSUAMG00000016116	DDX28	98	83.712	ENSOGAG00000016895	DDX28	100	83.549	Otolemur_garnettii
ENSUAMG00000016116	DDX28	82	84.685	ENSOARG00000003313	DDX28	99	84.685	Ovis_aries
ENSUAMG00000016116	DDX28	99	81.784	ENSPPAG00000036971	DDX28	99	81.784	Pan_paniscus
ENSUAMG00000016116	DDX28	100	91.296	ENSPPRG00000018322	DDX28	100	91.296	Panthera_pardus
ENSUAMG00000016116	DDX28	100	87.778	ENSPTIG00000006444	DDX28	100	87.778	Panthera_tigris_altaica
ENSUAMG00000016116	DDX28	99	85.130	ENSPTRG00000008258	DDX28	99	85.130	Pan_troglodytes
ENSUAMG00000016116	DDX28	94	51.163	ENSPKIG00000021200	ddx28	93	50.775	Paramormyrops_kingsleyae
ENSUAMG00000016116	DDX28	55	62.290	ENSPSIG00000001127	DDX28	97	62.290	Pelodiscus_sinensis
ENSUAMG00000016116	DDX28	92	45.988	ENSPMGG00000007908	ddx28	88	45.988	Periophthalmus_magnuspinnatus
ENSUAMG00000016116	DDX28	99	82.070	ENSPEMG00000003395	Ddx28	99	82.070	Peromyscus_maniculatus_bairdii
ENSUAMG00000016116	DDX28	54	48.814	ENSPMAG00000006983	DDX28	97	48.814	Petromyzon_marinus
ENSUAMG00000016116	DDX28	93	48.549	ENSPFOG00000020838	DDX28	90	48.549	Poecilia_formosa
ENSUAMG00000016116	DDX28	93	48.538	ENSPFOG00000020952	ddx28	89	48.549	Poecilia_formosa
ENSUAMG00000016116	DDX28	93	48.549	ENSPLAG00000016292	ddx28	89	48.549	Poecilia_latipinna
ENSUAMG00000016116	DDX28	93	48.549	ENSPMEG00000011311	ddx28	88	48.549	Poecilia_mexicana
ENSUAMG00000016116	DDX28	93	48.538	ENSPREG00000002899	ddx28	88	48.249	Poecilia_reticulata
ENSUAMG00000016116	DDX28	99	85.130	ENSPPYG00000007481	DDX28	100	85.130	Pongo_abelii
ENSUAMG00000016116	DDX28	99	87.407	ENSPCOG00000024632	DDX28	99	87.407	Propithecus_coquereli
ENSUAMG00000016116	DDX28	93	49.416	ENSPNYG00000018804	ddx28	90	49.416	Pundamilia_nyererei
ENSUAMG00000016116	DDX28	93	51.064	ENSPNAG00000014597	ddx28	94	51.064	Pygocentrus_nattereri
ENSUAMG00000016116	DDX28	99	80.334	ENSRNOG00000019817	Ddx28	99	80.334	Rattus_norvegicus
ENSUAMG00000016116	DDX28	93	50.579	ENSSFOG00015010181	ddx28	92	50.000	Scleropages_formosus
ENSUAMG00000016116	DDX28	90	49.798	ENSSMAG00000006831	ddx28	91	48.790	Scophthalmus_maximus
ENSUAMG00000016116	DDX28	94	47.767	ENSSDUG00000003257	ddx28	89	47.184	Seriola_dumerili
ENSUAMG00000016116	DDX28	94	47.379	ENSSLDG00000004513	ddx28	89	46.796	Seriola_lalandi_dorsalis
ENSUAMG00000016116	DDX28	99	83.488	ENSSARG00000014169	DDX28	99	83.488	Sorex_araneus
ENSUAMG00000016116	DDX28	98	47.866	ENSSPAG00000000988	ddx28	91	49.328	Stegastes_partitus
ENSUAMG00000016116	DDX28	99	88.683	ENSSSCG00000026038	DDX28	99	88.683	Sus_scrofa
ENSUAMG00000016116	DDX28	97	47.148	ENSTRUG00000007815	ddx28	94	47.048	Takifugu_rubripes
ENSUAMG00000016116	DDX28	94	48.425	ENSTNIG00000011352	ddx28	100	48.425	Tetraodon_nigroviridis
ENSUAMG00000016116	DDX28	87	91.284	ENSTBEG00000017695	DDX28	87	91.284	Tupaia_belangeri
ENSUAMG00000016116	DDX28	81	99.089	ENSUMAG00000019200	DDX28	90	99.089	Ursus_maritimus
ENSUAMG00000016116	DDX28	81	88.356	ENSVVUG00000012876	DDX28	87	88.356	Vulpes_vulpes
ENSUAMG00000016116	DDX28	94	49.213	ENSXETG00000005435	ddx28	99	49.213	Xenopus_tropicalis
ENSUAMG00000016116	DDX28	93	48.538	ENSXCOG00000012364	ddx28	90	48.549	Xiphophorus_couchianus
ENSUAMG00000016116	DDX28	93	48.919	ENSXMAG00000019603	ddx28	90	48.919	Xiphophorus_maculatus