EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000016284 (Gene tree)
Gene ID: -
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 5382 bases
Position: chrLZNR01006424.1:216362-221743
Accession: 11164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000020677	LSM	PF01423.22	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000023116	SNRPN-201	864	-	ENSUAMP00000020677	287 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000016284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000016284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000016284	SNRPN	56	96.296	ENSUAMG00000005984	-	78	96.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000016284	SNRPN	78	99.552	ENSG00000128739	SNRPN	96	100.000	Homo_sapiens
ENSUAMG00000016284	SNRPN	78	100.000	ENSAMEG00000007034	SNRPN	91	100.000	Ailuropoda_melanoleuca
ENSUAMG00000016284	SNRPN	89	91.765	ENSANAG00000034241	SNRPN	93	99.552	Aotus_nancymaae
ENSUAMG00000016284	SNRPN	78	99.103	ENSBTAG00000008251	SNRPN	100	99.099	Bos_taurus
ENSUAMG00000016284	SNRPN	78	98.214	ENSCJAG00000042622	-	94	98.214	Callithrix_jacchus
ENSUAMG00000016284	SNRPN	78	99.552	ENSCJAG00000003759	-	93	99.552	Callithrix_jacchus
ENSUAMG00000016284	SNRPN	78	100.000	ENSCAFG00000010127	SNRPN	93	100.000	Canis_familiaris
ENSUAMG00000016284	SNRPN	88	94.841	ENSCAFG00020024075	SNRPN	93	100.000	Canis_lupus_dingo
ENSUAMG00000016284	SNRPN	78	99.107	ENSCHIG00000017477	SNRPN	97	99.107	Capra_hircus
ENSUAMG00000016284	SNRPN	78	99.552	ENSTSYG00000005248	SNRPN	93	99.552	Carlito_syrichta
ENSUAMG00000016284	SNRPN	78	99.552	ENSCAPG00000003047	SNRPN	93	99.552	Cavia_aperea
ENSUAMG00000016284	SNRPN	78	99.552	ENSCPOG00000020270	SNRPN	93	99.552	Cavia_porcellus
ENSUAMG00000016284	SNRPN	78	99.552	ENSCCAG00000024231	SNRPN	93	99.552	Cebus_capucinus
ENSUAMG00000016284	SNRPN	78	99.552	ENSCATG00000032518	SNRPN	93	99.552	Cercocebus_atys
ENSUAMG00000016284	SNRPN	78	99.552	ENSCLAG00000011376	SNRPN	93	99.552	Chinchilla_lanigera
ENSUAMG00000016284	SNRPN	78	99.552	ENSCSAG00000006406	SNRPN	93	99.552	Chlorocebus_sabaeus
ENSUAMG00000016284	SNRPN	78	97.768	ENSCHOG00000001846	SNRPN	84	97.768	Choloepus_hoffmanni
ENSUAMG00000016284	SNRPN	78	99.552	ENSCANG00000041156	SNRPN	93	99.552	Colobus_angolensis_palliatus
ENSUAMG00000016284	SNRPN	78	99.103	ENSCGRG00001004136	Snrpn	93	99.103	Cricetulus_griseus_chok1gshd
ENSUAMG00000016284	SNRPN	78	98.655	ENSCGRG00000001621	Snrpn	93	98.655	Cricetulus_griseus_crigri
ENSUAMG00000016284	SNRPN	58	92.216	ENSCVAG00000014193	SNRPN	67	92.593	Cyprinodon_variegatus
ENSUAMG00000016284	SNRPN	78	98.655	ENSDNOG00000037060	SNRPN	91	98.655	Dasypus_novemcinctus
ENSUAMG00000016284	SNRPN	78	99.103	ENSDORG00000004527	Snrpn	93	99.103	Dipodomys_ordii
ENSUAMG00000016284	SNRPN	78	100.000	ENSEASG00005017871	SNRPN	93	100.000	Equus_asinus_asinus
ENSUAMG00000016284	SNRPN	78	100.000	ENSECAG00000018148	SNRPN	93	100.000	Equus_caballus
ENSUAMG00000016284	SNRPN	78	99.103	ENSEEUG00000007440	-	93	99.103	Erinaceus_europaeus
ENSUAMG00000016284	SNRPN	81	98.707	ENSFCAG00000022298	-	97	98.707	Felis_catus
ENSUAMG00000016284	SNRPN	64	85.792	ENSFDAG00000010528	-	86	83.333	Fukomys_damarensis
ENSUAMG00000016284	SNRPN	78	99.103	ENSFDAG00000016578	-	94	98.661	Fukomys_damarensis
ENSUAMG00000016284	SNRPN	61	74.286	ENSGMOG00000018161	SNRPN	91	72.464	Gadus_morhua
ENSUAMG00000016284	SNRPN	75	73.023	ENSGGOG00000024469	-	92	75.369	Gorilla_gorilla
ENSUAMG00000016284	SNRPN	78	99.552	ENSGGOG00000003988	SNRPN	93	99.552	Gorilla_gorilla
ENSUAMG00000016284	SNRPN	73	80.383	ENSHGLG00000020936	-	85	79.710	Heterocephalus_glaber_female
ENSUAMG00000016284	SNRPN	78	99.552	ENSHGLG00000011924	SNRPN	93	99.552	Heterocephalus_glaber_female
ENSUAMG00000016284	SNRPN	78	85.650	ENSHGLG00000002327	-	93	85.202	Heterocephalus_glaber_female
ENSUAMG00000016284	SNRPN	72	89.855	ENSHGLG00000019812	-	93	91.031	Heterocephalus_glaber_female
ENSUAMG00000016284	SNRPN	78	82.063	ENSHGLG00100004881	-	92	83.408	Heterocephalus_glaber_male
ENSUAMG00000016284	SNRPN	72	89.855	ENSHGLG00100021056	-	93	91.031	Heterocephalus_glaber_male
ENSUAMG00000016284	SNRPN	78	99.552	ENSHGLG00100016559	SNRPN	93	99.552	Heterocephalus_glaber_male
ENSUAMG00000016284	SNRPN	78	99.552	ENSSTOG00000001339	SNRPN	93	99.552	Ictidomys_tridecemlineatus
ENSUAMG00000016284	SNRPN	78	99.103	ENSLAFG00000009458	SNRPN	93	99.103	Loxodonta_africana
ENSUAMG00000016284	SNRPN	82	97.034	ENSMFAG00000042235	SNRPN	97	97.034	Macaca_fascicularis
ENSUAMG00000016284	SNRPN	82	97.034	ENSMMUG00000023139	SNURF	97	97.034	Macaca_mulatta
ENSUAMG00000016284	SNRPN	78	99.552	ENSMNEG00000031291	SNRPN	93	99.552	Macaca_nemestrina
ENSUAMG00000016284	SNRPN	78	99.552	ENSMLEG00000038837	SNRPN	93	99.552	Mandrillus_leucophaeus
ENSUAMG00000016284	SNRPN	72	90.291	ENSMGAG00000008696	SNRPN	93	86.996	Meleagris_gallopavo
ENSUAMG00000016284	SNRPN	78	99.552	ENSMAUG00000000051	Snrpn	97	99.552	Mesocricetus_auratus
ENSUAMG00000016284	SNRPN	78	99.552	ENSMICG00000042356	SNRPN	93	99.552	Microcebus_murinus
ENSUAMG00000016284	SNRPN	78	99.554	ENSMOCG00000015350	Snrpn	95	99.554	Microtus_ochrogaster
ENSUAMG00000016284	SNRPN	75	93.488	ENSMODG00000013926	-	93	93.274	Monodelphis_domestica
ENSUAMG00000016284	SNRPN	78	99.552	MGP_CAROLIEiJ_G0029815	Snrpn	93	99.552	Mus_caroli
ENSUAMG00000016284	SNRPN	78	99.552	ENSMUSG00000102252	Snrpn	93	99.552	Mus_musculus
ENSUAMG00000016284	SNRPN	78	99.552	MGP_PahariEiJ_G0013040	Snrpn	93	99.552	Mus_pahari
ENSUAMG00000016284	SNRPN	78	99.552	MGP_SPRETEiJ_G0030918	Snrpn	93	99.552	Mus_spretus
ENSUAMG00000016284	SNRPN	69	51.515	ENSMPUG00000007115	-	60	73.643	Mustela_putorius_furo
ENSUAMG00000016284	SNRPN	78	100.000	ENSMPUG00000014638	-	93	100.000	Mustela_putorius_furo
ENSUAMG00000016284	SNRPN	71	60.784	ENSMLUG00000025849	-	72	63.462	Myotis_lucifugus
ENSUAMG00000016284	SNRPN	78	99.552	ENSMLUG00000023361	-	91	99.552	Myotis_lucifugus
ENSUAMG00000016284	SNRPN	78	99.552	ENSNGAG00000000181	Snrpn	93	99.552	Nannospalax_galili
ENSUAMG00000016284	SNRPN	78	82.063	ENSNLEG00000001376	SNRPN	92	82.063	Nomascus_leucogenys
ENSUAMG00000016284	SNRPN	78	81.614	ENSODEG00000016065	-	87	82.609	Octodon_degus
ENSUAMG00000016284	SNRPN	78	99.103	ENSODEG00000013478	-	93	99.103	Octodon_degus
ENSUAMG00000016284	SNRPN	78	98.661	ENSODEG00000019708	-	94	98.661	Octodon_degus
ENSUAMG00000016284	SNRPN	78	98.655	ENSODEG00000020110	-	93	98.655	Octodon_degus
ENSUAMG00000016284	SNRPN	78	99.107	ENSOCUG00000003532	-	93	99.107	Oryctolagus_cuniculus
ENSUAMG00000016284	SNRPN	59	91.765	ENSORLG00020007490	SNRPN	67	93.210	Oryzias_latipes_hni
ENSUAMG00000016284	SNRPN	59	91.765	ENSORLG00015003332	SNRPN	67	93.210	Oryzias_latipes_hsok
ENSUAMG00000016284	SNRPN	59	92.353	ENSOMEG00000002066	SNRPN	67	93.827	Oryzias_melastigma
ENSUAMG00000016284	SNRPN	78	99.552	ENSOGAG00000007392	SNRPN	93	99.552	Otolemur_garnettii
ENSUAMG00000016284	SNRPN	78	99.103	ENSOARG00000009080	SNRPN	93	99.103	Ovis_aries
ENSUAMG00000016284	SNRPN	77	71.946	ENSPPAG00000034049	-	86	72.115	Pan_paniscus
ENSUAMG00000016284	SNRPN	82	97.034	ENSPPAG00000027650	SNRPN	97	97.034	Pan_paniscus
ENSUAMG00000016284	SNRPN	78	100.000	ENSPPRG00000019878	-	93	100.000	Panthera_pardus
ENSUAMG00000016284	SNRPN	91	54.406	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSUAMG00000016284	SNRPN	85	97.541	ENSPTIG00000004537	SNRPN	98	97.541	Panthera_tigris_altaica
ENSUAMG00000016284	SNRPN	82	97.034	ENSPTRG00000006826	SNRPN	97	97.034	Pan_troglodytes
ENSUAMG00000016284	SNRPN	77	72.398	ENSPTRG00000052400	-	65	80.986	Pan_troglodytes
ENSUAMG00000016284	SNRPN	78	99.552	ENSPANG00000020142	SNRPN	93	99.552	Papio_anubis
ENSUAMG00000016284	SNRPN	78	99.552	ENSPEMG00000012911	-	93	99.552	Peromyscus_maniculatus_bairdii
ENSUAMG00000016284	SNRPN	72	95.192	ENSPEMG00000020979	-	86	95.169	Peromyscus_maniculatus_bairdii
ENSUAMG00000016284	SNRPN	75	86.047	ENSPEMG00000013920	-	92	86.996	Peromyscus_maniculatus_bairdii
ENSUAMG00000016284	SNRPN	75	94.419	ENSPCIG00000004699	-	71	94.170	Phascolarctos_cinereus
ENSUAMG00000016284	SNRPN	58	92.216	ENSPMEG00000020674	SNRPN	68	93.125	Poecilia_mexicana
ENSUAMG00000016284	SNRPN	78	99.552	ENSPPYG00000006269	SNURF	93	99.552	Pongo_abelii
ENSUAMG00000016284	SNRPN	85	93.033	ENSPCOG00000014231	SNRPN	93	99.552	Propithecus_coquereli
ENSUAMG00000016284	SNRPN	78	99.552	ENSRNOG00000059764	Snrpn	93	99.552	Rattus_norvegicus
ENSUAMG00000016284	SNRPN	78	99.552	ENSRBIG00000041765	SNRPN	93	99.552	Rhinopithecus_bieti
ENSUAMG00000016284	SNRPN	78	99.552	ENSRROG00000035157	SNRPN	93	99.552	Rhinopithecus_roxellana
ENSUAMG00000016284	SNRPN	78	98.655	ENSSBOG00000024929	-	93	98.655	Saimiri_boliviensis_boliviensis
ENSUAMG00000016284	SNRPN	78	99.552	ENSSBOG00000000110	-	93	99.552	Saimiri_boliviensis_boliviensis
ENSUAMG00000016284	SNRPN	75	94.419	ENSSHAG00000010257	-	91	94.170	Sarcophilus_harrisii
ENSUAMG00000016284	SNRPN	78	76.682	ENSSARG00000000072	SNRPN	93	76.682	Sorex_araneus
ENSUAMG00000016284	SNRPN	78	99.552	ENSSSCG00000028124	SNRPN	96	99.550	Sus_scrofa
ENSUAMG00000016284	SNRPN	78	99.103	ENSTTRG00000010966	SNRPN	82	99.103	Tursiops_truncatus
ENSUAMG00000016284	SNRPN	78	100.000	ENSUMAG00000025589	SNRPN	93	100.000	Ursus_maritimus
ENSUAMG00000016284	SNRPN	82	98.298	ENSVVUG00000017971	SNRPN	96	98.298	Vulpes_vulpes