EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000016706 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 7250 bases
Position: chrLZNR01009731.1:76527-83776
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	1	11
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	2	11
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	3	11
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	4	11
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	5	11
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	6	11
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	7	11
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	8	11
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	9	11
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	10	11
ENSUAMP00000021271	zf-C2H2	PF00096.26	2.3e-58	11	11
ENSUAMP00000021271	zf-met	PF12874.7	6.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000023764	-	1806	-	ENSUAMP00000021271	601 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000016706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000016706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000016706	-	94	44.872	ENSUAMG00000000212	-	80	44.872
ENSUAMG00000016706	-	85	40.807	ENSUAMG00000024556	ZNF652	90	41.204
ENSUAMG00000016706	-	93	43.233	ENSUAMG00000019652	-	85	44.173
ENSUAMG00000016706	-	70	50.000	ENSUAMG00000021858	-	62	50.000
ENSUAMG00000016706	-	86	48.689	ENSUAMG00000001062	-	99	48.689
ENSUAMG00000016706	-	91	47.711	ENSUAMG00000014969	ZNF112	76	47.711
ENSUAMG00000016706	-	86	53.670	ENSUAMG00000004882	-	71	53.670
ENSUAMG00000016706	-	89	62.069	ENSUAMG00000027415	-	83	62.069
ENSUAMG00000016706	-	66	37.545	ENSUAMG00000011794	ZNF526	82	36.452
ENSUAMG00000016706	-	93	42.718	ENSUAMG00000017817	-	98	42.718
ENSUAMG00000016706	-	87	36.286	ENSUAMG00000009994	PRDM5	61	41.518
ENSUAMG00000016706	-	89	44.382	ENSUAMG00000010517	-	74	44.382
ENSUAMG00000016706	-	99	42.065	ENSUAMG00000014479	ZNF317	86	42.520
ENSUAMG00000016706	-	97	63.940	ENSUAMG00000028270	-	98	63.940
ENSUAMG00000016706	-	78	38.596	ENSUAMG00000016827	ZNF319	86	34.949
ENSUAMG00000016706	-	93	44.530	ENSUAMG00000012109	ZNF658	83	44.530
ENSUAMG00000016706	-	64	39.815	ENSUAMG00000004622	MAZ	84	39.286
ENSUAMG00000016706	-	85	32.347	ENSUAMG00000023864	ZNF574	94	32.150
ENSUAMG00000016706	-	93	48.641	ENSUAMG00000005458	ZNF235	72	48.641
ENSUAMG00000016706	-	87	48.980	ENSUAMG00000010469	ZNF582	88	48.980
ENSUAMG00000016706	-	91	44.379	ENSUAMG00000013693	ZNF226	80	45.316
ENSUAMG00000016706	-	85	34.323	ENSUAMG00000012111	ZFP64	72	34.323
ENSUAMG00000016706	-	89	47.651	ENSUAMG00000017632	ZFP1	90	47.651
ENSUAMG00000016706	-	99	55.388	ENSUAMG00000005918	-	95	55.388
ENSUAMG00000016706	-	87	30.282	ENSUAMG00000008738	ZNF646	64	30.034
ENSUAMG00000016706	-	69	35.897	ENSUAMG00000019189	GTF3A	73	39.583
ENSUAMG00000016706	-	87	55.263	ENSUAMG00000022172	-	57	50.530
ENSUAMG00000016706	-	99	48.232	ENSUAMG00000013694	ZNF234	93	47.664
ENSUAMG00000016706	-	98	59.392	ENSUAMG00000027384	-	90	65.027
ENSUAMG00000016706	-	98	57.596	ENSUAMG00000027381	-	100	57.596
ENSUAMG00000016706	-	65	36.747	ENSUAMG00000015014	PATZ1	50	31.604
ENSUAMG00000016706	-	93	46.023	ENSUAMG00000026246	ZNF454	85	45.217
ENSUAMG00000016706	-	86	51.394	ENSUAMG00000004827	-	58	51.185
ENSUAMG00000016706	-	69	39.865	ENSUAMG00000015472	ZNF236	70	39.865
ENSUAMG00000016706	-	65	38.286	ENSUAMG00000019888	ZNF784	65	38.272
ENSUAMG00000016706	-	86	49.721	ENSUAMG00000020195	ZNF628	58	49.721
ENSUAMG00000016706	-	89	53.005	ENSUAMG00000027191	-	77	53.005
ENSUAMG00000016706	-	72	33.906	ENSUAMG00000015024	ZNF770	96	32.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000016706	-	98	51.036	ENSTSYG00000003349	-	100	46.272	Carlito_syrichta
ENSUAMG00000016706	-	99	52.374	ENSEASG00005020283	-	90	54.213	Equus_asinus_asinus
ENSUAMG00000016706	-	99	57.701	ENSECAG00000019609	-	94	57.701	Equus_caballus
ENSUAMG00000016706	-	99	53.958	ENSFCAG00000041262	-	93	49.201	Felis_catus
ENSUAMG00000016706	-	100	56.697	ENSFCAG00000044488	-	92	55.593	Felis_catus
ENSUAMG00000016706	-	100	54.688	ENSPTIG00000009310	-	95	51.719	Panthera_tigris_altaica
ENSUAMG00000016706	-	100	51.376	ENSPVAG00000000361	-	96	51.471	Pteropus_vampyrus
ENSUAMG00000016706	-	86	54.577	ENSSSCG00000029696	-	91	54.577	Sus_scrofa
ENSUAMG00000016706	-	99	51.338	ENSTTRG00000008110	-	95	51.338	Tursiops_truncatus
ENSUAMG00000016706	-	99	54.985	ENSTTRG00000014179	-	96	54.985	Tursiops_truncatus